BLASTX nr result
ID: Coptis23_contig00005695
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00005695 (776 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK27134.1| unknown [Picea sitchensis] 194 1e-47 ref|XP_004142774.1| PREDICTED: mitochondrial inner membrane prot... 194 2e-47 ref|XP_002300068.1| predicted protein [Populus trichocarpa] gi|2... 194 2e-47 ref|NP_566205.1| ku70-binding-like protein [Arabidopsis thaliana... 194 2e-47 ref|XP_002269112.1| PREDICTED: mitochondrial inner membrane prot... 192 9e-47 >gb|ABK27134.1| unknown [Picea sitchensis] Length = 197 Score = 194 bits (494), Expect = 1e-47 Identities = 96/154 (62%), Positives = 106/154 (68%), Gaps = 1/154 (0%) Frame = -3 Query: 459 IAGGYLRGRGIIVCSNHMTFQDEVNQVVIHELIHAYDDCRAKNLDWTXXXXXXXXXXXXX 280 I+GGYLR GI+VCSNHMTFQDEV+QV+IHELIHAYDDCRA NLDWT Sbjct: 70 ISGGYLREEGILVCSNHMTFQDEVDQVIIHELIHAYDDCRAANLDWT------------- 116 Query: 279 XXXXXXXXXXXXXXXXXXXXXXXNCAHHACSEIRAGHLSGDCHYKRELLRGIMKLRGQEQ 100 NCAHHACSEIRAGHLSGDCHYKRELLRG + LRG EQ Sbjct: 117 -----------------------NCAHHACSEIRAGHLSGDCHYKRELLRGFVSLRGHEQ 153 Query: 99 ECIKRRVMQSLKCNPNCG-AAAKDAMDAVWDICY 1 EC+KRRV++S+ NP+C AAK AMDAVWDICY Sbjct: 154 ECVKRRVLKSVYANPHCSEEAAKQAMDAVWDICY 187 >ref|XP_004142774.1| PREDICTED: mitochondrial inner membrane protease ATP23-like [Cucumis sativus] gi|449483813|ref|XP_004156699.1| PREDICTED: mitochondrial inner membrane protease ATP23-like [Cucumis sativus] Length = 195 Score = 194 bits (493), Expect = 2e-47 Identities = 96/154 (62%), Positives = 105/154 (68%), Gaps = 1/154 (0%) Frame = -3 Query: 459 IAGGYLRGRGIIVCSNHMTFQDEVNQVVIHELIHAYDDCRAKNLDWTXXXXXXXXXXXXX 280 I+GGY+RG GI+VCSNHM QDEVNQVVIHELIHA+DDCRA NLDW Sbjct: 68 ISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWA------------- 114 Query: 279 XXXXXXXXXXXXXXXXXXXXXXXNCAHHACSEIRAGHLSGDCHYKRELLRGIMKLRGQEQ 100 NC HHACSEIRAGHLSGDCHYKRELLRG MKLRG EQ Sbjct: 115 -----------------------NCTHHACSEIRAGHLSGDCHYKRELLRGFMKLRGHEQ 151 Query: 99 ECIKRRVMQSLKCNPNC-GAAAKDAMDAVWDICY 1 EC++RRVM+SL NP C AAAKDAM+AVWD+CY Sbjct: 152 ECVRRRVMKSLVANPYCPEAAAKDAMEAVWDVCY 185 >ref|XP_002300068.1| predicted protein [Populus trichocarpa] gi|222847326|gb|EEE84873.1| predicted protein [Populus trichocarpa] Length = 187 Score = 194 bits (492), Expect = 2e-47 Identities = 96/154 (62%), Positives = 106/154 (68%), Gaps = 1/154 (0%) Frame = -3 Query: 459 IAGGYLRGRGIIVCSNHMTFQDEVNQVVIHELIHAYDDCRAKNLDWTXXXXXXXXXXXXX 280 IAGGY+RG GI+VCSNHM QD+VNQVVIHELIHAYDDCRA NLDW Sbjct: 60 IAGGYVRGEGIMVCSNHMNTQDDVNQVVIHELIHAYDDCRAANLDWA------------- 106 Query: 279 XXXXXXXXXXXXXXXXXXXXXXXNCAHHACSEIRAGHLSGDCHYKRELLRGIMKLRGQEQ 100 +CAHHACSEIRAGHLSGDCHYKRELLRG MKLRG EQ Sbjct: 107 -----------------------DCAHHACSEIRAGHLSGDCHYKRELLRGYMKLRGHEQ 143 Query: 99 ECIKRRVMQSLKCNPNCG-AAAKDAMDAVWDICY 1 +C+KRRVM+S+ NP C AAAKDAM+AVWD+CY Sbjct: 144 DCVKRRVMKSMIANPYCSKAAAKDAMEAVWDVCY 177 >ref|NP_566205.1| ku70-binding-like protein [Arabidopsis thaliana] gi|6017109|gb|AAF01592.1|AC009895_13 hypothetical protein [Arabidopsis thaliana] gi|13877935|gb|AAK44045.1|AF370230_1 unknown protein [Arabidopsis thaliana] gi|16323466|gb|AAL15227.1| unknown protein [Arabidopsis thaliana] gi|332640421|gb|AEE73942.1| ku70-binding-like protein [Arabidopsis thaliana] Length = 194 Score = 194 bits (492), Expect = 2e-47 Identities = 96/154 (62%), Positives = 107/154 (69%), Gaps = 1/154 (0%) Frame = -3 Query: 459 IAGGYLRGRGIIVCSNHMTFQDEVNQVVIHELIHAYDDCRAKNLDWTXXXXXXXXXXXXX 280 +AGGY +GRGI VCSN++T QDEVNQVVIHELIHAYD+CRAKNLDWT Sbjct: 67 VAGGYTKGRGITVCSNYLTIQDEVNQVVIHELIHAYDECRAKNLDWT------------- 113 Query: 279 XXXXXXXXXXXXXXXXXXXXXXXNCAHHACSEIRAGHLSGDCHYKRELLRGIMKLRGQEQ 100 NCAHHACSEIRAGHLSGDCH+KRELLRG +KLRG EQ Sbjct: 114 -----------------------NCAHHACSEIRAGHLSGDCHFKRELLRGFIKLRGHEQ 150 Query: 99 ECIKRRVMQSLKCNPNCG-AAAKDAMDAVWDICY 1 ECIKRRV++SL+ NP C AAKDAM+AVWD CY Sbjct: 151 ECIKRRVLKSLRGNPYCSEVAAKDAMEAVWDTCY 184 >ref|XP_002269112.1| PREDICTED: mitochondrial inner membrane protease ATP23 [Vitis vinifera] gi|296081332|emb|CBI17714.3| unnamed protein product [Vitis vinifera] Length = 195 Score = 192 bits (487), Expect = 9e-47 Identities = 92/154 (59%), Positives = 106/154 (68%), Gaps = 1/154 (0%) Frame = -3 Query: 459 IAGGYLRGRGIIVCSNHMTFQDEVNQVVIHELIHAYDDCRAKNLDWTXXXXXXXXXXXXX 280 ++GGY RG GI+VCSNHM QDEVNQVVIHELIHAYDDCRA NLDWT Sbjct: 68 VSGGYARGEGIVVCSNHMNIQDEVNQVVIHELIHAYDDCRAANLDWT------------- 114 Query: 279 XXXXXXXXXXXXXXXXXXXXXXXNCAHHACSEIRAGHLSGDCHYKRELLRGIMKLRGQEQ 100 NCAHHACSEIR+GHLSGDCH+KRELLRG +K+RG Q Sbjct: 115 -----------------------NCAHHACSEIRSGHLSGDCHFKRELLRGYLKVRGHGQ 151 Query: 99 ECIKRRVMQSLKCNPNCG-AAAKDAMDAVWDICY 1 EC++RRVM+S+ NP+C AAAKDAM+AVWD+CY Sbjct: 152 ECVRRRVMKSVTANPHCSEAAAKDAMEAVWDVCY 185