BLASTX nr result

ID: Coptis23_contig00005695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005695
         (776 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK27134.1| unknown [Picea sitchensis]                             194   1e-47
ref|XP_004142774.1| PREDICTED: mitochondrial inner membrane prot...   194   2e-47
ref|XP_002300068.1| predicted protein [Populus trichocarpa] gi|2...   194   2e-47
ref|NP_566205.1| ku70-binding-like protein [Arabidopsis thaliana...   194   2e-47
ref|XP_002269112.1| PREDICTED: mitochondrial inner membrane prot...   192   9e-47

>gb|ABK27134.1| unknown [Picea sitchensis]
          Length = 197

 Score =  194 bits (494), Expect = 1e-47
 Identities = 96/154 (62%), Positives = 106/154 (68%), Gaps = 1/154 (0%)
 Frame = -3

Query: 459 IAGGYLRGRGIIVCSNHMTFQDEVNQVVIHELIHAYDDCRAKNLDWTXXXXXXXXXXXXX 280
           I+GGYLR  GI+VCSNHMTFQDEV+QV+IHELIHAYDDCRA NLDWT             
Sbjct: 70  ISGGYLREEGILVCSNHMTFQDEVDQVIIHELIHAYDDCRAANLDWT------------- 116

Query: 279 XXXXXXXXXXXXXXXXXXXXXXXNCAHHACSEIRAGHLSGDCHYKRELLRGIMKLRGQEQ 100
                                  NCAHHACSEIRAGHLSGDCHYKRELLRG + LRG EQ
Sbjct: 117 -----------------------NCAHHACSEIRAGHLSGDCHYKRELLRGFVSLRGHEQ 153

Query: 99  ECIKRRVMQSLKCNPNCG-AAAKDAMDAVWDICY 1
           EC+KRRV++S+  NP+C   AAK AMDAVWDICY
Sbjct: 154 ECVKRRVLKSVYANPHCSEEAAKQAMDAVWDICY 187


>ref|XP_004142774.1| PREDICTED: mitochondrial inner membrane protease ATP23-like
           [Cucumis sativus] gi|449483813|ref|XP_004156699.1|
           PREDICTED: mitochondrial inner membrane protease
           ATP23-like [Cucumis sativus]
          Length = 195

 Score =  194 bits (493), Expect = 2e-47
 Identities = 96/154 (62%), Positives = 105/154 (68%), Gaps = 1/154 (0%)
 Frame = -3

Query: 459 IAGGYLRGRGIIVCSNHMTFQDEVNQVVIHELIHAYDDCRAKNLDWTXXXXXXXXXXXXX 280
           I+GGY+RG GI+VCSNHM  QDEVNQVVIHELIHA+DDCRA NLDW              
Sbjct: 68  ISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWA------------- 114

Query: 279 XXXXXXXXXXXXXXXXXXXXXXXNCAHHACSEIRAGHLSGDCHYKRELLRGIMKLRGQEQ 100
                                  NC HHACSEIRAGHLSGDCHYKRELLRG MKLRG EQ
Sbjct: 115 -----------------------NCTHHACSEIRAGHLSGDCHYKRELLRGFMKLRGHEQ 151

Query: 99  ECIKRRVMQSLKCNPNC-GAAAKDAMDAVWDICY 1
           EC++RRVM+SL  NP C  AAAKDAM+AVWD+CY
Sbjct: 152 ECVRRRVMKSLVANPYCPEAAAKDAMEAVWDVCY 185


>ref|XP_002300068.1| predicted protein [Populus trichocarpa] gi|222847326|gb|EEE84873.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score =  194 bits (492), Expect = 2e-47
 Identities = 96/154 (62%), Positives = 106/154 (68%), Gaps = 1/154 (0%)
 Frame = -3

Query: 459 IAGGYLRGRGIIVCSNHMTFQDEVNQVVIHELIHAYDDCRAKNLDWTXXXXXXXXXXXXX 280
           IAGGY+RG GI+VCSNHM  QD+VNQVVIHELIHAYDDCRA NLDW              
Sbjct: 60  IAGGYVRGEGIMVCSNHMNTQDDVNQVVIHELIHAYDDCRAANLDWA------------- 106

Query: 279 XXXXXXXXXXXXXXXXXXXXXXXNCAHHACSEIRAGHLSGDCHYKRELLRGIMKLRGQEQ 100
                                  +CAHHACSEIRAGHLSGDCHYKRELLRG MKLRG EQ
Sbjct: 107 -----------------------DCAHHACSEIRAGHLSGDCHYKRELLRGYMKLRGHEQ 143

Query: 99  ECIKRRVMQSLKCNPNCG-AAAKDAMDAVWDICY 1
           +C+KRRVM+S+  NP C  AAAKDAM+AVWD+CY
Sbjct: 144 DCVKRRVMKSMIANPYCSKAAAKDAMEAVWDVCY 177


>ref|NP_566205.1| ku70-binding-like protein [Arabidopsis thaliana]
           gi|6017109|gb|AAF01592.1|AC009895_13 hypothetical
           protein [Arabidopsis thaliana]
           gi|13877935|gb|AAK44045.1|AF370230_1 unknown protein
           [Arabidopsis thaliana] gi|16323466|gb|AAL15227.1|
           unknown protein [Arabidopsis thaliana]
           gi|332640421|gb|AEE73942.1| ku70-binding-like protein
           [Arabidopsis thaliana]
          Length = 194

 Score =  194 bits (492), Expect = 2e-47
 Identities = 96/154 (62%), Positives = 107/154 (69%), Gaps = 1/154 (0%)
 Frame = -3

Query: 459 IAGGYLRGRGIIVCSNHMTFQDEVNQVVIHELIHAYDDCRAKNLDWTXXXXXXXXXXXXX 280
           +AGGY +GRGI VCSN++T QDEVNQVVIHELIHAYD+CRAKNLDWT             
Sbjct: 67  VAGGYTKGRGITVCSNYLTIQDEVNQVVIHELIHAYDECRAKNLDWT------------- 113

Query: 279 XXXXXXXXXXXXXXXXXXXXXXXNCAHHACSEIRAGHLSGDCHYKRELLRGIMKLRGQEQ 100
                                  NCAHHACSEIRAGHLSGDCH+KRELLRG +KLRG EQ
Sbjct: 114 -----------------------NCAHHACSEIRAGHLSGDCHFKRELLRGFIKLRGHEQ 150

Query: 99  ECIKRRVMQSLKCNPNCG-AAAKDAMDAVWDICY 1
           ECIKRRV++SL+ NP C   AAKDAM+AVWD CY
Sbjct: 151 ECIKRRVLKSLRGNPYCSEVAAKDAMEAVWDTCY 184


>ref|XP_002269112.1| PREDICTED: mitochondrial inner membrane protease ATP23 [Vitis
           vinifera] gi|296081332|emb|CBI17714.3| unnamed protein
           product [Vitis vinifera]
          Length = 195

 Score =  192 bits (487), Expect = 9e-47
 Identities = 92/154 (59%), Positives = 106/154 (68%), Gaps = 1/154 (0%)
 Frame = -3

Query: 459 IAGGYLRGRGIIVCSNHMTFQDEVNQVVIHELIHAYDDCRAKNLDWTXXXXXXXXXXXXX 280
           ++GGY RG GI+VCSNHM  QDEVNQVVIHELIHAYDDCRA NLDWT             
Sbjct: 68  VSGGYARGEGIVVCSNHMNIQDEVNQVVIHELIHAYDDCRAANLDWT------------- 114

Query: 279 XXXXXXXXXXXXXXXXXXXXXXXNCAHHACSEIRAGHLSGDCHYKRELLRGIMKLRGQEQ 100
                                  NCAHHACSEIR+GHLSGDCH+KRELLRG +K+RG  Q
Sbjct: 115 -----------------------NCAHHACSEIRSGHLSGDCHFKRELLRGYLKVRGHGQ 151

Query: 99  ECIKRRVMQSLKCNPNCG-AAAKDAMDAVWDICY 1
           EC++RRVM+S+  NP+C  AAAKDAM+AVWD+CY
Sbjct: 152 ECVRRRVMKSVTANPHCSEAAAKDAMEAVWDVCY 185


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