BLASTX nr result

ID: Coptis23_contig00005713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005713
         (2352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279972.1| PREDICTED: disease resistance protein At4g27...   310   1e-81
gb|ACP30565.1| disease resistance protein [Brassica rapa subsp. ...   308   6e-81
ref|XP_002283414.1| PREDICTED: probable disease resistance prote...   298   4e-78
emb|CBI24353.3| unnamed protein product [Vitis vinifera]              297   7e-78
ref|XP_002270165.1| PREDICTED: disease resistance protein At4g27...   297   7e-78

>ref|XP_002279972.1| PREDICTED: disease resistance protein At4g27190 [Vitis vinifera]
          Length = 989

 Score =  310 bits (793), Expect = 1e-81
 Identities = 194/611 (31%), Positives = 328/611 (53%), Gaps = 23/611 (3%)
 Frame = -3

Query: 2185 SKYTNIKKEISRAEEYRKRPREE---------VLFWLEDIVRIKEKVNAIERSFIAGNTR 2033
            S + +++K++   ++ R +   E         V  WL ++  I+++VN++ +S  A N +
Sbjct: 35   SNFNDLEKKLELLKDVRYKMENELDDSVSMPKVTGWLTEVEGIQDEVNSVLQSIAANNKK 94

Query: 2032 SFSRCSPRRSYSKVIKQLTKEVDQLQETSKFSDGLVVSDELLGNSVGAAPTLVGNSIQRV 1853
               RC    S  +  ++L K ++++Q   K  +  ++S         A   + G S++  
Sbjct: 95   ---RCGGFFSCCQWSRELAKTLEKVQMLQKEGNS-IISMAAANRKAHAVEHMPGPSVENQ 150

Query: 1852 ------LDEIWKGLMDSTXXXXXXXXXXXXGKTATMMSINNRL---ATNKIFTKIIWVTF 1700
                  L  I   L D              GKT  + ++NN+L   ++ + F  +IWVT 
Sbjct: 151  STASQNLARIMDLLNDDGVKSIGVWGMGGVGKTTLVKNLNNKLENASSAQPFGVVIWVTV 210

Query: 1699 SKDLSLEKVQNDIAMQLNVYLPTYEKKISSSARLLESLNKVKKLLVIFDDMWEPISLEKV 1520
            SKDL L ++Q  IA +LNV +   E   S + +L   L +  K L+I DD+W+ I L+ +
Sbjct: 211  SKDLDLRRIQMQIAHRLNVEVKMEESTESLAVKLFRRLKRTGKFLLILDDVWKGIDLDAL 270

Query: 1519 GIPLPQTKKDCKIVLTTRSRDICSQMKTDKYIEIKVLSENEAWDLFVSKAGGKVLAPDVQ 1340
            G+P P+    CKI++TTR  D+C QMK DK +++++L+ +EAW+LF   AG       ++
Sbjct: 271  GVPRPEVHTGCKIIITTRFLDVCRQMKIDKRVKVQILNYDEAWELFCQNAGEVATLKPIK 330

Query: 1339 PIAIQMVRKCDYLPILIISLGHAMQDEVKIEVWMKASKEL-SSSVTMVHGWEEKNLQLLR 1163
            P+A  + +KCD LP+ II +  +M+ + K+E+W  A  EL +S    + G E++  ++L+
Sbjct: 331  PLAETVTKKCDGLPLAIIIMATSMRGKKKVELWKDALNELQNSQPENIPGIEDQVYRVLK 390

Query: 1162 FSYSRLKNDEVRQCFLYCAFFPEDYLFEPNELIRYWIAEHFISDHTYMVTQIDEGLEILK 983
            +SY  L+   ++ CFL+C+ FPED+  + +EL +YW+AE  I +H       + G  + +
Sbjct: 391  WSYDSLQGKNMKSCFLFCSLFPEDFSIDISELTKYWLAEGLIDEHQTYDNIHNRGFAVAE 450

Query: 982  ELKDASMLEIFTKRGHERLKMHDLFRDLA---ANIVRDEPGFLVKAGLGLKEPPYFWEWA 812
             LKD  +LE    +    +KMHD+ RD+A   A+ +      LV++G+ L++        
Sbjct: 451  YLKDCCLLEDGDPK-ETTVKMHDVVRDVAIWIASSLEHGCKSLVRSGIRLRKVSESEMLK 509

Query: 811  DSTKISLIRNRINILDDLDYHCPNVSTLLLQDN-PLSLISPTFFNPMSALQILDISYSGI 635
               +IS + N I  L D    C   +TLLLQ N PL  +   F     AL++L++  + I
Sbjct: 510  LVKRISYMNNEIERLPDCPISCSEATTLLLQGNSPLERVPEGFLLGFPALRVLNLGETKI 569

Query: 634  KELPSSLCRLANLHVLFLQHCRSLKKIPSLEYLKELQILSLRGTFIKELPHGIKELVSLR 455
            + LP SL +   L  L L+ C SL+++PSL  L+ LQ+L    T +KELP G+++L  LR
Sbjct: 570  QRLPHSLLQQGELRALILRQCSSLEELPSLGGLRRLQVLDCSCTDLKELPEGMEQLSCLR 629

Query: 454  SLDLSETTKLE 422
             L+LS T +L+
Sbjct: 630  VLNLSYTKQLQ 640


>gb|ACP30565.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1009

 Score =  308 bits (788), Expect = 6e-81
 Identities = 221/687 (32%), Positives = 352/687 (51%), Gaps = 20/687 (2%)
 Frame = -3

Query: 2266 VCKSVH*---YRLSQEDKMDNLRWKCNVLNSKYTNIKKEISRAEEYRKRPREEVLFWLED 2096
            +C+S +    Y +  +  +  L    N L      ++K++   E   K    ++  WL +
Sbjct: 19   ICRSTYTRAIYTIRFKSNIKALNKALNGLVDVQNKVEKDLKTLEIKGKSLNVQLRRWLRE 78

Query: 2095 IVRIKEKVNAIERSFIAGNTRSFSRCSPRRSYSKV---IKQLTKEVDQLQETSKFSDGLV 1925
            +  I  + N+I+      +     RC   +    V   +K+L K+   L +        V
Sbjct: 79   VEEIGSEANSIQEG--RASCALSLRCKMSKKLMGVLDKVKKLQKQGLDLLDIFSLEGRSV 136

Query: 1924 VSDELLGNSVGAAPTLVGNSIQRVLDEIWKGLMDSTXXXXXXXXXXXXGKTATMMSINNR 1745
            + + +LG S+    T+    + +VL      LM               GKT  +  +NN+
Sbjct: 137  LVERILGPSI-TDQTIASEMLVKVLS----CLMSDDVQKVGIWGIGGVGKTTLVRELNNK 191

Query: 1744 L---ATNKIFTKIIWVTFSKDLSLEKVQNDIAMQLNVYLPTYEKKISSSARLLESLNKVK 1574
            L   A  + F  +IWVT SK+    +VQ  IA +L++ +   E +   + R+   L  V 
Sbjct: 192  LWKEADTQPFGMVIWVTVSKEFDSGRVQKQIAERLDMEIRLGESEERLARRIYGKLENVS 251

Query: 1573 KLLVIFDDMWEPISLEKVGIPLPQTKKDCKIVLTTRSRDICSQMKTDKYIEIKVLSENEA 1394
              L+I DD+W+ I L+K+GIP     KD KIVLT+R  ++C  +KTD    +  L E EA
Sbjct: 252  SFLLILDDVWKSIDLDKLGIPQTDGHKDRKIVLTSRYLEVCQSIKTDIDFRVNYLCEEEA 311

Query: 1393 WDLFVSKAGGKVLAPDVQPIAIQMVRKCDYLPILIISLGHAMQDEVKIEVWMKASKELSS 1214
            W++F   AG       V+PIA ++ R+C  LP+ I+++G AM+ + K+ +W  A +EL  
Sbjct: 312  WEMFCKNAGEVTRLDRVRPIAKEVSRECGGLPLAIVTVGMAMRGKKKVNLWKHALEELKC 371

Query: 1213 SVTMVHGWEEKNLQLLRFSYSRLKNDEVRQCFLYCAFFPEDYLFEPNELIRYWIAEHFIS 1034
            SV  V   EEK  Q L++SY+ L+  +++ CFL+CA FPEDY  E +EL+RYWIAE FI 
Sbjct: 372  SVPYVKSIEEKVYQPLKWSYNLLE-PKMKSCFLFCALFPEDYSIEVSELVRYWIAEGFID 430

Query: 1033 DHTYMVTQIDEGLEILKELKDASMLEIFTKRGH-ERLKMHDLFRDLAANIV---RDEPGF 866
            +       +++G+ +++ LKD+ +LE   +  H + +KMHD+ RD A  ++   +D+   
Sbjct: 431  ETQNYSYLMNQGITLVENLKDSCLLE---EGSHGDTVKMHDVVRDFAIWVMSSSQDDSHS 487

Query: 865  LVKAGLGLKEPPYFWEWADSTKISLIRNRINILDDLDYHCPNVSTLLLQDN-PLSLISPT 689
            LV +G+GL E P+        ++SL+ N++  L +    C  +STLLLQ N  L  +   
Sbjct: 488  LVMSGIGLCEFPHEKFVPSIRRVSLMNNKLKRLSNQVVECVELSTLLLQGNFHLKELPEG 547

Query: 688  FFNPMSALQILDISYSGIKELPSSLCRLANLHVLFLQHCRSLKKIPSLEYLKELQILSLR 509
            F     AL+IL++S + I+ LP+SL +L  L  L L+    L+++PSLE L ++QIL L 
Sbjct: 548  FLISFPALRILNLSGTCIRSLPNSLNKLHELRSLILRDYYYLEEVPSLEGLAKIQILDLC 607

Query: 508  GTFIKELPHGIKELVSLRSLDLSETTKLEYIHVXXXXXXXXXXXXXXXXSHFF------T 347
             T I+E P G++ L SLR LDLS T  LE I                  SHF       T
Sbjct: 608  ATRIRETPRGLETLNSLRLLDLSRTHHLESIPEGIIGQLSSLEVLDMTLSHFHWGVQGQT 667

Query: 346  MESPLVTNCIKELRCLKRLEILTLSTV 266
             E       ++E+  L+RL +L++  V
Sbjct: 668  QEGQAT---LEEIARLQRLSVLSIRVV 691


>ref|XP_002283414.1| PREDICTED: probable disease resistance protein At4g27220-like [Vitis
            vinifera]
          Length = 1016

 Score =  298 bits (763), Expect = 4e-78
 Identities = 203/601 (33%), Positives = 324/601 (53%), Gaps = 15/601 (2%)
 Frame = -3

Query: 2212 LRWKCNVLNSKYTNIKKEISRAEEYRKRPREEVLFWLEDIVRIKEKVNAIERSFIAGNTR 2033
            L+ K   L S+  ++K E+  A+  RK+ ++EV  WL+++  +K+ +  +E+    G  R
Sbjct: 38   LKEKMERLKSREQDVKIELQNAQYQRKKEKKEVENWLKEVQNMKDDLERMEQE--VGKGR 95

Query: 2032 SFSRCSPRRSYSKVIKQLTKEVDQLQETSKFSDGLVVS---DELLGNSVGAAPTLVGNSI 1862
             FSR    R   + I++    VD+L E  +F +G+++    DE  G ++     +   + 
Sbjct: 96   IFSRLGFLRQSEEHIEK----VDELLERGRFPEGILIDVLRDE--GRALLTTQLIGETTT 149

Query: 1861 QRVLDEIWKGLMDSTXXXXXXXXXXXXGKTATMMSINNRLATNK-IFTKIIWVTFSKDLS 1685
            +R L++IW  L                GKT  +  I+N L   K  F  + WVT SKD S
Sbjct: 150  KRNLEKIWTCLEKGEIQSIGVWGMGGIGKTTIVTHIHNLLLEKKDTFGLVYWVTVSKDSS 209

Query: 1684 LEKVQNDIAMQLNVYLPTYEKKISSSARLLESLNKVKKLLVIFDDMWEPISLEKVGIPLP 1505
            + K+Q+ IA ++N+ L   E +   SA L E+L K KK ++IFDD+WE     +VGIP+ 
Sbjct: 210  VRKLQDVIAEKINLDLSKEEDERLRSALLFEALQKEKKFVLIFDDVWEVYPPREVGIPIG 269

Query: 1504 QTKKDCKIVLTTRSRDICSQMKTDKYIEIKVLSENEAWDLFVSKAGG-KVLAPDVQPIAI 1328
              +   K+++TTRSR++C +M   + I+++ L E EAW+LF         L+   + IA 
Sbjct: 270  VDRG--KLIITTRSREVCLKMGCKEIIKVEPLYEEEAWELFNKTLERYNALSQKEEKIAK 327

Query: 1327 QMVRKCDYLPILIISLGHAMQDEVKIEVWMKASKELSSSVT-MVHGWEEKNLQLLRFSYS 1151
             +VR+C  LP+ I++   +M     I  W  A  EL   V       E    ++L FSY+
Sbjct: 328  DIVRECAGLPLAIVTTARSMSVAYDIAEWRNALNELREHVKGHTINMENDVFKILEFSYN 387

Query: 1150 RLKNDEVRQCFLYCAFFPEDYLFEPNELIRYWIAEHFISDHTYMVTQIDEGLEILKELKD 971
            RL ++++++C LYCA FPEDY      LIRYWIAE  I +      + D G  IL +L++
Sbjct: 388  RLNDEKLQECLLYCALFPEDYKIRRVLLIRYWIAEGLIEEMGSRQAERDRGHAILNKLEN 447

Query: 970  ASMLEIFTKRGHERLKMHDLFRDLAANIVRDEPGFLVKAGLGLKEPPYFWEWADST-KIS 794
              +LE       + +KMHD+ RD+A NI R    F+VK    L++ P   EW+++  ++S
Sbjct: 448  VCLLE--KCENGKCVKMHDVIRDMAINITRKNSRFMVKTRRNLEDLPNEIEWSNNVERVS 505

Query: 793  LIRNRINILDDLDYHCPNVSTLLLQDNPLSL--------ISPTFFNPMSALQILDISYSG 638
            L+ + ++ L  +  +CP +STL LQ    S         +  +FF  M +L++LD+S + 
Sbjct: 506  LMDSHLSTLMFVP-NCPKLSTLFLQKPKFSYPPKGLHEGLPNSFFVHMLSLRVLDLSCTN 564

Query: 637  IKELPSSLCRLANLHVLFLQHCRSLKKIPSLEYLKELQILSLRGTFIKELPHGIKELVSL 458
            I  LP S+  + NL  L L  CR LK++ SL  LKEL+ L L    ++ +P+GI+ELV L
Sbjct: 565  IALLPDSIYDMVNLRALILCECRELKQVGSLAKLKELRELDLSWNEMETIPNGIEELVLL 624

Query: 457  R 455
            +
Sbjct: 625  K 625


>emb|CBI24353.3| unnamed protein product [Vitis vinifera]
          Length = 1195

 Score =  297 bits (761), Expect = 7e-78
 Identities = 193/585 (32%), Positives = 318/585 (54%), Gaps = 19/585 (3%)
 Frame = -3

Query: 2119 EVLFWLEDIVRIKEKVNAIERSFIAGNTRS---FSRCSPRRSYSKVIKQLTKEVDQLQET 1949
            +V  WL+++  ++ +VN+++    A N RS   F  CS    ++K + Q  K+V +L++ 
Sbjct: 63   QVSEWLKEVEELECEVNSMQEGIAASNERSGRGFLNCS---LHNKELVQRLKKVQRLRKV 119

Query: 1948 SKFSDGLVVSDELL-------GNSVGAAPTLVGNSIQRVLDEIWKGLMDSTXXXXXXXXX 1790
               S  +V +  L        G S+    T   N     L +I   L D           
Sbjct: 120  GT-SISMVAAHRLARRVEHIPGPSIECQATATQN-----LAKIMSLLNDDGVGRIGVWGM 173

Query: 1789 XXXGKTATMMSINNRL---ATNKIFTKIIWVTFSKDLSLEKVQNDIAMQLNVYLPTYEKK 1619
               GKT  + ++NN+L   ++ + F  +IW+T SK++ L+++Q  IA +LN+ +   E  
Sbjct: 174  GGVGKTTLVKNLNNKLRDASSTQSFGIVIWITVSKEMDLKRIQVQIAQRLNMAVDMDETT 233

Query: 1618 ISSSARLLESLNKVKKLLVIFDDMWEPISLEKVGIPLPQTKKDCKIVLTTRSRDICSQMK 1439
               + +L   L K  K L+IFDD+W+ I L+ +G+P P+    CKIVLTTRS D+C  M+
Sbjct: 234  ERMAIKLFHRLKKENKFLLIFDDVWKGIHLDSLGVPQPEDHVGCKIVLTTRSLDVCRVMR 293

Query: 1438 TDKYIEIKVLSENEAWDLFVSKAGGKVLAPDVQPIAIQMVRKCDYLPILIISLGHAMQDE 1259
            TD  + + VL+++EAW+LF    G       ++P+A  + ++C  LP+ II +G +M+ +
Sbjct: 294  TDVDVRVDVLNDSEAWNLFCQNVGDVASLQHIKPLAEAVAKECGGLPLAIIVMGTSMRGK 353

Query: 1258 VKIEVWMKASKELSSSVTM-VHGWEEKNLQLLRFSYSRLKNDEVRQCFLYCAFFPEDYLF 1082
              +E+W  A  EL  S+   + G E++  + L++SY  L+   ++ CFLYC+ FPED+  
Sbjct: 354  TMVELWEDALNELQQSLPCNIQGIEDEVYKPLKWSYDLLQGKNIKSCFLYCSLFPEDFSI 413

Query: 1081 EPNELIRYWIAEHFISDHTYMVTQIDEGLEILKELKDASMLEIFTKRGHERLKMHDLFRD 902
            E +EL++ W+AE  +          +  L +++ LK+  +LE     G   +KMHD+ RD
Sbjct: 414  EISELVQCWLAEGLLDSQQNYRDAQNRALALIENLKNCCLLEPGDSTG--TVKMHDVVRD 471

Query: 901  LA---ANIVRDEPGFLVKAGLGLKEPPYFWEWADSTK-ISLIRNRINILDDLDYHCPNVS 734
            +A   ++ + D   FLV++G+ L E P   E ++S K +S + N I  L      C   S
Sbjct: 472  VAIWISSSLSDGCKFLVRSGIRLTEIPMV-ELSNSLKRVSFMNNVITELPAGGIECLEAS 530

Query: 733  TLLLQDN-PLSLISPTFFNPMSALQILDISYSGIKELPSSLCRLANLHVLFLQHCRSLKK 557
            TL LQ N  L +I   F      L++L++  + I+ LPSSL  L+ L  L L+ C  L++
Sbjct: 531  TLFLQGNQTLVMIPEGFLVGFQQLRVLNLCGTQIQRLPSSLLHLSELRALLLKDCTCLEE 590

Query: 556  IPSLEYLKELQILSLRGTFIKELPHGIKELVSLRSLDLSETTKLE 422
            +P L  L +LQ+L    T IKELP G+++L +LR L+LS T +L+
Sbjct: 591  LPPLGGLSQLQLLDCDSTAIKELPQGMEQLSNLRELNLSRTKQLK 635


>ref|XP_002270165.1| PREDICTED: disease resistance protein At4g27190-like [Vitis vinifera]
          Length = 982

 Score =  297 bits (761), Expect = 7e-78
 Identities = 193/585 (32%), Positives = 318/585 (54%), Gaps = 19/585 (3%)
 Frame = -3

Query: 2119 EVLFWLEDIVRIKEKVNAIERSFIAGNTRS---FSRCSPRRSYSKVIKQLTKEVDQLQET 1949
            +V  WL+++  ++ +VN+++    A N RS   F  CS    ++K + Q  K+V +L++ 
Sbjct: 63   QVSEWLKEVEELECEVNSMQEGIAASNERSGRGFLNCS---LHNKELVQRLKKVQRLRKV 119

Query: 1948 SKFSDGLVVSDELL-------GNSVGAAPTLVGNSIQRVLDEIWKGLMDSTXXXXXXXXX 1790
               S  +V +  L        G S+    T   N     L +I   L D           
Sbjct: 120  GT-SISMVAAHRLARRVEHIPGPSIECQATATQN-----LAKIMSLLNDDGVGRIGVWGM 173

Query: 1789 XXXGKTATMMSINNRL---ATNKIFTKIIWVTFSKDLSLEKVQNDIAMQLNVYLPTYEKK 1619
               GKT  + ++NN+L   ++ + F  +IW+T SK++ L+++Q  IA +LN+ +   E  
Sbjct: 174  GGVGKTTLVKNLNNKLRDASSTQSFGIVIWITVSKEMDLKRIQVQIAQRLNMAVDMDETT 233

Query: 1618 ISSSARLLESLNKVKKLLVIFDDMWEPISLEKVGIPLPQTKKDCKIVLTTRSRDICSQMK 1439
               + +L   L K  K L+IFDD+W+ I L+ +G+P P+    CKIVLTTRS D+C  M+
Sbjct: 234  ERMAIKLFHRLKKENKFLLIFDDVWKGIHLDSLGVPQPEDHVGCKIVLTTRSLDVCRVMR 293

Query: 1438 TDKYIEIKVLSENEAWDLFVSKAGGKVLAPDVQPIAIQMVRKCDYLPILIISLGHAMQDE 1259
            TD  + + VL+++EAW+LF    G       ++P+A  + ++C  LP+ II +G +M+ +
Sbjct: 294  TDVDVRVDVLNDSEAWNLFCQNVGDVASLQHIKPLAEAVAKECGGLPLAIIVMGTSMRGK 353

Query: 1258 VKIEVWMKASKELSSSVTM-VHGWEEKNLQLLRFSYSRLKNDEVRQCFLYCAFFPEDYLF 1082
              +E+W  A  EL  S+   + G E++  + L++SY  L+   ++ CFLYC+ FPED+  
Sbjct: 354  TMVELWEDALNELQQSLPCNIQGIEDEVYKPLKWSYDLLQGKNIKSCFLYCSLFPEDFSI 413

Query: 1081 EPNELIRYWIAEHFISDHTYMVTQIDEGLEILKELKDASMLEIFTKRGHERLKMHDLFRD 902
            E +EL++ W+AE  +          +  L +++ LK+  +LE     G   +KMHD+ RD
Sbjct: 414  EISELVQCWLAEGLLDSQQNYRDAQNRALALIENLKNCCLLEPGDSTG--TVKMHDVVRD 471

Query: 901  LA---ANIVRDEPGFLVKAGLGLKEPPYFWEWADSTK-ISLIRNRINILDDLDYHCPNVS 734
            +A   ++ + D   FLV++G+ L E P   E ++S K +S + N I  L      C   S
Sbjct: 472  VAIWISSSLSDGCKFLVRSGIRLTEIPMV-ELSNSLKRVSFMNNVITELPAGGIECLEAS 530

Query: 733  TLLLQDN-PLSLISPTFFNPMSALQILDISYSGIKELPSSLCRLANLHVLFLQHCRSLKK 557
            TL LQ N  L +I   F      L++L++  + I+ LPSSL  L+ L  L L+ C  L++
Sbjct: 531  TLFLQGNQTLVMIPEGFLVGFQQLRVLNLCGTQIQRLPSSLLHLSELRALLLKDCTCLEE 590

Query: 556  IPSLEYLKELQILSLRGTFIKELPHGIKELVSLRSLDLSETTKLE 422
            +P L  L +LQ+L    T IKELP G+++L +LR L+LS T +L+
Sbjct: 591  LPPLGGLSQLQLLDCDSTAIKELPQGMEQLSNLRELNLSRTKQLK 635


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