BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005678
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173374.1| hypothetical protein NitaMp027 [Nicotiana tabac...   137   1e-33
ref|XP_003588355.1| Mitochondrial protein, putative [Medicago tr...   135   3e-30
ref|NP_085475.1| hypothetical protein ArthMp003 [Arabidopsis tha...   130   1e-28
emb|CBI20529.3| unnamed protein product [Vitis vinifera]              127   9e-28
gb|AFK45228.1| unknown [Medicago truncatula]                           92   6e-17

>ref|YP_173374.1| hypothetical protein NitaMp027 [Nicotiana tabacum]
           gi|57014030|ref|YP_173501.1| hypothetical protein
           NitaMp164 [Nicotiana tabacum]
           gi|56806536|dbj|BAD83437.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
           gi|56806666|dbj|BAD83567.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 138

 Score =  137 bits (346), Expect(2) = 1e-33
 Identities = 63/67 (94%), Positives = 65/67 (97%)
 Frame = +1

Query: 1   LATQMFQFAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMH 180
           LAT+MFQFAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMH
Sbjct: 43  LATKMFQFAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMH 102

Query: 181 SFRYSTV 201
           SFR  T+
Sbjct: 103 SFRSCTL 109



 Score = 30.4 bits (67), Expect(2) = 1e-33
 Identities = 11/16 (68%), Positives = 15/16 (93%)
 Frame = +2

Query: 197 RYTEHQPNLDDERKLQ 244
           RYTEHQPNLD++++ Q
Sbjct: 120 RYTEHQPNLDEKKEKQ 135


>ref|XP_003588355.1| Mitochondrial protein, putative [Medicago truncatula]
            gi|355477403|gb|AES58606.1| Mitochondrial protein,
            putative [Medicago truncatula]
          Length = 1106

 Score =  135 bits (340), Expect = 3e-30
 Identities = 62/66 (93%), Positives = 63/66 (95%)
 Frame = +1

Query: 1    LATQMFQFAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMH 180
            LAT+MFQFAKFEKSKERRLA ELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMH
Sbjct: 1022 LATKMFQFAKFEKSKERRLAAELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMH 1081

Query: 181  SFRYST 198
            SFR  T
Sbjct: 1082 SFRSCT 1087


>ref|NP_085475.1| hypothetical protein ArthMp003 [Arabidopsis thaliana]
           gi|41017293|sp|P93276.1|M030_ARATH RecName:
           Full=Uncharacterized mitochondrial protein AtMg00030;
           AltName: Full=ORF107a gi|1785675|emb|CAA69780.1| unnamed
           protein product [Arabidopsis thaliana]
          Length = 107

 Score =  130 bits (326), Expect = 1e-28
 Identities = 59/62 (95%), Positives = 59/62 (95%)
 Frame = +1

Query: 13  MFQFAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHSFRY 192
           MFQFAKF KSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHSFR 
Sbjct: 1   MFQFAKFSKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHSFRS 60

Query: 193 ST 198
            T
Sbjct: 61  CT 62


>emb|CBI20529.3| unnamed protein product [Vitis vinifera]
          Length = 80

 Score =  127 bits (319), Expect = 9e-28
 Identities = 58/63 (92%), Positives = 60/63 (95%)
 Frame = +1

Query: 13  MFQFAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPGIHPMHSFRY 192
           MFQFAKFEKSKERRLATELGYGF IGDPWITDGISPWPFAS+SVLPSQCPGIHPMHSFR 
Sbjct: 1   MFQFAKFEKSKERRLATELGYGFLIGDPWITDGISPWPFASQSVLPSQCPGIHPMHSFRS 60

Query: 193 STV 201
            T+
Sbjct: 61  CTL 63


>gb|AFK45228.1| unknown [Medicago truncatula]
          Length = 41

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 40/41 (97%), Positives = 40/41 (97%)
 Frame = -3

Query: 180 MHWMDARALRRKDAFRGERPWGDTVCDPWISDRETVSKLRG 58
           MHWMDARALRRKDAF GERPWGDTVCDPWISDRETVSKLRG
Sbjct: 1   MHWMDARALRRKDAFGGERPWGDTVCDPWISDRETVSKLRG 41