BLASTX nr result

ID: Coptis23_contig00005651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005651
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEN70936.1| lipid transfer protein [Gossypium gossypioides]        160   2e-37
gb|AAF35186.1|AF195865_1 lipid transfer protein precursor [Gossy...   160   2e-37
gb|AEN70916.1| lipid transfer protein [Gossypium laxum]               160   2e-37
gb|AAF35185.1|AF195864_1 lipid transfer protein precursor [Gossy...   160   3e-37
gb|AAG29777.1| lipid transfer protein 3 precursor [Gossypium hir...   159   6e-37

>gb|AEN70936.1| lipid transfer protein [Gossypium gossypioides]
          Length = 119

 Score =  160 bits (406), Expect = 2e-37
 Identities = 75/117 (64%), Positives = 92/117 (78%), Gaps = 1/117 (0%)
 Frame = -3

Query: 597 MACPMILKLTFVVLACMVVSAPYAEAAISCGFVVSKVSPCIPYLRG-GGPVPPACCYGVR 421
           M+  M LKL  VV+ CMV+ AP A+ A++CG V + ++PCI YLRG GGPVP  CC G++
Sbjct: 1   MSSSMSLKLACVVVLCMVLGAPLAQGAVTCGQVTTSLAPCITYLRGKGGPVPQGCCGGIK 60

Query: 420 TLNAAAQGTPDRQAACNCLKQAAAGISGINPAFAGGLPGRCGVSIPYKISPYTDCSR 250
           +LN+AAQ TPDRQAAC C+K AAAGISGIN   A GLPG+CGV+IPYKISP TDC+R
Sbjct: 61  SLNSAAQTTPDRQAACKCIKSAAAGISGINYGIASGLPGKCGVNIPYKISPSTDCNR 117


>gb|AAF35186.1|AF195865_1 lipid transfer protein precursor [Gossypium hirsutum]
           gi|208427033|gb|ACI26698.1| lipid transfer protein
           [Gossypium hirsutum]
          Length = 120

 Score =  160 bits (405), Expect = 2e-37
 Identities = 76/120 (63%), Positives = 91/120 (75%), Gaps = 2/120 (1%)
 Frame = -3

Query: 597 MACPMILKLTFVVLACMVVSAPYAEAAISCGFVVSKVSPCIPYLRG--GGPVPPACCYGV 424
           MA  M LKL  VV+ CMVV AP A+ A++CG V S ++PCI YLRG   G +PP CC G+
Sbjct: 1   MASSMYLKLACVVVLCMVVGAPLAQGAVTCGQVTSSLAPCINYLRGTGAGAIPPGCCSGI 60

Query: 423 RTLNAAAQGTPDRQAACNCLKQAAAGISGINPAFAGGLPGRCGVSIPYKISPYTDCSRVR 244
           ++LN+AAQ TPDRQAAC C+K AAAGI GIN   A GLPG+CGV+IPYKISP TDCS V+
Sbjct: 61  KSLNSAAQTTPDRQAACKCIKSAAAGIPGINFGLASGLPGKCGVNIPYKISPSTDCSSVK 120


>gb|AEN70916.1| lipid transfer protein [Gossypium laxum]
          Length = 120

 Score =  160 bits (405), Expect = 2e-37
 Identities = 76/118 (64%), Positives = 91/118 (77%), Gaps = 2/118 (1%)
 Frame = -3

Query: 597 MACPMILKLTFVVLACMVVSAPYAEAAISCGFVVSKVSPCIPYLRGGGP--VPPACCYGV 424
           MA  M LKL  VV+ CMVV AP A+ A++CG V + ++PCI YLRG G   VPP CC G+
Sbjct: 1   MASSMSLKLACVVVLCMVVGAPLAQGAVTCGQVTTSLAPCITYLRGNGAAAVPPGCCGGI 60

Query: 423 RTLNAAAQGTPDRQAACNCLKQAAAGISGINPAFAGGLPGRCGVSIPYKISPYTDCSR 250
           ++LN+AAQ TPDRQAAC C+K AAAGISGIN   A GLPG+CGV+IPYKISP TDC+R
Sbjct: 61  KSLNSAAQTTPDRQAACKCIKSAAAGISGINYGIASGLPGKCGVNIPYKISPSTDCNR 118


>gb|AAF35185.1|AF195864_1 lipid transfer protein precursor [Gossypium hirsutum]
          Length = 120

 Score =  160 bits (404), Expect = 3e-37
 Identities = 75/120 (62%), Positives = 93/120 (77%), Gaps = 2/120 (1%)
 Frame = -3

Query: 597 MACPMILKLTFVVLACMVVSAPYAEAAISCGFVVSKVSPCIPYLRGGGP--VPPACCYGV 424
           MA  M LKLT VV+ CMVV AP A+ AISCG + S ++PCI YL+G G    PPACC G+
Sbjct: 1   MASSMSLKLTCVVVFCMVVGAPLAQGAISCGQITSALAPCIAYLKGNGAGSAPPACCNGI 60

Query: 423 RTLNAAAQGTPDRQAACNCLKQAAAGISGINPAFAGGLPGRCGVSIPYKISPYTDCSRVR 244
           R+LN+AA+ TPDRQAAC+C+K AA GISGIN + A GLPG+CG++IPYKISP TDC  ++
Sbjct: 61  RSLNSAAKTTPDRQAACSCIKSAATGISGINYSTAAGLPGKCGINIPYKISPSTDCKSIK 120


>gb|AAG29777.1| lipid transfer protein 3 precursor [Gossypium hirsutum]
           gi|208427031|gb|ACI26697.1| lipid transfer protein
           [Gossypium hirsutum]
          Length = 120

 Score =  159 bits (401), Expect = 6e-37
 Identities = 75/120 (62%), Positives = 92/120 (76%), Gaps = 2/120 (1%)
 Frame = -3

Query: 597 MACPMILKLTFVVLACMVVSAPYAEAAISCGFVVSKVSPCIPYLRGGGP--VPPACCYGV 424
           MA  M LKL  VV+ CMVV AP A+ A++CG V + ++PCI YLRG G   VPP CC G+
Sbjct: 1   MASSMSLKLACVVVLCMVVGAPLAQGAVTCGQVTNSLAPCINYLRGSGAGAVPPGCCSGI 60

Query: 423 RTLNAAAQGTPDRQAACNCLKQAAAGISGINPAFAGGLPGRCGVSIPYKISPYTDCSRVR 244
           ++LN+AAQ TPDRQAAC C+K AAAGI+GIN   A GLPG+CGV+IPYKISP TDC+ V+
Sbjct: 61  KSLNSAAQTTPDRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 120


Top