BLASTX nr result

ID: Coptis23_contig00005636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005636
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25377.3| unnamed protein product [Vitis vinifera]               96   2e-18
ref|XP_003633182.1| PREDICTED: N(2),N(2)-dimethylguanosine tRNA ...    96   2e-18
ref|XP_002274607.1| PREDICTED: N(2),N(2)-dimethylguanosine tRNA ...    96   2e-18
ref|XP_003631506.1| PREDICTED: uncharacterized protein LOC100855...    95   5e-18
ref|XP_003566379.1| PREDICTED: N(2),N(2)-dimethylguanosine tRNA ...    95   5e-18

>emb|CBI25377.3| unnamed protein product [Vitis vinifera]
          Length = 338

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/60 (76%), Positives = 53/60 (88%)
 Frame = -3

Query: 225 YIKLDQVAKRAKINSPPLGVMITSLIKEGYAATRSHIASNAIKTNCPMTRCIKIARELQQ 46
           YIKLD+VA RAKINSPPL  M+++L KEGYA +RSHIASNAIKTNCPM  CI+IA+ELQQ
Sbjct: 278 YIKLDEVASRAKINSPPLRTMMSALNKEGYAVSRSHIASNAIKTNCPMAVCIRIAKELQQ 337


>ref|XP_003633182.1| PREDICTED: N(2),N(2)-dimethylguanosine tRNA methyltransferase-like
           [Vitis vinifera] gi|296090467|emb|CBI40663.3| unnamed
           protein product [Vitis vinifera]
          Length = 98

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/60 (76%), Positives = 53/60 (88%)
 Frame = -3

Query: 225 YIKLDQVAKRAKINSPPLGVMITSLIKEGYAATRSHIASNAIKTNCPMTRCIKIARELQQ 46
           YIKLD+VA RAKINSPPL  M+++L KEGYA +RSHIASNAIKTNCPM  CI+IA+ELQQ
Sbjct: 38  YIKLDEVASRAKINSPPLRTMMSALNKEGYAVSRSHIASNAIKTNCPMAVCIRIAKELQQ 97


>ref|XP_002274607.1| PREDICTED: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
           [Vitis vinifera] gi|147780177|emb|CAN75521.1|
           hypothetical protein VITISV_043594 [Vitis vinifera]
          Length = 424

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/60 (76%), Positives = 53/60 (88%)
 Frame = -3

Query: 225 YIKLDQVAKRAKINSPPLGVMITSLIKEGYAATRSHIASNAIKTNCPMTRCIKIARELQQ 46
           YIKLD+VA RAKINSPPL  M+++L KEGYA +RSHIASNAIKTNCPM  CI+IA+ELQQ
Sbjct: 364 YIKLDEVASRAKINSPPLRTMMSALNKEGYAVSRSHIASNAIKTNCPMAVCIRIAKELQQ 423


>ref|XP_003631506.1| PREDICTED: uncharacterized protein LOC100855177 [Vitis vinifera]
          Length = 237

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 45/60 (75%), Positives = 53/60 (88%)
 Frame = -3

Query: 225 YIKLDQVAKRAKINSPPLGVMITSLIKEGYAATRSHIASNAIKTNCPMTRCIKIARELQQ 46
           YIKLD+VA+ AKINSPPL  M+++L KEGYA +RSHIASNAIKTNCPM  CI+IA+ELQQ
Sbjct: 177 YIKLDEVARHAKINSPPLRTMMSALNKEGYAVSRSHIASNAIKTNCPMAVCIRIAKELQQ 236


>ref|XP_003566379.1| PREDICTED: N(2),N(2)-dimethylguanosine tRNA methyltransferase
           Trm1-like [Brachypodium distachyon]
          Length = 444

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 42/61 (68%), Positives = 53/61 (86%)
 Frame = -3

Query: 225 YIKLDQVAKRAKINSPPLGVMITSLIKEGYAATRSHIASNAIKTNCPMTRCIKIARELQQ 46
           YI+LD++A RAK+NSPPLG +I SL KEGYAA RSHI +NAIKTNCP+T CI++ARE++ 
Sbjct: 383 YIRLDEIASRAKVNSPPLGTLINSLQKEGYAACRSHIGANAIKTNCPITSCIEVAREIRN 442

Query: 45  L 43
           L
Sbjct: 443 L 443


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