BLASTX nr result

ID: Coptis23_contig00005684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005684
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264489.1| PREDICTED: uncharacterized protein LOC100248...   151   6e-35
gb|ABK94626.1| unknown [Populus trichocarpa]                          145   3e-33
gb|ABK96481.1| unknown [Populus trichocarpa x Populus deltoides]      144   7e-33
ref|XP_002319758.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-32
ref|NP_568353.1| uncharacterized protein [Arabidopsis thaliana] ...   142   4e-32

>ref|XP_002264489.1| PREDICTED: uncharacterized protein LOC100248442 [Vitis vinifera]
           gi|296088754|emb|CBI38204.3| unnamed protein product
           [Vitis vinifera]
          Length = 130

 Score =  151 bits (381), Expect = 6e-35
 Identities = 74/118 (62%), Positives = 83/118 (70%)
 Frame = +3

Query: 6   TKSPRPISDTEVREKKNNCYADIQSGLWGRECKYSKIATENCALNCLSPVCYTLVYESDP 185
           +KS RPISD+E+REKKN CYADI+SGLWG +CK S IA ENC L CLSP CY LVYESDP
Sbjct: 35  SKSRRPISDSEIREKKNECYADIESGLWGWQCKSSVIAKENCVLQCLSPPCYELVYESDP 94

Query: 186 XXXXXXXXXXXXXXXXXXXXXXXEEGERDHVRSQEYKYCMHRVSMGESLEGVKGSFDY 359
                                  EEGE+D  RSQEYKYCMHR+S+GESL+GVKGSFDY
Sbjct: 95  ----------------------LEEGEKDFTRSQEYKYCMHRLSLGESLDGVKGSFDY 130


>gb|ABK94626.1| unknown [Populus trichocarpa]
          Length = 129

 Score =  145 bits (367), Expect = 3e-33
 Identities = 69/117 (58%), Positives = 82/117 (70%)
 Frame = +3

Query: 6   TKSPRPISDTEVREKKNNCYADIQSGLWGRECKYSKIATENCALNCLSPVCYTLVYESDP 185
           +KSPRPI+D EVR+ KN CYADI+SGLWG++CK S  A ENCAL CLSP+CY L+YESDP
Sbjct: 34  SKSPRPITDVEVRQIKNECYADIESGLWGQQCKTSMTAKENCALKCLSPICYELIYESDP 93

Query: 186 XXXXXXXXXXXXXXXXXXXXXXXEEGERDHVRSQEYKYCMHRVSMGESLEGVKGSFD 356
                                  EEGE+D  RSQEYKYCM++ SMGESLEG+KG+FD
Sbjct: 94  ----------------------LEEGEKDFTRSQEYKYCMYKKSMGESLEGIKGAFD 128


>gb|ABK96481.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 129

 Score =  144 bits (363), Expect = 7e-33
 Identities = 68/117 (58%), Positives = 82/117 (70%)
 Frame = +3

Query: 6   TKSPRPISDTEVREKKNNCYADIQSGLWGRECKYSKIATENCALNCLSPVCYTLVYESDP 185
           +KSPRPI+D EVR+ KN CYADI+SGLWG++CK S  A ENCAL CLSP+CY L+YESDP
Sbjct: 34  SKSPRPITDVEVRQIKNECYADIESGLWGQQCKTSMTAKENCALKCLSPICYELIYESDP 93

Query: 186 XXXXXXXXXXXXXXXXXXXXXXXEEGERDHVRSQEYKYCMHRVSMGESLEGVKGSFD 356
                                  EEGE+D  RSQEYKYCM++ S+GESLEG+KG+FD
Sbjct: 94  ----------------------LEEGEKDFTRSQEYKYCMYKKSVGESLEGIKGAFD 128


>ref|XP_002319758.1| predicted protein [Populus trichocarpa] gi|222858134|gb|EEE95681.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/116 (58%), Positives = 81/116 (69%)
 Frame = +3

Query: 6   TKSPRPISDTEVREKKNNCYADIQSGLWGRECKYSKIATENCALNCLSPVCYTLVYESDP 185
           +KSPRPI+D EVR+ KN CYADI+SGLWG++CK S  A ENCAL CLSP+CY L+YESDP
Sbjct: 22  SKSPRPITDVEVRQIKNECYADIESGLWGQQCKTSMTAKENCALKCLSPICYELIYESDP 81

Query: 186 XXXXXXXXXXXXXXXXXXXXXXXEEGERDHVRSQEYKYCMHRVSMGESLEGVKGSF 353
                                  EEGE+D  RSQEYKYCM++ SMGESLEG+KG+F
Sbjct: 82  ----------------------LEEGEKDFTRSQEYKYCMYKKSMGESLEGIKGAF 115


>ref|NP_568353.1| uncharacterized protein [Arabidopsis thaliana]
           gi|51969204|dbj|BAD43294.1| unknown protein [Arabidopsis
           thaliana] gi|51971525|dbj|BAD44427.1| unknown protein
           [Arabidopsis thaliana] gi|98961059|gb|ABF59013.1|
           At5g17610 [Arabidopsis thaliana]
           gi|332005065|gb|AED92448.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 121

 Score =  142 bits (357), Expect = 4e-32
 Identities = 68/116 (58%), Positives = 81/116 (69%)
 Frame = +3

Query: 6   TKSPRPISDTEVREKKNNCYADIQSGLWGRECKYSKIATENCALNCLSPVCYTLVYESDP 185
           +KSPRPISD E+R+KK+ CY DI+SGLWG +CK S IA ENCAL CLSPVCY L+YESDP
Sbjct: 28  SKSPRPISDVEIRQKKSECYGDIESGLWGWQCKSSAIAKENCALRCLSPVCYQLIYESDP 87

Query: 186 XXXXXXXXXXXXXXXXXXXXXXXEEGERDHVRSQEYKYCMHRVSMGESLEGVKGSF 353
                                  EEGE+D +RSQEYKYCM++ S+GESLEGV+G F
Sbjct: 88  ----------------------LEEGEKDLIRSQEYKYCMYKSSLGESLEGVRGIF 121


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