BLASTX nr result

ID: Coptis23_contig00005639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005639
         (1186 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADV59379.1| GAGA-binding transcriptional activator [Aquilegia...   331   2e-88
ref|XP_002519003.1| conserved hypothetical protein [Ricinus comm...   210   6e-52
gb|ADV59347.1| GAGA-binding transcriptional activator [Populus t...   194   3e-47
ref|XP_002326756.1| predicted protein [Populus trichocarpa] gi|2...   194   3e-47
ref|XP_002879557.1| GAGA-binding transcriptional activator [Arab...   191   2e-46

>gb|ADV59379.1| GAGA-binding transcriptional activator [Aquilegia viridiflora]
          Length = 270

 Score =  331 bits (848), Expect = 2e-88
 Identities = 167/228 (73%), Positives = 179/228 (78%), Gaps = 2/228 (0%)
 Frame = -2

Query: 1185 SMIPEAEEEGSGMEFDNHVWVHQRNFFSETKVNSDSLESTQINTETGLPPAPISMYMPTT 1006
            SMIPEAE  GSGMEF +HVWVHQRNF S  K N DSL  TQINTETGLP  PISM+ PT 
Sbjct: 45   SMIPEAE--GSGMEFGSHVWVHQRNFLSAAKTNPDSLHCTQINTETGLPAVPISMFKPTN 102

Query: 1005 RPSKNEELGTXXXXXXXXXXXXXSNGV--KPFKVKIPKKRADASMKKKRDSVSNATQKRS 832
             P+ + E                SNGV  KP K K PKK +DAS KKK DS S   QKR+
Sbjct: 103  GPTNDTEHVNNSSKIRKQSFTKKSNGVASKPSKPKQPKKPSDASTKKKGDSTSTVKQKRN 162

Query: 831  LDVVIDGTTIDFSQVPAPVCSCTGVYRQCYRWGAGGWQSSCCTTSISEYPLPLSSSRPGA 652
            LD VIDGTTIDFSQ+P+PVCSCTG +RQCYRWGAGGWQSSCCTTSISEYPLP+SSSRPGA
Sbjct: 163  LDFVIDGTTIDFSQMPSPVCSCTGAFRQCYRWGAGGWQSSCCTTSISEYPLPMSSSRPGA 222

Query: 651  RLAGRKMSNGAYAKLLQRLAAEGYVFSDAVDLKDHWAKHGTNKFVTIK 508
            R+AGRKMSNGAY KLLQRLAA+GY FSDAVDLKDHWAKHGTNKFVTIK
Sbjct: 223  RMAGRKMSNGAYGKLLQRLAADGYDFSDAVDLKDHWAKHGTNKFVTIK 270


>ref|XP_002519003.1| conserved hypothetical protein [Ricinus communis]
            gi|223541990|gb|EEF43536.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 230

 Score =  210 bits (534), Expect = 6e-52
 Identities = 114/229 (49%), Positives = 144/229 (62%), Gaps = 4/229 (1%)
 Frame = -2

Query: 1182 MIPEAEEEGSGMEFDNHVWVHQRNFFSETKVNSDSLESTQINTETGLPPAPISMYMPTTR 1003
            +IPEA    +G    +  W +  +F+S  K NS   + +QI+ E  LP  PI    P   
Sbjct: 10   LIPEAS---TGASLPHFAWFYPGSFYSAPKTNSIHSQGSQID-EPILPVPPICSIAPAAE 65

Query: 1002 PSKNEELGTXXXXXXXXXXXXXSNGVKP---FKVKIPKKRADASMKKKRDSVSNAT-QKR 835
            P+KN   G               +   P   FK+K P+K +    KKK  S+  A  +KR
Sbjct: 66   PAKNNNSGAKPAKARKQKPSAKGSNQIPSKTFKLKQPRKTS----KKKGQSMPEAKREKR 121

Query: 834  SLDVVIDGTTIDFSQVPAPVCSCTGVYRQCYRWGAGGWQSSCCTTSISEYPLPLSSSRPG 655
            +++V I     D S VP+P CSCTG+ R CY+WGAGGWQSSCCTT+ISEYPLP+S++RPG
Sbjct: 122  NINVDIGRMNFDLSGVPSPFCSCTGMPRVCYKWGAGGWQSSCCTTNISEYPLPMSAARPG 181

Query: 654  ARLAGRKMSNGAYAKLLQRLAAEGYVFSDAVDLKDHWAKHGTNKFVTIK 508
            AR+AGRKMSNGAY KLL +LAAEGY  S  VDLK+HWA+HGTNKFVTIK
Sbjct: 182  ARMAGRKMSNGAYLKLLLKLAAEGYDLSHPVDLKEHWARHGTNKFVTIK 230


>gb|ADV59347.1| GAGA-binding transcriptional activator [Populus trichocarpa]
            gi|319718093|gb|ADV59348.1| GAGA-binding transcriptional
            activator [Populus trichocarpa]
          Length = 224

 Score =  194 bits (494), Expect = 3e-47
 Identities = 107/227 (47%), Positives = 135/227 (59%), Gaps = 2/227 (0%)
 Frame = -2

Query: 1182 MIPEAEEEGSGMEFDNHVWVHQRNFFSETKVNSDSLESTQINTETGLPPAPISMYMPTTR 1003
            +IPEA          N  W +  +FFS  K NS   + TQI+ + GLP API        
Sbjct: 11   LIPEA----------NFSWFYPGSFFSSLKTNS-GFDRTQIDPQPGLPVAPIHSISSADL 59

Query: 1002 PSKNEELGTXXXXXXXXXXXXXSNGVKPFKVKIPKKRADASMKKKRDSVSNAT--QKRSL 829
               N   GT              +   P KV  PK+    S KK +  ++     +K++L
Sbjct: 60   AKSNS--GTKPTKARKHKSAAKDSNQIPPKVLGPKQPKKISSKKTKGQITLEAKHEKKNL 117

Query: 828  DVVIDGTTIDFSQVPAPVCSCTGVYRQCYRWGAGGWQSSCCTTSISEYPLPLSSSRPGAR 649
            D+ I     D S VP+P CSCTG+ R CY+WGAGGWQSSCCT SISE+PLP+SS+RPG R
Sbjct: 118  DIDIGKINFDPSGVPSPFCSCTGMPRVCYKWGAGGWQSSCCTDSISEHPLPMSSTRPGVR 177

Query: 648  LAGRKMSNGAYAKLLQRLAAEGYVFSDAVDLKDHWAKHGTNKFVTIK 508
            +AGRKMSNGAY KLL +L+AE Y  S  +D+K+HWA+HGTNKFVTIK
Sbjct: 178  MAGRKMSNGAYVKLLLKLSAESYNLSHPLDMKNHWARHGTNKFVTIK 224


>ref|XP_002326756.1| predicted protein [Populus trichocarpa] gi|222834078|gb|EEE72555.1|
            predicted protein [Populus trichocarpa]
          Length = 222

 Score =  194 bits (494), Expect = 3e-47
 Identities = 107/227 (47%), Positives = 135/227 (59%), Gaps = 2/227 (0%)
 Frame = -2

Query: 1182 MIPEAEEEGSGMEFDNHVWVHQRNFFSETKVNSDSLESTQINTETGLPPAPISMYMPTTR 1003
            +IPEA          N  W +  +FFS  K NS   + TQI+ + GLP API        
Sbjct: 9    LIPEA----------NFSWFYPGSFFSSLKTNS-GFDRTQIDPQPGLPVAPIHSISSADL 57

Query: 1002 PSKNEELGTXXXXXXXXXXXXXSNGVKPFKVKIPKKRADASMKKKRDSVSNAT--QKRSL 829
               N   GT              +   P KV  PK+    S KK +  ++     +K++L
Sbjct: 58   AKSNS--GTKPTKARKHKSAAKDSNQIPPKVLGPKQPKKISSKKTKGQITLEAKHEKKNL 115

Query: 828  DVVIDGTTIDFSQVPAPVCSCTGVYRQCYRWGAGGWQSSCCTTSISEYPLPLSSSRPGAR 649
            D+ I     D S VP+P CSCTG+ R CY+WGAGGWQSSCCT SISE+PLP+SS+RPG R
Sbjct: 116  DIDIGKINFDPSGVPSPFCSCTGMPRVCYKWGAGGWQSSCCTDSISEHPLPMSSTRPGVR 175

Query: 648  LAGRKMSNGAYAKLLQRLAAEGYVFSDAVDLKDHWAKHGTNKFVTIK 508
            +AGRKMSNGAY KLL +L+AE Y  S  +D+K+HWA+HGTNKFVTIK
Sbjct: 176  MAGRKMSNGAYVKLLLKLSAESYNLSHPLDMKNHWARHGTNKFVTIK 222


>ref|XP_002879557.1| GAGA-binding transcriptional activator [Arabidopsis lyrata subsp.
            lyrata] gi|297325396|gb|EFH55816.1| GAGA-binding
            transcriptional activator [Arabidopsis lyrata subsp.
            lyrata]
          Length = 226

 Score =  191 bits (486), Expect = 2e-46
 Identities = 103/220 (46%), Positives = 133/220 (60%), Gaps = 2/220 (0%)
 Frame = -2

Query: 1161 EGSGMEFDNHVWVHQRNFFSETKVNSDSLESTQINTETGLPPAPISMYMPTTRPSKNEEL 982
            +G+G+   N  W+H      +T      ++ +Q N   G+      ++ P TR S+N+  
Sbjct: 18   KGAGLRTSNAHWLHSCIAVPKTT----GIDLSQANPAEGVMVPQSHLFPPPTRDSRND-- 71

Query: 981  GTXXXXXXXXXXXXXSNGVKPFKVKIPKKRADASMKKKRDSVSNAT--QKRSLDVVIDGT 808
                            + +K  K   P+K+  AS K K+      T  +K++LD+ ID +
Sbjct: 72   -----METVKQKSVNQSPLKSLKPNPPRKKRSASNKSKKTLSIPETKREKKNLDINIDIS 126

Query: 807  TIDFSQVPAPVCSCTGVYRQCYRWGAGGWQSSCCTTSISEYPLPLSSSRPGARLAGRKMS 628
            + D S VP PVCSCTGV R CY+WG GGWQSSCCT SIS YPLP+S++RP  RLAGRKMS
Sbjct: 127  SFDTSGVPPPVCSCTGVSRVCYKWGMGGWQSSCCTISISTYPLPMSTTRPRVRLAGRKMS 186

Query: 627  NGAYAKLLQRLAAEGYVFSDAVDLKDHWAKHGTNKFVTIK 508
            NGAY KLL RLA EGY  S  VDLK+HWA+HGTNKFVTIK
Sbjct: 187  NGAYVKLLARLAGEGYNLSHPVDLKNHWARHGTNKFVTIK 226


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