BLASTX nr result

ID: Coptis23_contig00005720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005720
         (855 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABY47652.1| one-helix protein [Ipomoea nil]                        157   4e-36
ref|XP_002307511.1| one helix protein 2 [Populus trichocarpa] gi...   154   2e-35
ref|XP_002300907.1| one helix protein 2 [Populus trichocarpa] gi...   154   2e-35
gb|ACV60362.1| putative one-helix protein [Camellia sinensis]         154   3e-35
ref|XP_003518533.1| PREDICTED: uncharacterized protein LOC100804...   153   5e-35

>gb|ABY47652.1| one-helix protein [Ipomoea nil]
          Length = 165

 Score =  157 bits (396), Expect = 4e-36
 Identities = 79/129 (61%), Positives = 92/129 (71%)
 Frame = -2

Query: 623 IRSSNADGPLRRPVATPPLRQXXXXXXXXXXXXXXXXXXXXXXXTDQSIVTMEFQRKMAK 444
           +RSS A+GP RRPVA  P                           D+S+VT+EFQR+ AK
Sbjct: 37  VRSSQAEGPFRRPVAPSPPTPVKPVPPSPPPSSPPKPAAVAAAVEDKSVVTLEFQRQKAK 96

Query: 443 ELQEYFNQKKLEQADQGPAFGWVAKNEIGNGRWAMFGFAVGMLTEFATGSNFVDQVKILL 264
           ELQEYF QKK E+A+QGP FG++ KNEI NGRWAMFGFAVGMLTE+ATGS+FVDQ+KILL
Sbjct: 97  ELQEYFKQKKAEEANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSDFVDQLKILL 156

Query: 263 SNFGILDLE 237
           SNFGILDLE
Sbjct: 157 SNFGILDLE 165


>ref|XP_002307511.1| one helix protein 2 [Populus trichocarpa]
           gi|222856960|gb|EEE94507.1| one helix protein 2 [Populus
           trichocarpa]
          Length = 188

 Score =  154 bits (389), Expect = 2e-35
 Identities = 83/141 (58%), Positives = 97/141 (68%), Gaps = 12/141 (8%)
 Frame = -2

Query: 623 IRSSNADGPLRRPVATPPLRQXXXXXXXXXXXXXXXXXXXXXXXT------------DQS 480
           IRSS A+GP+RRPVA PPLR+                                    D++
Sbjct: 49  IRSSQAEGPVRRPVA-PPLREPSPPASPSPPLKPVPPSSPSSPVAPPPKPAAKVAVEDKN 107

Query: 479 IVTMEFQRKMAKELQEYFNQKKLEQADQGPAFGWVAKNEIGNGRWAMFGFAVGMLTEFAT 300
           ++T+EFQR+ AKELQEYF QKKLE+ADQGP FG+  KNEI NGRWAMFGFAVGMLTE+AT
Sbjct: 108 VMTLEFQRQKAKELQEYFKQKKLEEADQGPFFGFFGKNEIANGRWAMFGFAVGMLTEYAT 167

Query: 299 GSNFVDQVKILLSNFGILDLE 237
           GS+FVDQVKILLSNFGI+DLE
Sbjct: 168 GSDFVDQVKILLSNFGIIDLE 188


>ref|XP_002300907.1| one helix protein 2 [Populus trichocarpa]
           gi|222842633|gb|EEE80180.1| one helix protein 2 [Populus
           trichocarpa]
          Length = 188

 Score =  154 bits (389), Expect = 2e-35
 Identities = 84/141 (59%), Positives = 96/141 (68%), Gaps = 12/141 (8%)
 Frame = -2

Query: 623 IRSSNADGPLRRPVATPPLR------------QXXXXXXXXXXXXXXXXXXXXXXXTDQS 480
           IRSS A+GP+RRPVA PPLR                                     D++
Sbjct: 49  IRSSQAEGPVRRPVA-PPLRAPSSPAAPSPPLNPVPPPSPSSPVTPPPKPAAQVAVKDKN 107

Query: 479 IVTMEFQRKMAKELQEYFNQKKLEQADQGPAFGWVAKNEIGNGRWAMFGFAVGMLTEFAT 300
           +VT+EFQR+ AKELQEYF +KK E+ADQGP FG+V KNEI NGRWAMFGFAVGMLTE+AT
Sbjct: 108 VVTLEFQRQKAKELQEYFKKKKFEEADQGPFFGFVGKNEIANGRWAMFGFAVGMLTEYAT 167

Query: 299 GSNFVDQVKILLSNFGILDLE 237
           GS+FVDQVKILLSNFGILDLE
Sbjct: 168 GSDFVDQVKILLSNFGILDLE 188


>gb|ACV60362.1| putative one-helix protein [Camellia sinensis]
          Length = 174

 Score =  154 bits (388), Expect = 3e-35
 Identities = 80/131 (61%), Positives = 96/131 (73%), Gaps = 2/131 (1%)
 Frame = -2

Query: 623 IRSSNADGPLRRPVA-TPPLRQXXXXXXXXXXXXXXXXXXXXXXXTD-QSIVTMEFQRKM 450
           IR S +DGPLRRP+A TPP                           + +S++T+EFQR+ 
Sbjct: 44  IRCSQSDGPLRRPLAPTPPTTLKPVPPSRPPPPQPQSPAKPAAVVEEGKSVITLEFQRQK 103

Query: 449 AKELQEYFNQKKLEQADQGPAFGWVAKNEIGNGRWAMFGFAVGMLTEFATGSNFVDQVKI 270
           AKELQ+YF QKKL++ADQGP FG++AKNEI NGRWAMFGFAVGMLTE+ATGS+FVDQVKI
Sbjct: 104 AKELQDYFKQKKLDEADQGPFFGFIAKNEISNGRWAMFGFAVGMLTEYATGSDFVDQVKI 163

Query: 269 LLSNFGILDLE 237
           LLSNFGI+DLE
Sbjct: 164 LLSNFGIVDLE 174


>ref|XP_003518533.1| PREDICTED: uncharacterized protein LOC100804460 isoform 1 [Glycine
           max] gi|356499411|ref|XP_003518534.1| PREDICTED:
           uncharacterized protein LOC100804460 isoform 2 [Glycine
           max]
          Length = 182

 Score =  153 bits (386), Expect = 5e-35
 Identities = 78/140 (55%), Positives = 97/140 (69%), Gaps = 11/140 (7%)
 Frame = -2

Query: 623 IRSSNADGPLRRPVA-----------TPPLRQXXXXXXXXXXXXXXXXXXXXXXXTDQSI 477
           IR+S A+GP+RRPVA            P L++                        D+++
Sbjct: 43  IRNSQAEGPIRRPVAPPIREPSSSSSAPQLQKPTLPSQPPSPSSSPPQKPATVVGDDKNV 102

Query: 476 VTMEFQRKMAKELQEYFNQKKLEQADQGPAFGWVAKNEIGNGRWAMFGFAVGMLTEFATG 297
           +T+EFQR+ AKELQEYF QKKL++ADQGP FG++ KNEI NGRWAMFGFAVG+LTE+ATG
Sbjct: 103 ITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATG 162

Query: 296 SNFVDQVKILLSNFGILDLE 237
           S+FVDQVKILLSNFGI+DLE
Sbjct: 163 SDFVDQVKILLSNFGIVDLE 182


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