BLASTX nr result

ID: Coptis23_contig00005655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005655
         (3460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275474.1| PREDICTED: LETM1 and EF-hand domain-containi...   290   2e-75
ref|XP_002309727.1| predicted protein [Populus trichocarpa] gi|2...   289   4e-75
ref|XP_003635110.1| PREDICTED: LETM1 and EF-hand domain-containi...   283   2e-73
emb|CBI23351.3| unnamed protein product [Vitis vinifera]              283   2e-73
ref|XP_002312206.1| predicted protein [Populus trichocarpa] gi|2...   283   3e-73

>ref|XP_002275474.1| PREDICTED: LETM1 and EF-hand domain-containing protein 1,
            mitochondrial [Vitis vinifera]
            gi|296084337|emb|CBI24725.3| unnamed protein product
            [Vitis vinifera]
          Length = 764

 Score =  290 bits (741), Expect = 2e-75
 Identities = 162/278 (58%), Positives = 191/278 (68%)
 Frame = -2

Query: 2898 RAFTVSGKLRPEEAVMNTMSSLPDEVVDTVQVTSLPSEDSVSERRRKLXXXXXXXXXXXX 2719
            RAFTVSGK+RPEEAV  T+SSLPDEVVDTV +T+LPSEDSVSERRRKL            
Sbjct: 483  RAFTVSGKVRPEEAVQATLSSLPDEVVDTVGITALPSEDSVSERRRKLEYLEMQEELIKE 542

Query: 2718 XXXXXXXEKARLKGSDISQEDVALKEMESSTARDAQEQAPSEMLDKRDQLCXXXXXXXXX 2539
                   E+A++K + +SQED+ALKEM   TAR+AQEQA +  ++K++QLC         
Sbjct: 543  EEEKEEEEQAKIKETVVSQEDLALKEMTIPTAREAQEQARARAVEKQEQLCELSRALAVL 602

Query: 2538 XXXXXXXXXXXEFMRLVNKEIKLYNSMVXXXXXXXXXXXXXAYRXXXXXXXXXXXXXXXX 2359
                       EF+RLVNKEI+LYNSMV             AYR                
Sbjct: 603  ASASSVSREREEFLRLVNKEIELYNSMVEKEGTDGEKEAMEAYRAARDESDHAAKVAVGD 662

Query: 2358 KISSALIDRVDAMLQKLEKEIDDVDAEIGDRWRLLDRDYDGKVTPEEVAVAAAYLKDTLN 2179
            ++SSALIDRVDAMLQ LEKEIDDVDA+IGDRWRLLDRDYDGKVTPEEVA AA YLKDTL 
Sbjct: 663  EVSSALIDRVDAMLQNLEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEVAAAALYLKDTLG 722

Query: 2178 KEGVQELISSLSKDRDGKILVEDIVKLGTQKEDVNAAD 2065
            KEG+QELIS+LSKD+DGKI VEDIV+LG++ ED N ++
Sbjct: 723  KEGIQELISNLSKDKDGKIHVEDIVRLGSRNEDANTSE 760



 Score =  234 bits (597), Expect = 1e-58
 Identities = 115/134 (85%), Positives = 128/134 (95%)
 Frame = -3

Query: 3458 LTARIEYAKFLQDTVKEMAKEVQNSRSGEIKKTAEDLDDFLSKVRKGARVSNEEILGFAK 3279
            L ARIEYA+FLQDTVKEMAKEVQNSRSGEIKKTAEDLD+FL++VR+GA VSN+EIL FAK
Sbjct: 316  LNARIEYARFLQDTVKEMAKEVQNSRSGEIKKTAEDLDEFLNRVRRGAGVSNDEILAFAK 375

Query: 3278 LFNDELTLDNINRPRLVNMCKYMGISPYGTDAYLRYALRKRLQWIKNDDKLIQAEGVDSL 3099
            LFNDELTLDNI+RPRLVNMCKYMGISP+GTDAYLRY LRKRLQWIKNDD+LIQAEGV+SL
Sbjct: 376  LFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRKRLQWIKNDDRLIQAEGVESL 435

Query: 3098 SESELRQTVRERGI 3057
            SE+ELR+  RERG+
Sbjct: 436  SEAELREDCRERGM 449


>ref|XP_002309727.1| predicted protein [Populus trichocarpa] gi|222852630|gb|EEE90177.1|
            predicted protein [Populus trichocarpa]
          Length = 750

 Score =  289 bits (739), Expect = 4e-75
 Identities = 164/281 (58%), Positives = 188/281 (66%)
 Frame = -2

Query: 2898 RAFTVSGKLRPEEAVMNTMSSLPDEVVDTVQVTSLPSEDSVSERRRKLXXXXXXXXXXXX 2719
            RAFTVSGKL+PEEAV  T+SSLPDEVVDTV VT+LPSEDSVSERRRKL            
Sbjct: 469  RAFTVSGKLKPEEAVRATLSSLPDEVVDTVGVTALPSEDSVSERRRKLEYLEMQEEMIKE 528

Query: 2718 XXXXXXXEKARLKGSDISQEDVALKEMESSTARDAQEQAPSEMLDKRDQLCXXXXXXXXX 2539
                   E+AR+K S +S+EDVALKEM  STAR+AQE A +  L+K++ LC         
Sbjct: 529  EEEDEEEERARMKESKVSEEDVALKEMTLSTAREAQEMARASTLEKQEHLCELSRALAVL 588

Query: 2538 XXXXXXXXXXXEFMRLVNKEIKLYNSMVXXXXXXXXXXXXXAYRXXXXXXXXXXXXXXXX 2359
                       EF+ LVNKEI+LYNSMV             AYR                
Sbjct: 589  ASASSVSREREEFLGLVNKEIELYNSMVEKEGNDGEKEAVKAYRAAREETDRASEADERD 648

Query: 2358 KISSALIDRVDAMLQKLEKEIDDVDAEIGDRWRLLDRDYDGKVTPEEVAVAAAYLKDTLN 2179
            ++SSALI+RVD MLQ LEKEIDDVDA+IGD WR+LDRDYDGKVTPEEVA AA YLKDTL 
Sbjct: 649  EVSSALIERVDGMLQNLEKEIDDVDAKIGDHWRILDRDYDGKVTPEEVAAAAMYLKDTLG 708

Query: 2178 KEGVQELISSLSKDRDGKILVEDIVKLGTQKEDVNAADEEQ 2056
            KEG+QELIS+LSKDRDGKILVEDIVKLG+  ED  A +E +
Sbjct: 709  KEGIQELISNLSKDRDGKILVEDIVKLGSWTEDAKATEERE 749



 Score =  231 bits (590), Expect = 8e-58
 Identities = 116/134 (86%), Positives = 127/134 (94%)
 Frame = -3

Query: 3458 LTARIEYAKFLQDTVKEMAKEVQNSRSGEIKKTAEDLDDFLSKVRKGARVSNEEILGFAK 3279
            L ARIEYAKFLQDTVKEMAKEVQNSRSGEIKKTAEDLDDFL+ VR+G+ VSN+EILGFAK
Sbjct: 302  LNARIEYAKFLQDTVKEMAKEVQNSRSGEIKKTAEDLDDFLNNVRRGSIVSNDEILGFAK 361

Query: 3278 LFNDELTLDNINRPRLVNMCKYMGISPYGTDAYLRYALRKRLQWIKNDDKLIQAEGVDSL 3099
            LFNDELTLDNI+RPRLVNMCKYMGISP+GTDAYLRY LRKRLQ IKNDD+LIQAEGV+SL
Sbjct: 362  LFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRKRLQRIKNDDRLIQAEGVESL 421

Query: 3098 SESELRQTVRERGI 3057
            SE+ELR+  RERG+
Sbjct: 422  SEAELREDCRERGM 435


>ref|XP_003635110.1| PREDICTED: LETM1 and EF-hand domain-containing protein 1,
            mitochondrial-like [Vitis vinifera]
          Length = 504

 Score =  283 bits (724), Expect = 2e-73
 Identities = 158/276 (57%), Positives = 187/276 (67%)
 Frame = -2

Query: 2898 RAFTVSGKLRPEEAVMNTMSSLPDEVVDTVQVTSLPSEDSVSERRRKLXXXXXXXXXXXX 2719
            RAFTVSGK++PEEAV  T+SSLPDEVVDTV VT+LPSEDSVSERRRKL            
Sbjct: 223  RAFTVSGKVKPEEAVQATLSSLPDEVVDTVGVTTLPSEDSVSERRRKLEFLEMQEELIKE 282

Query: 2718 XXXXXXXEKARLKGSDISQEDVALKEMESSTARDAQEQAPSEMLDKRDQLCXXXXXXXXX 2539
                    +AR+K S ++Q+DVAL+EM   TAR+AQEQA ++ L+K+ Q+C         
Sbjct: 283  EEEKEEEVQARIKESTVNQKDVALEEMTIPTAREAQEQAEAKTLEKQQQICELSRALVVL 342

Query: 2538 XXXXXXXXXXXEFMRLVNKEIKLYNSMVXXXXXXXXXXXXXAYRXXXXXXXXXXXXXXXX 2359
                        F+RLVNKEI+LYN MV             AYR                
Sbjct: 343  ASASSVSWEREAFLRLVNKEIELYNHMVEKEGTEDEEEAREAYRAARKDSDHAVEMAVAD 402

Query: 2358 KISSALIDRVDAMLQKLEKEIDDVDAEIGDRWRLLDRDYDGKVTPEEVAVAAAYLKDTLN 2179
            K SSALIDRVDAMLQKLEKEIDDVDA+IGDRWRLLDRDYDGKVTPEEVA A  YLKDTL 
Sbjct: 403  KASSALIDRVDAMLQKLEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEVASATMYLKDTLG 462

Query: 2178 KEGVQELISSLSKDRDGKILVEDIVKLGTQKEDVNA 2071
            K+G+QELIS+LSKD++GKI VEDI+KLG+++ED N+
Sbjct: 463  KDGIQELISNLSKDKEGKIRVEDIIKLGSEREDDNS 498



 Score =  234 bits (596), Expect = 2e-58
 Identities = 115/134 (85%), Positives = 125/134 (93%)
 Frame = -3

Query: 3458 LTARIEYAKFLQDTVKEMAKEVQNSRSGEIKKTAEDLDDFLSKVRKGARVSNEEILGFAK 3279
            L ARIEYAKFLQDTVKEMAKEVQNS SGEIKKTAEDLD F++KVR GA VSN+EILGFAK
Sbjct: 56   LNARIEYAKFLQDTVKEMAKEVQNSHSGEIKKTAEDLDQFMNKVRTGAGVSNDEILGFAK 115

Query: 3278 LFNDELTLDNINRPRLVNMCKYMGISPYGTDAYLRYALRKRLQWIKNDDKLIQAEGVDSL 3099
            LFNDELTLDNI+RPRLVNMCKYMGISPYGTDAYLRY LRKRLQWIKNDD++IQAEGV+SL
Sbjct: 116  LFNDELTLDNISRPRLVNMCKYMGISPYGTDAYLRYMLRKRLQWIKNDDRMIQAEGVESL 175

Query: 3098 SESELRQTVRERGI 3057
            SE+EL Q  R+RG+
Sbjct: 176  SEAELHQACRDRGL 189


>emb|CBI23351.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score =  283 bits (724), Expect = 2e-73
 Identities = 158/276 (57%), Positives = 187/276 (67%)
 Frame = -2

Query: 2898 RAFTVSGKLRPEEAVMNTMSSLPDEVVDTVQVTSLPSEDSVSERRRKLXXXXXXXXXXXX 2719
            RAFTVSGK++PEEAV  T+SSLPDEVVDTV VT+LPSEDSVSERRRKL            
Sbjct: 151  RAFTVSGKVKPEEAVQATLSSLPDEVVDTVGVTTLPSEDSVSERRRKLEFLEMQEELIKE 210

Query: 2718 XXXXXXXEKARLKGSDISQEDVALKEMESSTARDAQEQAPSEMLDKRDQLCXXXXXXXXX 2539
                    +AR+K S ++Q+DVAL+EM   TAR+AQEQA ++ L+K+ Q+C         
Sbjct: 211  EEEKEEEVQARIKESTVNQKDVALEEMTIPTAREAQEQAEAKTLEKQQQICELSRALVVL 270

Query: 2538 XXXXXXXXXXXEFMRLVNKEIKLYNSMVXXXXXXXXXXXXXAYRXXXXXXXXXXXXXXXX 2359
                        F+RLVNKEI+LYN MV             AYR                
Sbjct: 271  ASASSVSWEREAFLRLVNKEIELYNHMVEKEGTEDEEEAREAYRAARKDSDHAVEMAVAD 330

Query: 2358 KISSALIDRVDAMLQKLEKEIDDVDAEIGDRWRLLDRDYDGKVTPEEVAVAAAYLKDTLN 2179
            K SSALIDRVDAMLQKLEKEIDDVDA+IGDRWRLLDRDYDGKVTPEEVA A  YLKDTL 
Sbjct: 331  KASSALIDRVDAMLQKLEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEVASATMYLKDTLG 390

Query: 2178 KEGVQELISSLSKDRDGKILVEDIVKLGTQKEDVNA 2071
            K+G+QELIS+LSKD++GKI VEDI+KLG+++ED N+
Sbjct: 391  KDGIQELISNLSKDKEGKIRVEDIIKLGSEREDDNS 426



 Score =  204 bits (518), Expect = 2e-49
 Identities = 99/117 (84%), Positives = 109/117 (93%)
 Frame = -3

Query: 3407 MAKEVQNSRSGEIKKTAEDLDDFLSKVRKGARVSNEEILGFAKLFNDELTLDNINRPRLV 3228
            MAKEVQNS SGEIKKTAEDLD F++KVR GA VSN+EILGFAKLFNDELTLDNI+RPRLV
Sbjct: 1    MAKEVQNSHSGEIKKTAEDLDQFMNKVRTGAGVSNDEILGFAKLFNDELTLDNISRPRLV 60

Query: 3227 NMCKYMGISPYGTDAYLRYALRKRLQWIKNDDKLIQAEGVDSLSESELRQTVRERGI 3057
            NMCKYMGISPYGTDAYLRY LRKRLQWIKNDD++IQAEGV+SLSE+EL Q  R+RG+
Sbjct: 61   NMCKYMGISPYGTDAYLRYMLRKRLQWIKNDDRMIQAEGVESLSEAELHQACRDRGL 117


>ref|XP_002312206.1| predicted protein [Populus trichocarpa] gi|222852026|gb|EEE89573.1|
            predicted protein [Populus trichocarpa]
          Length = 687

 Score =  283 bits (723), Expect = 3e-73
 Identities = 163/280 (58%), Positives = 191/280 (68%)
 Frame = -2

Query: 2898 RAFTVSGKLRPEEAVMNTMSSLPDEVVDTVQVTSLPSEDSVSERRRKLXXXXXXXXXXXX 2719
            RAF++SGK+RPEEAV  T+SSLPDEVVDTV VT+LPSEDSVSERRRKL            
Sbjct: 405  RAFSISGKVRPEEAVQATLSSLPDEVVDTVGVTALPSEDSVSERRRKLEYLEMQEELIKE 464

Query: 2718 XXXXXXXEKARLKGSDISQEDVALKEMESSTARDAQEQAPSEMLDKRDQLCXXXXXXXXX 2539
                   E+A++K S  SQ+DVAL+EM   TARDA+EQA ++ L+K +QLC         
Sbjct: 465  EEEEEEEEQAKMKESVSSQKDVALEEMSIPTARDAREQAKAKTLEKHEQLCELSRALAVL 524

Query: 2538 XXXXXXXXXXXEFMRLVNKEIKLYNSMVXXXXXXXXXXXXXAYRXXXXXXXXXXXXXXXX 2359
                       EF+RLV KEI LYN+MV             AY+                
Sbjct: 525  ASASSVSREREEFLRLVKKEIDLYNNMVDKEGTEGEEEAKKAYKAAREESDQAAETAISD 584

Query: 2358 KISSALIDRVDAMLQKLEKEIDDVDAEIGDRWRLLDRDYDGKVTPEEVAVAAAYLKDTLN 2179
            KISSALI+RVDAMLQKLEKEIDDVDA+IGDRWRLLDRDYDGKVTPEEVA AA YLKD L 
Sbjct: 585  KISSALINRVDAMLQKLEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEVASAAMYLKDHLG 644

Query: 2178 KEGVQELISSLSKDRDGKILVEDIVKLGTQKEDVNAADEE 2059
            KEG+QELIS+LSKDR+GKILVEDIV+LG++ +D +AA EE
Sbjct: 645  KEGIQELISNLSKDREGKILVEDIVRLGSEMKDADAAAEE 684



 Score =  228 bits (581), Expect = 9e-57
 Identities = 113/134 (84%), Positives = 126/134 (94%)
 Frame = -3

Query: 3458 LTARIEYAKFLQDTVKEMAKEVQNSRSGEIKKTAEDLDDFLSKVRKGARVSNEEILGFAK 3279
            L ARIEYAKFLQDTVKEMAKEVQ SRSGE K+TAEDLD+F++KVR G+RVSNEEILGFAK
Sbjct: 238  LNARIEYAKFLQDTVKEMAKEVQTSRSGEAKQTAEDLDEFMNKVRTGSRVSNEEILGFAK 297

Query: 3278 LFNDELTLDNINRPRLVNMCKYMGISPYGTDAYLRYALRKRLQWIKNDDKLIQAEGVDSL 3099
            LFNDELTLDNI+RPRLVNMCKYMGISPYGTDAYLRY LR+RLQ IK+DDK+IQAEGV+SL
Sbjct: 298  LFNDELTLDNISRPRLVNMCKYMGISPYGTDAYLRYMLRRRLQEIKSDDKMIQAEGVESL 357

Query: 3098 SESELRQTVRERGI 3057
            SE+ELRQ  R+RG+
Sbjct: 358  SEAELRQACRDRGL 371


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