BLASTX nr result
ID: Coptis23_contig00005664
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00005664
(1649 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269751.1| PREDICTED: probable phenylalanyl-tRNA synthe... 587 e-165
ref|XP_002523199.1| phenylalanyl-tRNA synthetase beta chain, put... 569 e-160
ref|XP_002330528.1| predicted protein [Populus trichocarpa] gi|2... 569 e-160
ref|XP_002319202.1| predicted protein [Populus trichocarpa] gi|2... 562 e-157
ref|NP_177399.1| phenylalanyl-tRNA synthetase beta chain [Arabid... 534 e-149
>ref|XP_002269751.1| PREDICTED: probable phenylalanyl-tRNA synthetase beta chain [Vitis
vinifera] gi|297734128|emb|CBI15375.3| unnamed protein
product [Vitis vinifera]
Length = 592
Score = 587 bits (1512), Expect = e-165
Identities = 297/411 (72%), Positives = 339/411 (82%)
Frame = -1
Query: 1649 NFVPLKQANSFRADELMKFYESDVKLKKFLHIIENSPVFPVIYDHNRTVLSMPPIINGAH 1470
NFVPLKQ FRADELM+FY+SD+KLKKFLHIIENSPVFPVIYDHNRTVLS+PPIINGAH
Sbjct: 183 NFVPLKQVKKFRADELMEFYKSDLKLKKFLHIIENSPVFPVIYDHNRTVLSLPPIINGAH 242
Query: 1469 SAISLETKNVFIECTATDLTKAKIVLNTMVTMFSVYCERKFEVESVEVISSDGNSSVYPD 1290
SAI+L+TKNVFIECTATDLTKAKIVLNTMVTMFS+YCERKFEVE VEVI DG S +YPD
Sbjct: 243 SAINLKTKNVFIECTATDLTKAKIVLNTMVTMFSMYCERKFEVEPVEVIYPDGKSCLYPD 302
Query: 1289 LSASTMEVPLSKITGRIGVSADANQVISLLNKMQLQAKQSMSSTEECSINVSVPPTRSDI 1110
LS +MEVPLS I +GVS +A++V SLLN+MQL AKQS+S +EC I VSVPPTRSD+
Sbjct: 303 LSVYSMEVPLSYIIDTVGVSLEADEVTSLLNRMQLHAKQSLSEDKECKIIVSVPPTRSDV 362
Query: 1109 LAACDVAEDFAIAYGFNDIPRTTRLVSGKQQTLSQISDSIRLEVAHAGFTEVLTWILCSY 930
L CDV ED IAYG+N++PR +L S K L+Q+SD IRLE+A GFTE+LTWILCSY
Sbjct: 363 LHPCDVVEDVGIAYGYNNVPR-RKLASLKPLPLNQLSDLIRLEIAMNGFTEILTWILCSY 421
Query: 929 KEIFPMLNRKDDKSTAVLIGNPRSADFEVTRTTLMPGLLKTVRENNYHPKPIKIFEVGDV 750
KE F MLNRKDDKSTAV+IGNPRSADFEV RT+LMPG LKTV N HPKPIKIFEVGD+
Sbjct: 422 KENFSMLNRKDDKSTAVIIGNPRSADFEVVRTSLMPGALKTVAHNKDHPKPIKIFEVGDI 481
Query: 749 VLLDDMKDVGATNRRHLAALYCDDKSGFEEIHTLVLRIMEIMDKPCVPIGDSTGYYITET 570
+LD+ KDVGATNRR LAALYC SGFE IH LV RIMEI+ P V +GD TGYYI +
Sbjct: 482 AVLDEAKDVGATNRRQLAALYCGANSGFELIHCLVDRIMEIIGCPFVAVGDDTGYYIKLS 541
Query: 569 NREDDPEFLQGRKGSITLNGKCVGRFGIVHPEVLSNFDIDFPCSYMELDIE 417
N +PEFL GR+ SI GK +G FGIVHPE+L+NFDI PCS++EL++E
Sbjct: 542 N---EPEFLPGRQASIIYRGKHIGTFGIVHPEILNNFDISDPCSFLELNME 589
>ref|XP_002523199.1| phenylalanyl-tRNA synthetase beta chain, putative [Ricinus communis]
gi|223537606|gb|EEF39230.1| phenylalanyl-tRNA synthetase
beta chain, putative [Ricinus communis]
Length = 593
Score = 569 bits (1467), Expect = e-160
Identities = 287/414 (69%), Positives = 337/414 (81%)
Frame = -1
Query: 1649 NFVPLKQANSFRADELMKFYESDVKLKKFLHIIENSPVFPVIYDHNRTVLSMPPIINGAH 1470
NFVPLKQ ++RAD+LM+FY +D+KLKKFLHIIENSPVFP++YD RTVLS+PPIINGAH
Sbjct: 184 NFVPLKQVKNYRADQLMEFYRNDLKLKKFLHIIENSPVFPILYDSRRTVLSLPPIINGAH 243
Query: 1469 SAISLETKNVFIECTATDLTKAKIVLNTMVTMFSVYCERKFEVESVEVISSDGNSSVYPD 1290
SAI+L+TKNVFIECTATDLTKAKIVLNTMVT+FS YC++KFEVE VEVI DG S+VYPD
Sbjct: 244 SAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSAYCKKKFEVEPVEVIYPDGKSNVYPD 303
Query: 1289 LSASTMEVPLSKITGRIGVSADANQVISLLNKMQLQAKQSMSSTEECSINVSVPPTRSDI 1110
LS MEVPLS ITG IGVS ++ SLLN+MQL A+QS+S+ ++C+INVS+PPTRSD+
Sbjct: 304 LSVYNMEVPLSYITGSIGVSLKTEEITSLLNRMQLHAEQSVSNADQCTINVSIPPTRSDV 363
Query: 1109 LAACDVAEDFAIAYGFNDIPRTTRLVSGKQQTLSQISDSIRLEVAHAGFTEVLTWILCSY 930
L CDV ED AIAYG+N+IP+ +L S K L+Q+ D IR+EVA GFTEVLTWILCSY
Sbjct: 364 LHPCDVMEDVAIAYGYNNIPK-RKLPSLKPLALNQLEDLIRVEVAMNGFTEVLTWILCSY 422
Query: 929 KEIFPMLNRKDDKSTAVLIGNPRSADFEVTRTTLMPGLLKTVRENNYHPKPIKIFEVGDV 750
+E F MLNRKDD STAV++GNPRS+DFEV RT+LMPG LK V N HPKPIKIFEVGD+
Sbjct: 423 RENFGMLNRKDDGSTAVIVGNPRSSDFEVVRTSLMPGALKIVGHNKDHPKPIKIFEVGDI 482
Query: 749 VLLDDMKDVGATNRRHLAALYCDDKSGFEEIHTLVLRIMEIMDKPCVPIGDSTGYYITET 570
LDD KDVGA NRR LAALYC SGFE IH+LV R+ME+M P VPIG++TGYYI
Sbjct: 483 AKLDDSKDVGAANRRLLAALYCGTNSGFELIHSLVDRVMEVMGTPFVPIGNNTGYYIQCC 542
Query: 569 NREDDPEFLQGRKGSITLNGKCVGRFGIVHPEVLSNFDIDFPCSYMELDIEYLI 408
D PEFL GR+ SI GK +G FGIVHPEVL+NFDI PCS++ELDIE L+
Sbjct: 543 ---DAPEFLPGRQASIIYKGKHIGIFGIVHPEVLNNFDIPDPCSFLELDIECLL 593
>ref|XP_002330528.1| predicted protein [Populus trichocarpa] gi|222872462|gb|EEF09593.1|
predicted protein [Populus trichocarpa]
Length = 595
Score = 569 bits (1466), Expect = e-160
Identities = 287/414 (69%), Positives = 335/414 (80%)
Frame = -1
Query: 1649 NFVPLKQANSFRADELMKFYESDVKLKKFLHIIENSPVFPVIYDHNRTVLSMPPIINGAH 1470
NFVPLKQ +FRADELM+FY+SD+KLKKFLHIIENSPV+P+IYD RTVLS+PPIINGAH
Sbjct: 186 NFVPLKQEKNFRADELMEFYKSDMKLKKFLHIIENSPVYPIIYDSKRTVLSLPPIINGAH 245
Query: 1469 SAISLETKNVFIECTATDLTKAKIVLNTMVTMFSVYCERKFEVESVEVISSDGNSSVYPD 1290
SAI+L+TKNVFIECTATDLTKA IVLNTMVT FS YC+RKFEVE V+VI SDG S VYPD
Sbjct: 246 SAITLKTKNVFIECTATDLTKASIVLNTMVTTFSAYCQRKFEVEPVKVIYSDGKSYVYPD 305
Query: 1289 LSASTMEVPLSKITGRIGVSADANQVISLLNKMQLQAKQSMSSTEECSINVSVPPTRSDI 1110
LS MEVPLS ITG IGVS A +V SLLN+MQL+A+ S+ +C+INV +PPTRSD+
Sbjct: 306 LSVYNMEVPLSYITGSIGVSLAAEKVTSLLNRMQLRAEHSVFDDNKCNINVLIPPTRSDV 365
Query: 1109 LAACDVAEDFAIAYGFNDIPRTTRLVSGKQQTLSQISDSIRLEVAHAGFTEVLTWILCSY 930
L CDV ED AIAYG+NDIP+ RL S K L+Q+ D IR E+A GFTEVLTWILCSY
Sbjct: 366 LHPCDVMEDVAIAYGYNDIPK-RRLPSMKPLPLNQLEDLIRAEIAMNGFTEVLTWILCSY 424
Query: 929 KEIFPMLNRKDDKSTAVLIGNPRSADFEVTRTTLMPGLLKTVRENNYHPKPIKIFEVGDV 750
+E F LNR+DD+S+AV+IGNPRS+DFEV RT+LMPG LK + N HPKPIKIFEVGD+
Sbjct: 425 RENFASLNREDDQSSAVIIGNPRSSDFEVVRTSLMPGALKIIGHNKDHPKPIKIFEVGDI 484
Query: 749 VLLDDMKDVGATNRRHLAALYCDDKSGFEEIHTLVLRIMEIMDKPCVPIGDSTGYYITET 570
LLD+ KDVGATNRRHLAALYC SGFE IH+LV RIME+M P VPIGD+TGYYI
Sbjct: 485 ALLDESKDVGATNRRHLAALYCGTNSGFELIHSLVDRIMEVMGTPFVPIGDNTGYYI--- 541
Query: 569 NREDDPEFLQGRKGSITLNGKCVGRFGIVHPEVLSNFDIDFPCSYMELDIEYLI 408
R ++PEFL GR+ SI GK G FGIVHP+VL+NF I PCS++E+DIE+ +
Sbjct: 542 ERSNEPEFLPGRQASIIYKGKHFGNFGIVHPQVLNNFVITDPCSFLEIDIEHFL 595
>ref|XP_002319202.1| predicted protein [Populus trichocarpa] gi|222857578|gb|EEE95125.1|
predicted protein [Populus trichocarpa]
Length = 598
Score = 562 bits (1448), Expect = e-157
Identities = 289/416 (69%), Positives = 335/416 (80%), Gaps = 2/416 (0%)
Frame = -1
Query: 1649 NFVPLKQANSFRADELMKFYESDVKLKKFLHIIENSPVFPVIYDHNRTVLSMPPIINGAH 1470
NFVPLKQ SFRADELM+FY+SD+KLKKFL IIENSPVFPVI+D RTVLS+PPIINGAH
Sbjct: 187 NFVPLKQEKSFRADELMEFYKSDMKLKKFLQIIENSPVFPVIHDSKRTVLSLPPIINGAH 246
Query: 1469 SAISLETKNVFIECTATDLTKAKIVLNTMVTMFSVYCERKFEVESVEVISSDGNSSVYPD 1290
SAI+L+TKNVFIECTATDLTKA IVLNTMVT+FS YC+RKFEVE VEVI SDG S +YPD
Sbjct: 247 SAITLKTKNVFIECTATDLTKANIVLNTMVTIFSAYCQRKFEVEPVEVIYSDGRSFIYPD 306
Query: 1289 LSASTMEVPLSKITGRIGVSADANQVISLLNKMQLQAKQSMSSTEECSINVSVPPTRSDI 1110
LS MEVPLS ITG IGVS +A +V SLLN+MQL+A+ S+ +C+INVSVPPTRSDI
Sbjct: 307 LSVYNMEVPLSYITGSIGVSLEAEKVTSLLNRMQLRAEHSVLDDNKCNINVSVPPTRSDI 366
Query: 1109 LAACDVAEDFAIAYGFNDIPRTTRLVSGKQQTLSQISDSIRLEVAHAGFTEVLTWILCSY 930
L CDV ED AIAYG+NDIP+ RL S K L+Q+ D IR E+A GFTEVLTWILCS
Sbjct: 367 LHPCDVMEDVAIAYGYNDIPK-RRLPSMKPLPLNQLEDLIRAEIAMNGFTEVLTWILCSN 425
Query: 929 KEIFPMLNRKDDKSTAVLIGNPRSADFEV--TRTTLMPGLLKTVRENNYHPKPIKIFEVG 756
+E F +LNR+DD+S+AV+IGNPRS+DFEV RT+LMPG LK + N HPKPIKIFEVG
Sbjct: 426 RENFALLNREDDQSSAVIIGNPRSSDFEVCAVRTSLMPGALKIIGHNKDHPKPIKIFEVG 485
Query: 755 DVVLLDDMKDVGATNRRHLAALYCDDKSGFEEIHTLVLRIMEIMDKPCVPIGDSTGYYIT 576
DV LD+ KDVGATNRRHLAALYC SGFE IH+L+ RIME++ P VPIGD+TGYYI
Sbjct: 486 DVAFLDESKDVGATNRRHLAALYCGTNSGFELIHSLLDRIMEVLGTPFVPIGDNTGYYI- 544
Query: 575 ETNREDDPEFLQGRKGSITLNGKCVGRFGIVHPEVLSNFDIDFPCSYMELDIEYLI 408
R D PEFL GR+ SI GK +G FGIVHP+VL+NF I PCS +E+DIE+ +
Sbjct: 545 --QRSDAPEFLPGRQASIIYKGKHIGDFGIVHPQVLNNFIITDPCSLLEIDIEHFL 598
>ref|NP_177399.1| phenylalanyl-tRNA synthetase beta chain [Arabidopsis thaliana]
gi|12644590|sp|Q9SGE9.1|SYFB_ARATH RecName: Full=Probable
phenylalanine--tRNA ligase beta subunit; AltName:
Full=Phenylalanyl-tRNA synthetase beta subunit;
Short=PheRS gi|12323785|gb|AAG51865.1|AC010926_28
putative phenylalanyl-tRNA synthetase beta-subunit;
PheHB; 86609-90570 [Arabidopsis thaliana]
gi|17065262|gb|AAL32785.1| putative phenylalanyl-tRNA
synthetase beta-subunit; PheHB [Arabidopsis thaliana]
gi|22136234|gb|AAM91195.1| putative phenylalanyl-tRNA
synthetase beta-subunit; PheHB [Arabidopsis thaliana]
gi|332197217|gb|AEE35338.1| phenylalanyl-tRNA synthetase
beta chain [Arabidopsis thaliana]
Length = 598
Score = 534 bits (1376), Expect = e-149
Identities = 275/421 (65%), Positives = 328/421 (77%), Gaps = 7/421 (1%)
Frame = -1
Query: 1649 NFVPLKQANSFRADELMKFYESDVKLKKFLHIIENSPVFPVIYDHNRTVLSMPPIINGAH 1470
NFVPLKQ SFRADEL++FY+SD+KLKKFLHIIENSPVFPV+YD RTVLS+PPIINGAH
Sbjct: 183 NFVPLKQTKSFRADELIEFYKSDMKLKKFLHIIENSPVFPVLYDSKRTVLSLPPIINGAH 242
Query: 1469 SAISLETKNVFIECTATDLTKAKIVLNTMVTMFSVYCERKFEVESVEVISSDGNSSVYPD 1290
SAI+L+TKNVFIECTATDLTKAKIVLNTMVT FS +C RKFE+E VEV DG S +YPD
Sbjct: 243 SAITLQTKNVFIECTATDLTKAKIVLNTMVTTFSEFCARKFEIEPVEVTYDDGKSYIYPD 302
Query: 1289 LSASTMEVPLSKITGRIGVSADANQVISLLNKMQLQAKQSMSSTEECSINVSVPPTRSDI 1110
L+ MEVPLS IT IGVS QV SLL +MQLQA+Q+ SS +C+I V VPP+RSD+
Sbjct: 303 LAVYDMEVPLSFITDSIGVSLKVEQVTSLLTRMQLQAEQAKSSDNQCAIKVHVPPSRSDV 362
Query: 1109 LAACDVAEDFAIAYGFNDIPRTTRLVSGKQQTLSQISDSIRLEVAHAGFTEVLTWILCSY 930
L CDV ED AIAYGFN+IP T + S K TL++++D +R+E+A +TEV+TW+LCS+
Sbjct: 363 LHPCDVMEDVAIAYGFNNIP-TRKPASIKPLTLNELTDLLRIEIAMCVYTEVVTWLLCSH 421
Query: 929 KEIFPMLNRKDDKSTAVLIGNPRSADFEVTRTTLMPGLLKTVRENNYHPKPIKIFEVGDV 750
KE F MLNR +D ++AV++GNPRSADFE R LMPGLLKTV NN +PKPIKIFE+ DV
Sbjct: 422 KENFAMLNR-EDVNSAVIVGNPRSADFEAMRRALMPGLLKTVGHNNKYPKPIKIFEISDV 480
Query: 749 VLLDDMKDVGATNRRHLAALYCDDKSGFEEIHTLVLRIMEIMDKPC-------VPIGDST 591
V+LD+ KDVGA+NRRHLAALYC SGFE IH LV RIME+M P VPI +
Sbjct: 481 VMLDESKDVGASNRRHLAALYCGATSGFELIHGLVDRIMEVMAIPFLTIHENNVPINEKD 540
Query: 590 GYYITETNREDDPEFLQGRKGSITLNGKCVGRFGIVHPEVLSNFDIDFPCSYMELDIEYL 411
GYY+ +PEFL GR+ SI + GK +G FGIVHPEVL+NFDI PCSY+ELDIE +
Sbjct: 541 GYYV---KLSQEPEFLPGRQASIIVRGKHIGNFGIVHPEVLNNFDIPDPCSYLELDIEAI 597
Query: 410 I 408
+
Sbjct: 598 L 598