BLASTX nr result
ID: Coptis23_contig00005642
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00005642 (2289 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003631537.1| PREDICTED: F-box/LRR-repeat protein 10-like ... 752 0.0 ref|XP_003631565.1| PREDICTED: F-box/LRR-repeat protein 10-like ... 746 0.0 ref|XP_003592693.1| F-box/LRR-repeat protein [Medicago truncatul... 731 0.0 ref|XP_002312937.1| f-box family protein [Populus trichocarpa] g... 730 0.0 ref|XP_002306206.1| predicted protein [Populus trichocarpa] gi|2... 725 0.0 >ref|XP_003631537.1| PREDICTED: F-box/LRR-repeat protein 10-like [Vitis vinifera] Length = 719 Score = 752 bits (1941), Expect = 0.0 Identities = 388/605 (64%), Positives = 461/605 (76%), Gaps = 1/605 (0%) Frame = -3 Query: 2266 VSNATEAGG-LDLLPTALLASIMTKLDIPSICSAAATCKTFNACVSQILSFLPNFHLLDV 2090 ++N+ AGG L+ LP ALLA+IMTKLD+ SI S A+TC T +C SQI FLPNFHLLDV Sbjct: 1 MANSEAAGGALEQLPAALLATIMTKLDVSSIRSLASTCTTIRSCASQIFHFLPNFHLLDV 60 Query: 2089 AXXXXXXXXXXXXXXXXXXLKIDCSRLDDSSIDNLIRPSLHELCLHNCEDFTGDLISAIG 1910 A LK+DCS+LDDSSI++L+RPSLHE+ L NC DF+G L+S IG Sbjct: 61 ALSINLLRPLLPPNPYLRSLKVDCSKLDDSSIEHLVRPSLHEISLLNCADFSGRLLSLIG 120 Query: 1909 KQCRDLRSLYLGSVAERRGHAIDVSDXXXXXXXXXXXXXXXLMFDVSLVLRYSFARLWLV 1730 QC+DLRSLYLG VAE+RG A+ +S+ LMFD+SL RY+FAR W + Sbjct: 121 GQCKDLRSLYLGCVAEKRGRAVHISNLEELLCGCTELKTLSLMFDISLFPRYNFARAWSL 180 Query: 1729 ASTHLTTLEIGYIPSVMVTESXXXXXXXXXXXXXXXXXLIPGIQKLCLSVDYITDNMVGT 1550 AS +LT+LEIGY+ SVMVTE ++P +Q+LCLSVDYITD MV T Sbjct: 181 ASENLTSLEIGYVSSVMVTELLSPNVGPHQPPNHLQPSILPSLQRLCLSVDYITDTMVET 240 Query: 1549 ISKCLVNLIHLDLRDAPVLEPTGAFDLTNSGLQQINQSGKLKLLSLVRSQEYLHTYFKRV 1370 +SKCL+NL HLDLRDAP++EP FDLTNSG QQINQ GKLK LSLVRSQE+L TYFKRV Sbjct: 241 VSKCLINLTHLDLRDAPIIEPRVTFDLTNSGFQQINQRGKLKHLSLVRSQEFLITYFKRV 300 Query: 1369 NDLGLLLMADKCSNMESICLGGFCRVTDTGFRAILHQCSSLQKLKLCHGTQLTDLVFHDI 1190 NDLG+LLMAD+CS+MESICLGGFCRVTD+GF+ ILH CS+L KL++ HG LT+LVF DI Sbjct: 301 NDLGILLMADRCSSMESICLGGFCRVTDSGFKTILHSCSTLYKLRVSHGMLLTNLVFLDI 360 Query: 1189 SATSLSLINVSLRWCNLLTNQAVVRLAYNMDLRVLDLRVCRNIGDEALKAIGSLRKLMVL 1010 SATSLSL +VSLRWCNLL NQAV+ LA N+DLRVLDLR CRN+GDEAL+AI +L KL +L Sbjct: 361 SATSLSLTHVSLRWCNLLRNQAVISLASNLDLRVLDLRDCRNLGDEALQAISTLHKLKIL 420 Query: 1009 LLDGSDISDTGLLYLGQRVMRSLVTLSIRSCRRLTDKCISVIFDGTSGKALQSLDLSNIP 830 LLDGSDI+D GL YL + V+ SLV+LSIR C+RLTDKCIS +FD +S + LQ LDLSN+P Sbjct: 421 LLDGSDITDAGLSYLREGVIGSLVSLSIRGCKRLTDKCISALFDPSSKQELQELDLSNLP 480 Query: 829 NLTDNVILLLAKSRVPISELRIRECPRISDMSVMALASMQVEYGGWHGSRLCLMDLYGCK 650 NL+DN I LAKSRVPI ELR+R+CP I D S+MALASMQV+ HGS L ++DLY C Sbjct: 481 NLSDNGIFSLAKSRVPILELRMRQCPLIGDTSIMALASMQVDDHRSHGSSLRVLDLYNCG 540 Query: 649 GITPLAFRWFKKPYFPRLRWFGLTGSLNRDLVDALARSRPFLHMACRGEELGTRYGDSLD 470 GIT L+FRW K PYFPRLRW G+TGS+NRD+VDALARSRPFLH+AC GEELGT D D Sbjct: 541 GITSLSFRWLKNPYFPRLRWLGVTGSVNRDMVDALARSRPFLHVACHGEELGT---DHWD 597 Query: 469 GLERH 455 GL H Sbjct: 598 GLYMH 602 >ref|XP_003631565.1| PREDICTED: F-box/LRR-repeat protein 10-like [Vitis vinifera] Length = 640 Score = 746 bits (1927), Expect = 0.0 Identities = 388/608 (63%), Positives = 461/608 (75%), Gaps = 4/608 (0%) Frame = -3 Query: 2266 VSNATEAGG-LDLLPTALLASIMTKLDIPSICSAAATCKTFNACVSQILSFLPNFHLLDV 2090 ++N+ AGG L+ LP ALLA+IMTKLD+ SI S A+TC T +C SQI FLPNFHLLDV Sbjct: 1 MANSEAAGGALEQLPAALLATIMTKLDVSSIRSLASTCTTIRSCASQIFHFLPNFHLLDV 60 Query: 2089 AXXXXXXXXXXXXXXXXXXLKIDCSRLDDSSIDNLIRPSLHELCLHNCEDFTGDLISAIG 1910 A LK+DCS+LDDSSI++L+RPSLHE+ L NC DF+G L+S IG Sbjct: 61 ALSINLLRPLLPPNPYLRSLKVDCSKLDDSSIEHLVRPSLHEISLLNCADFSGRLLSLIG 120 Query: 1909 KQCRDLRSLYLGSVAERRGHAIDVSDXXXXXXXXXXXXXXXLMFDVSLVLRYSFARLWLV 1730 QC+DLRSLYLG VAE+RG A+ +S+ LMFD+SL RY+FAR W + Sbjct: 121 GQCKDLRSLYLGCVAEKRGRAVHISNLEELLCGCTELKTLSLMFDISLFPRYNFARAWSL 180 Query: 1729 ASTHLTTLEI---GYIPSVMVTESXXXXXXXXXXXXXXXXXLIPGIQKLCLSVDYITDNM 1559 AS +LT+LEI GY+ SVMVTE ++P +Q+LCLSVDYITD M Sbjct: 181 ASKNLTSLEIAYIGYVSSVMVTELLSPNVGPHQPPNHLRPSILPSLQRLCLSVDYITDTM 240 Query: 1558 VGTISKCLVNLIHLDLRDAPVLEPTGAFDLTNSGLQQINQSGKLKLLSLVRSQEYLHTYF 1379 V T+SKCL+NL HLDLRDAP++EP FDLTNSG QQINQ GKLK LSLVRSQE+L TYF Sbjct: 241 VETVSKCLINLTHLDLRDAPIIEPRVTFDLTNSGFQQINQRGKLKHLSLVRSQEFLITYF 300 Query: 1378 KRVNDLGLLLMADKCSNMESICLGGFCRVTDTGFRAILHQCSSLQKLKLCHGTQLTDLVF 1199 KRVNDLG+LLMAD+CS+MESICLGGFCRVTD+GF+ ILH CS+L KL++ HG LT+LVF Sbjct: 301 KRVNDLGILLMADRCSSMESICLGGFCRVTDSGFKTILHSCSTLYKLRVSHGMLLTNLVF 360 Query: 1198 HDISATSLSLINVSLRWCNLLTNQAVVRLAYNMDLRVLDLRVCRNIGDEALKAIGSLRKL 1019 DISATSLSL +VSLRWCNLL NQAV+ LA N+DLRVLDLR CRN+GDEAL+AI +L KL Sbjct: 361 LDISATSLSLTHVSLRWCNLLRNQAVISLASNLDLRVLDLRDCRNLGDEALQAISTLHKL 420 Query: 1018 MVLLLDGSDISDTGLLYLGQRVMRSLVTLSIRSCRRLTDKCISVIFDGTSGKALQSLDLS 839 +LLLDGSDI+D GL YL + V+ SLV+LSIR C+RLTDKCIS +FD +S + LQ LDLS Sbjct: 421 KILLLDGSDITDAGLSYLREGVIGSLVSLSIRGCKRLTDKCISALFDPSSKQELQELDLS 480 Query: 838 NIPNLTDNVILLLAKSRVPISELRIRECPRISDMSVMALASMQVEYGGWHGSRLCLMDLY 659 N+PNL+DN I LAKSRVPI ELR+R+CP I D S+MALASMQV+ HGS L ++DLY Sbjct: 481 NLPNLSDNGIFSLAKSRVPILELRMRQCPLIGDSSIMALASMQVDDHRSHGSSLRVLDLY 540 Query: 658 GCKGITPLAFRWFKKPYFPRLRWFGLTGSLNRDLVDALARSRPFLHMACRGEELGTRYGD 479 C GIT L+FRW K PYFPRLRW G+TGS+NRD+VDALARSRPFLH+AC GEELGT D Sbjct: 541 NCGGITSLSFRWLKNPYFPRLRWLGVTGSVNRDMVDALARSRPFLHVACHGEELGT---D 597 Query: 478 SLDGLERH 455 DGL H Sbjct: 598 HWDGLYMH 605 >ref|XP_003592693.1| F-box/LRR-repeat protein [Medicago truncatula] gi|358345302|ref|XP_003636720.1| F-box/LRR-repeat protein [Medicago truncatula] gi|355481741|gb|AES62944.1| F-box/LRR-repeat protein [Medicago truncatula] gi|355502655|gb|AES83858.1| F-box/LRR-repeat protein [Medicago truncatula] Length = 643 Score = 731 bits (1887), Expect = 0.0 Identities = 374/595 (62%), Positives = 441/595 (74%) Frame = -3 Query: 2239 LDLLPTALLASIMTKLDIPSICSAAATCKTFNACVSQILSFLPNFHLLDVAXXXXXXXXX 2060 LD LP ALLA+IMTKLD+ SICS A T TF +C ILSFLPNFHL+DVA Sbjct: 9 LDQLPHALLATIMTKLDVASICSLATTASTFRSCAKHILSFLPNFHLIDVAPSGNLLTPL 68 Query: 2059 XXXXXXXXXLKIDCSRLDDSSIDNLIRPSLHELCLHNCEDFTGDLISAIGKQCRDLRSLY 1880 LK+DC RLDDSSI L++PSLHEL L+NC DF+G L+S IG QC+DLRSLY Sbjct: 69 LPRNPYLKSLKVDCDRLDDSSISLLVKPSLHELSLYNCSDFSGKLLSEIGTQCKDLRSLY 128 Query: 1879 LGSVAERRGHAIDVSDXXXXXXXXXXXXXXXLMFDVSLVLRYSFARLWLVASTHLTTLEI 1700 LGSVAE+RG +I +SD LMFDVSL LR++ AR+W AS LT+LEI Sbjct: 129 LGSVAEKRGRSIHISDLEELLTGCSQLEVLILMFDVSLFLRHNLARVWASASEKLTSLEI 188 Query: 1699 GYIPSVMVTESXXXXXXXXXXXXXXXXXLIPGIQKLCLSVDYITDNMVGTISKCLVNLIH 1520 GYI SV V E ++PGIQKLCLSV+YITD MV TISK LV L H Sbjct: 189 GYISSVTVIELFSSNLGSHQPLNPIQPSILPGIQKLCLSVNYITDAMVNTISKGLVFLTH 248 Query: 1519 LDLRDAPVLEPTGAFDLTNSGLQQINQSGKLKLLSLVRSQEYLHTYFKRVNDLGLLLMAD 1340 LDLRDAP +EP FDLTN+GLQQINQ G+LK LSL+RSQE++ YF+RVNDLGLLLMAD Sbjct: 249 LDLRDAPFVEPRITFDLTNAGLQQINQHGRLKHLSLIRSQEFIICYFRRVNDLGLLLMAD 308 Query: 1339 KCSNMESICLGGFCRVTDTGFRAILHQCSSLQKLKLCHGTQLTDLVFHDISATSLSLINV 1160 KC+NMESICLGGFCRVTDTG + ILH CS L KLK+ HGTQLTDLVFHDISATSL+L +V Sbjct: 309 KCANMESICLGGFCRVTDTGIKTILHSCSRLYKLKVTHGTQLTDLVFHDISATSLTLTHV 368 Query: 1159 SLRWCNLLTNQAVVRLAYNMDLRVLDLRVCRNIGDEALKAIGSLRKLMVLLLDGSDISDT 980 SLRWC LLTN +V L N +L+VLDLR CR++GDEAL+AIG L +L +LL+DGSDI+D Sbjct: 369 SLRWCKLLTNHSVFSLTSNKELKVLDLRDCRSLGDEALRAIGILLRLKILLIDGSDITDA 428 Query: 979 GLLYLGQRVMRSLVTLSIRSCRRLTDKCISVIFDGTSGKALQSLDLSNIPNLTDNVILLL 800 GL YL V+ SL LS+R C+RLTDKCI+V+FDG L+ LDLSN+PNL+DN +L L Sbjct: 429 GLSYLRSTVINSLYALSLRGCKRLTDKCITVLFDGCGKLELRDLDLSNLPNLSDNGVLEL 488 Query: 799 AKSRVPISELRIRECPRISDMSVMALASMQVEYGGWHGSRLCLMDLYGCKGITPLAFRWF 620 AKSR+P +LR+R+CP I D S+MALASM + GW+ S L L+D+Y C GITPLAFRW Sbjct: 489 AKSRIPFLDLRMRQCPLIGDTSIMALASMMTDDAGWYESGLRLLDMYNCGGITPLAFRWL 548 Query: 619 KKPYFPRLRWFGLTGSLNRDLVDALARSRPFLHMACRGEELGTRYGDSLDGLERH 455 KKPYFPRL+W G+TGS+NRD+VDALARSRPFL++AC GEELG D DGL H Sbjct: 549 KKPYFPRLKWLGVTGSVNRDMVDALARSRPFLYVACNGEELGPDPCDMSDGLYTH 603 >ref|XP_002312937.1| f-box family protein [Populus trichocarpa] gi|222849345|gb|EEE86892.1| f-box family protein [Populus trichocarpa] Length = 644 Score = 730 bits (1885), Expect = 0.0 Identities = 376/599 (62%), Positives = 450/599 (75%) Frame = -3 Query: 2251 EAGGLDLLPTALLASIMTKLDIPSICSAAATCKTFNACVSQILSFLPNFHLLDVAXXXXX 2072 E G LD LP +L +I++KLD+ SICS ++TCKTFNAC S IL+F+P+F LLD+A Sbjct: 8 EEGSLDQLPATVLETIVSKLDVASICSVSSTCKTFNACASHILTFIPSFDLLDIAPSIDL 67 Query: 2071 XXXXXXXXXXXXXLKIDCSRLDDSSIDNLIRPSLHELCLHNCEDFTGDLISAIGKQCRDL 1892 LK+DC RLDDS+I+ ++R SLHEL LHNC DF+G L+S IG +C DL Sbjct: 68 LRPLLPPNPYLKSLKLDCGRLDDSAINVVVRDSLHELYLHNCADFSGKLLSEIGGKCADL 127 Query: 1891 RSLYLGSVAERRGHAIDVSDXXXXXXXXXXXXXXXLMFDVSLVLRYSFARLWLVASTHLT 1712 R LYLGSVAE+RG AI +SD LMFDVSL LR++FA +W + S LT Sbjct: 128 RYLYLGSVAEKRGRAIHISDLEELLRGCTRLEALILMFDVSLFLRHNFALVWALVSEKLT 187 Query: 1711 TLEIGYIPSVMVTESXXXXXXXXXXXXXXXXXLIPGIQKLCLSVDYITDNMVGTISKCLV 1532 +LEIGY+ SVMVTE ++PGIQKLCLSVDYITD MV TISK L+ Sbjct: 188 SLEIGYVSSVMVTELVGPSLGPHQSPNHVRPSILPGIQKLCLSVDYITDTMVSTISKGLM 247 Query: 1531 NLIHLDLRDAPVLEPTGAFDLTNSGLQQINQSGKLKLLSLVRSQEYLHTYFKRVNDLGLL 1352 +L HLDLRDAP++EPT FDLTNSGLQQINQ GKLK LSLVRSQE+ TYF+RVNDLG+L Sbjct: 248 SLTHLDLRDAPLIEPTITFDLTNSGLQQINQHGKLKHLSLVRSQEFAITYFRRVNDLGML 307 Query: 1351 LMADKCSNMESICLGGFCRVTDTGFRAILHQCSSLQKLKLCHGTQLTDLVFHDISATSLS 1172 LMADKC NMESICLGGFCRVTDTGF+ ILH CSSL KL++ +G LTDLVFHDISATSLS Sbjct: 308 LMADKCENMESICLGGFCRVTDTGFKTILHSCSSLYKLQVSYGIHLTDLVFHDISATSLS 367 Query: 1171 LINVSLRWCNLLTNQAVVRLAYNMDLRVLDLRVCRNIGDEALKAIGSLRKLMVLLLDGSD 992 LI+VSLRWCNLLTN A+ L N LRVLDLR C++ GDEAL+AI +L +L +LLLDGS+ Sbjct: 368 LIHVSLRWCNLLTNHAIKNLVLNTRLRVLDLRDCKHFGDEALRAISALLELKILLLDGSN 427 Query: 991 ISDTGLLYLGQRVMRSLVTLSIRSCRRLTDKCISVIFDGTSGKALQSLDLSNIPNLTDNV 812 ISD GL YL + ++ SLV+LS+R C+RLTDKCIS +F+G+S LQ LDLSN+PNL+DN Sbjct: 428 ISDFGLSYL-RGIINSLVSLSVRGCKRLTDKCISALFEGSSKLKLQQLDLSNLPNLSDNG 486 Query: 811 ILLLAKSRVPISELRIRECPRISDMSVMALASMQVEYGGWHGSRLCLMDLYGCKGITPLA 632 +L LAK RVPISELR+R+CP I D SVMALASM+V+ HG L L+DLY C GIT L+ Sbjct: 487 VLALAKCRVPISELRMRQCPLIGDTSVMALASMRVDEDRLHGCSLRLLDLYNCGGITQLS 546 Query: 631 FRWFKKPYFPRLRWFGLTGSLNRDLVDALARSRPFLHMACRGEELGTRYGDSLDGLERH 455 FRW KKPYFPRLR G+TGS +RD++DALARSRPFLH+AC EELG+ D+L GL H Sbjct: 547 FRWLKKPYFPRLRCLGVTGSASRDIIDALARSRPFLHVACHAEELGSNQWDNLHGLYMH 605 >ref|XP_002306206.1| predicted protein [Populus trichocarpa] gi|222849170|gb|EEE86717.1| predicted protein [Populus trichocarpa] Length = 643 Score = 725 bits (1872), Expect = 0.0 Identities = 372/608 (61%), Positives = 453/608 (74%) Frame = -3 Query: 2278 KKEMVSNATEAGGLDLLPTALLASIMTKLDIPSICSAAATCKTFNACVSQILSFLPNFHL 2099 ++E E LD LP +LA+I++KLD+ SICS A+TCKTFNAC S IL+F+P+F L Sbjct: 5 EEEEEEQKEEEDSLDQLPGTVLATIISKLDVASICSVASTCKTFNACASHILTFIPSFQL 64 Query: 2098 LDVAXXXXXXXXXXXXXXXXXXLKIDCSRLDDSSIDNLIRPSLHELCLHNCEDFTGDLIS 1919 LD+A LK+DC+RLDDS+I+ +R SLHEL L NC +F+G L+S Sbjct: 65 LDIAPSIDLLKPLMPPNPYLKSLKLDCARLDDSAINVFVRDSLHELYLRNCANFSGKLLS 124 Query: 1918 AIGKQCRDLRSLYLGSVAERRGHAIDVSDXXXXXXXXXXXXXXXLMFDVSLVLRYSFARL 1739 IG +C DLR LYLGSVAE+RG I +SD LMFDV L LR+ FA++ Sbjct: 125 EIGGKCADLRYLYLGSVAEKRGRPIHISDLEELLRGCTQLEELILMFDVPLFLRHKFAQV 184 Query: 1738 WLVASTHLTTLEIGYIPSVMVTESXXXXXXXXXXXXXXXXXLIPGIQKLCLSVDYITDNM 1559 W +AS LT+LEIG + SVMVTE ++PGIQKLCLSVDYITD M Sbjct: 185 WALASEKLTSLEIGCVSSVMVTELLSPSLGHHRSPNHVRPPILPGIQKLCLSVDYITDTM 244 Query: 1558 VGTISKCLVNLIHLDLRDAPVLEPTGAFDLTNSGLQQINQSGKLKLLSLVRSQEYLHTYF 1379 V TIS L++L HLDLRDAP++EP+ A+DLTNSGLQQINQ GKLK LSLVRSQE+L TYF Sbjct: 245 VSTISNVLMSLTHLDLRDAPLIEPSSAYDLTNSGLQQINQHGKLKHLSLVRSQEFLITYF 304 Query: 1378 KRVNDLGLLLMADKCSNMESICLGGFCRVTDTGFRAILHQCSSLQKLKLCHGTQLTDLVF 1199 +RVNDLG+LLMADKC+NMESICLGGFCRVTDTGF+ ILH CSSL KL++ +GT LTDLVF Sbjct: 305 RRVNDLGMLLMADKCANMESICLGGFCRVTDTGFKTILHSCSSLYKLRVSYGTHLTDLVF 364 Query: 1198 HDISATSLSLINVSLRWCNLLTNQAVVRLAYNMDLRVLDLRVCRNIGDEALKAIGSLRKL 1019 HDISATSLSL +VSLRWCNLLTN A+ L N L++LDLR C+++GD AL++I +L +L Sbjct: 365 HDISATSLSLTHVSLRWCNLLTNHAIKNLVSNTCLKILDLRDCKHLGDGALRSISTLPEL 424 Query: 1018 MVLLLDGSDISDTGLLYLGQRVMRSLVTLSIRSCRRLTDKCISVIFDGTSGKALQSLDLS 839 +LLLDGSDISD GL YL + V+ SLV+LS+R C+RLTDKCIS +F+G+S LQ LDLS Sbjct: 425 KILLLDGSDISDFGLSYL-RGVINSLVSLSVRGCKRLTDKCISALFEGSSKLELQQLDLS 483 Query: 838 NIPNLTDNVILLLAKSRVPISELRIRECPRISDMSVMALASMQVEYGGWHGSRLCLMDLY 659 N+PNL+DN +L LAK RVPISELR+R+CP I D SVMALASMQV+ WHG RL L+DLY Sbjct: 484 NLPNLSDNGVLTLAKCRVPISELRMRQCPLIGDASVMALASMQVDEDRWHGCRLRLLDLY 543 Query: 658 GCKGITPLAFRWFKKPYFPRLRWFGLTGSLNRDLVDALARSRPFLHMACRGEELGTRYGD 479 C GIT L+F W KKPYFPRLRW G+TGS++RD+VDALAR+RPFL +AC EELG+ D Sbjct: 544 NCGGITQLSFWWLKKPYFPRLRWLGVTGSVSRDIVDALARNRPFLRVACHAEELGSNQWD 603 Query: 478 SLDGLERH 455 + GL H Sbjct: 604 NSHGLYMH 611