BLASTX nr result

ID: Coptis23_contig00005691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005691
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277561.1| PREDICTED: UPF0057 membrane protein At4g3065...    98   8e-19
ref|XP_003519155.1| PREDICTED: UPF0057 membrane protein At4g3066...    82   3e-14
ref|XP_002308410.1| stress-induced hydrophobic peptide [Populus ...    80   1e-13
gb|ABK93775.1| unknown [Populus trichocarpa]                           80   1e-13
gb|AFK40038.1| unknown [Medicago truncatula]                           80   2e-13

>ref|XP_002277561.1| PREDICTED: UPF0057 membrane protein At4g30650 [Vitis vinifera]
           gi|147791950|emb|CAN64139.1| hypothetical protein
           VITISV_004807 [Vitis vinifera]
           gi|147805308|emb|CAN73911.1| hypothetical protein
           VITISV_002031 [Vitis vinifera]
           gi|297743660|emb|CBI36543.3| unnamed protein product
           [Vitis vinifera]
          Length = 72

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 42/52 (80%), Positives = 48/52 (92%)
 Frame = +3

Query: 168 GVCFRHGCCSVEFLICLLLTILGYIPGIIYALYVIVAVNKEPEPDYWRPINA 323
           GVCFRHGCCSVEF ICLLLT+LGYIPGIIYALYVIV V+++P+  YWRP+NA
Sbjct: 21  GVCFRHGCCSVEFCICLLLTLLGYIPGIIYALYVIVFVDRDPDDYYWRPLNA 72


>ref|XP_003519155.1| PREDICTED: UPF0057 membrane protein At4g30660 [Glycine max]
           gi|255628505|gb|ACU14597.1| unknown [Glycine max]
          Length = 75

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/53 (73%), Positives = 45/53 (84%), Gaps = 1/53 (1%)
 Frame = +3

Query: 168 GVCFRHGCCSVEFLICLLLTILGYIPGIIYALYVIVAVNKEPEPD-YWRPINA 323
           GVCFRHGCCSVEF+ICLLLTILGYIPGIIYALY I+ V+++   D Y RP+ A
Sbjct: 21  GVCFRHGCCSVEFIICLLLTILGYIPGIIYALYAIIFVDRDQYFDEYRRPLYA 73


>ref|XP_002308410.1| stress-induced hydrophobic peptide [Populus trichocarpa]
           gi|222854386|gb|EEE91933.1| stress-induced hydrophobic
           peptide [Populus trichocarpa]
          Length = 73

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/53 (71%), Positives = 44/53 (83%), Gaps = 1/53 (1%)
 Frame = +3

Query: 168 GVCFRHGCCSVEFLICLLLTILGYIPGIIYALYVIVAVNK-EPEPDYWRPINA 323
           GVCFRHGCCSVEF ICLLLTILGY+PGIIYALY IV +++ E   +Y RP+ A
Sbjct: 21  GVCFRHGCCSVEFCICLLLTILGYVPGIIYALYAIVFIDRNEYFDEYRRPLYA 73


>gb|ABK93775.1| unknown [Populus trichocarpa]
          Length = 75

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/53 (71%), Positives = 44/53 (83%), Gaps = 1/53 (1%)
 Frame = +3

Query: 168 GVCFRHGCCSVEFLICLLLTILGYIPGIIYALYVIVAVNK-EPEPDYWRPINA 323
           GVCFRHGCCSVEF ICLLLTILGY+PGIIYALY IV +++ E   +Y RP+ A
Sbjct: 21  GVCFRHGCCSVEFCICLLLTILGYVPGIIYALYAIVFIDRNEYFDEYRRPLYA 73


>gb|AFK40038.1| unknown [Medicago truncatula]
          Length = 77

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/53 (67%), Positives = 45/53 (84%), Gaps = 1/53 (1%)
 Frame = +3

Query: 168 GVCFRHGCCSVEFLICLLLTILGYIPGIIYALYVIVAVNKEPEPD-YWRPINA 323
           GVCFRHGCC+VEF+ICLLLTILGY+PGIIYALY I+ ++++   D Y RP+ A
Sbjct: 21  GVCFRHGCCTVEFIICLLLTILGYLPGIIYALYAIIFIDRDQYFDEYRRPLYA 73


Top