BLASTX nr result

ID: Coptis23_contig00005665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005665
         (956 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACR09748.1| DIV3B protein [Heptacodium miconioides]                203   4e-50
ref|XP_002280403.1| PREDICTED: uncharacterized protein LOC100244...   202   1e-49
ref|XP_002314123.1| predicted protein [Populus trichocarpa] gi|2...   199   8e-49
ref|XP_002525595.1| DNA binding protein, putative [Ricinus commu...   198   2e-48
ref|XP_002299827.1| predicted protein [Populus trichocarpa] gi|2...   194   3e-47

>gb|ACR09748.1| DIV3B protein [Heptacodium miconioides]
          Length = 318

 Score =  203 bits (517), Expect = 4e-50
 Identities = 103/151 (68%), Positives = 116/151 (76%), Gaps = 6/151 (3%)
 Frame = +2

Query: 521 NFGMMKWGMEISSPYS-----NWLLGGTKITKWTQQENKLFENALAIYDKETPDRWQKVA 685
           + G    GMEI SP S     NWL    K TKWT +ENK FENALA++DK+TPDRW  VA
Sbjct: 3   SLGTTNRGMEILSPASYLRNSNWLFEEAKETKWTSEENKRFENALALFDKDTPDRWYNVA 62

Query: 686 DMIPGKSVNDVFNQYKELENDVSDIEAGLIPIPGYTTS-SFSFEWMNENGDFDGLKQSYG 862
            MIPGK+V DV  QY+ELE DVSDIEAGLIPIPGYTTS SF+ EWMN N +F GLKQ YG
Sbjct: 63  AMIPGKTVRDVIKQYRELEEDVSDIEAGLIPIPGYTTSDSFTLEWMN-NQEFHGLKQFYG 121

Query: 863 AGVKRTSSTRPSDHERKKGVPWTEKEHKLFL 955
            G+KR+SSTRPSD ERKKGVPWTE+EH+ FL
Sbjct: 122 PGLKRSSSTRPSDQERKKGVPWTEEEHRXFL 152


>ref|XP_002280403.1| PREDICTED: uncharacterized protein LOC100244960 [Vitis vinifera]
           gi|147844863|emb|CAN81229.1| hypothetical protein
           VITISV_033664 [Vitis vinifera]
          Length = 307

 Score =  202 bits (513), Expect = 1e-49
 Identities = 99/146 (67%), Positives = 115/146 (78%), Gaps = 5/146 (3%)
 Frame = +2

Query: 533 MKWGMEISSPYS-----NWLLGGTKITKWTQQENKLFENALAIYDKETPDRWQKVADMIP 697
           MKW MEI SP S     N LL  +K ++WT +ENK FENALA+YD++TPDRWQKVA MIP
Sbjct: 1   MKWEMEILSPASYLSNSNCLLEESKSSRWTPEENKTFENALAVYDRDTPDRWQKVAAMIP 60

Query: 698 GKSVNDVFNQYKELENDVSDIEAGLIPIPGYTTSSFSFEWMNENGDFDGLKQSYGAGVKR 877
           GK+V DVF QYKELE DV  IEAGL+PIPGY+TS F+ EW   +G ++GLKQ YG G KR
Sbjct: 61  GKTVGDVFKQYKELELDVGKIEAGLVPIPGYSTSPFTLEWTTNHG-YEGLKQPYGLGGKR 119

Query: 878 TSSTRPSDHERKKGVPWTEKEHKLFL 955
            SSTRP+D ERKKGVPWTE+EHKLFL
Sbjct: 120 PSSTRPTDQERKKGVPWTEEEHKLFL 145


>ref|XP_002314123.1| predicted protein [Populus trichocarpa] gi|222850531|gb|EEE88078.1|
           predicted protein [Populus trichocarpa]
          Length = 308

 Score =  199 bits (506), Expect = 8e-49
 Identities = 100/147 (68%), Positives = 113/147 (76%), Gaps = 6/147 (4%)
 Frame = +2

Query: 533 MKWGMEISSP-----YSNWLLGGTKITKWTQQENKLFENALAIYDKETPDRWQKVADMIP 697
           MKW  EI SP      SNWL   +K TKWT  ENK FENALAIYDKET DRW KVA MIP
Sbjct: 1   MKWETEILSPGSYLSSSNWLAEESKNTKWTIAENKAFENALAIYDKETSDRWHKVAAMIP 60

Query: 698 GKSVNDVFNQYKELENDVSDIEAGLIPIPGYTTSSFSFEWMNENG-DFDGLKQSYGAGVK 874
           GK+V DV  QYKELE DVS IEAGLIP+PGY++S F+ +W+N NG  +DG KQSYG G K
Sbjct: 61  GKTVEDVIKQYKELELDVSYIEAGLIPVPGYSSSPFTLDWVNGNGYGYDGFKQSYGLGGK 120

Query: 875 RTSSTRPSDHERKKGVPWTEKEHKLFL 955
           R+S+ RP+D ERKKGVPWTE+EHKLFL
Sbjct: 121 RSSTGRPTDQERKKGVPWTEEEHKLFL 147


>ref|XP_002525595.1| DNA binding protein, putative [Ricinus communis]
           gi|223535031|gb|EEF36713.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 307

 Score =  198 bits (503), Expect = 2e-48
 Identities = 94/146 (64%), Positives = 114/146 (78%), Gaps = 5/146 (3%)
 Frame = +2

Query: 533 MKWGMEISSPYS-----NWLLGGTKITKWTQQENKLFENALAIYDKETPDRWQKVADMIP 697
           MKW + + SP S     NWL+  +K TKWT  ENK+FENALA+YDK+TPDRW KVA MIP
Sbjct: 1   MKWDIGVLSPTSYLSSTNWLIEESKNTKWTPAENKMFENALAVYDKDTPDRWHKVAAMIP 60

Query: 698 GKSVNDVFNQYKELENDVSDIEAGLIPIPGYTTSSFSFEWMNENGDFDGLKQSYGAGVKR 877
           GK+V DV  QY+ELE DV++IEAGL+PIPGY TS+F+ +W+N N  +DG K SY  G KR
Sbjct: 61  GKTVGDVIKQYRELEVDVNNIEAGLVPIPGYNTSAFTLDWVNSN-SYDGFKPSYAFGGKR 119

Query: 878 TSSTRPSDHERKKGVPWTEKEHKLFL 955
           +SS RP+D ERKKGVPWTE+EHKLFL
Sbjct: 120 SSSGRPADQERKKGVPWTEEEHKLFL 145


>ref|XP_002299827.1| predicted protein [Populus trichocarpa] gi|222847085|gb|EEE84632.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  194 bits (493), Expect = 3e-47
 Identities = 96/142 (67%), Positives = 112/142 (78%), Gaps = 5/142 (3%)
 Frame = +2

Query: 545 MEISSPYS-----NWLLGGTKITKWTQQENKLFENALAIYDKETPDRWQKVADMIPGKSV 709
           M I SP S     NWLL  +K TKWT  ENK FENALA+YD++TPDRW KVA MIPGK+V
Sbjct: 1   MGILSPASYLSSTNWLLEESKNTKWTPAENKAFENALAVYDEDTPDRWHKVAAMIPGKTV 60

Query: 710 NDVFNQYKELENDVSDIEAGLIPIPGYTTSSFSFEWMNENGDFDGLKQSYGAGVKRTSST 889
            DV  QYKELE DVS IEAGLIP+PGY+TS F+ +W++ NG +DG KQSYG G KR+S+ 
Sbjct: 61  GDVIKQYKELELDVSYIEAGLIPVPGYSTSPFTLDWVDGNG-YDGFKQSYGLGGKRSSTG 119

Query: 890 RPSDHERKKGVPWTEKEHKLFL 955
           RP+D ERKKGVPWTE+EHKLFL
Sbjct: 120 RPADQERKKGVPWTEEEHKLFL 141


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