BLASTX nr result

ID: Coptis23_contig00005624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005624
         (939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307264.1| predicted protein [Populus trichocarpa] gi|2...   147   3e-33
ref|XP_002310141.1| predicted protein [Populus trichocarpa] gi|2...   143   7e-32
ref|XP_002523579.1| conserved hypothetical protein [Ricinus comm...   137   4e-30
ref|XP_004141915.1| PREDICTED: uncharacterized protein LOC101216...   134   4e-29
ref|XP_002282456.1| PREDICTED: uncharacterized protein LOC100250...   129   1e-27

>ref|XP_002307264.1| predicted protein [Populus trichocarpa] gi|222856713|gb|EEE94260.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score =  147 bits (372), Expect = 3e-33
 Identities = 77/143 (53%), Positives = 88/143 (61%)
 Frame = +1

Query: 106 PLYKQHSLSSDTYRDETWLXXXXXXXXXXXXXVTDDDLDELKACMELGFGFDSPDLDRKL 285
           PLYKQHS S D YRDE WL             VTD+DLDELK C+ELGFGFDSP++D++L
Sbjct: 36  PLYKQHSWSPDIYRDEAWLRRKGNYKKKKCKSVTDEDLDELKGCIELGFGFDSPEMDQRL 95

Query: 286 SDTFPALEFYFAVNKQYNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSPNTIFDTGNN 465
           SDTFPALE Y+AVNK Y++                            L SP+ IF  G+N
Sbjct: 96  SDTFPALELYYAVNKNYHDHSVSKPFTDTSSSSMASDCDSLSP----LGSPHNIFGPGDN 151

Query: 466 PQLVKARLKQWAQVVACSVRHSS 534
           PQ VK RLKQWAQVVACSVR SS
Sbjct: 152 PQTVKTRLKQWAQVVACSVRQSS 174


>ref|XP_002310141.1| predicted protein [Populus trichocarpa] gi|222853044|gb|EEE90591.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  143 bits (360), Expect = 7e-32
 Identities = 76/143 (53%), Positives = 86/143 (60%)
 Frame = +1

Query: 106 PLYKQHSLSSDTYRDETWLXXXXXXXXXXXXXVTDDDLDELKACMELGFGFDSPDLDRKL 285
           PLYKQHS S D  RDE WL             VTD+DLDELK C+ELGFGFDSP++D++L
Sbjct: 41  PLYKQHSWSPDIDRDEAWLRRKGSYKKKKSKSVTDEDLDELKGCIELGFGFDSPEMDQRL 100

Query: 286 SDTFPALEFYFAVNKQYNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSPNTIFDTGNN 465
           SDTFPALE Y+AVNK Y +                            L SP+TIF  G N
Sbjct: 101 SDTFPALELYYAVNKNYYDHSASKPVVTATPSSSTASDCDSPSP---LGSPHTIFGPGEN 157

Query: 466 PQLVKARLKQWAQVVACSVRHSS 534
           PQ VK RL+QWAQVVACSVR SS
Sbjct: 158 PQTVKTRLRQWAQVVACSVRQSS 180


>ref|XP_002523579.1| conserved hypothetical protein [Ricinus communis]
           gi|223537141|gb|EEF38774.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 300

 Score =  137 bits (345), Expect = 4e-30
 Identities = 73/143 (51%), Positives = 84/143 (58%)
 Frame = +1

Query: 106 PLYKQHSLSSDTYRDETWLXXXXXXXXXXXXXVTDDDLDELKACMELGFGFDSPDLDRKL 285
           PLYKQHS S D YRDE WL             VTD+D+DELKAC+ELGFGFDSP++D++L
Sbjct: 158 PLYKQHSWSPDIYRDEAWLRRKGNSKKKKSKSVTDEDVDELKACIELGFGFDSPEMDQRL 217

Query: 286 SDTFPALEFYFAVNKQYNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSPNTIFDTGNN 465
           SDT PAL  Y AVNK Y +                            L SP+ IF  G+N
Sbjct: 218 SDTLPALGLYHAVNKHYYDHTFSKPVMAASSSSTASDCDSPSP----LGSPHAIFGPGDN 273

Query: 466 PQLVKARLKQWAQVVACSVRHSS 534
           PQ VK RL+QWAQVVACSVR  S
Sbjct: 274 PQTVKTRLRQWAQVVACSVRQCS 296


>ref|XP_004141915.1| PREDICTED: uncharacterized protein LOC101216565 [Cucumis sativus]
           gi|449512907|ref|XP_004164175.1| PREDICTED:
           uncharacterized LOC101216565 [Cucumis sativus]
          Length = 154

 Score =  134 bits (336), Expect = 4e-29
 Identities = 72/140 (51%), Positives = 81/140 (57%)
 Frame = +1

Query: 106 PLYKQHSLSSDTYRDETWLXXXXXXXXXXXXXVTDDDLDELKACMELGFGFDSPDLDRKL 285
           PLYKQHS S D  RD+ WL             VTDDDL+ELKAC+ELGFGF+SP++D +L
Sbjct: 19  PLYKQHSWSPDADRDQAWLRRKTQSKMRRSKSVTDDDLEELKACLELGFGFNSPEVDPRL 78

Query: 286 SDTFPALEFYFAVNKQYNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSPNTIFDTGNN 465
            +TFPAL FY AVNKQYN                               SP  I   G N
Sbjct: 79  CETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSESVSPSAD------SSPAAIISHGEN 132

Query: 466 PQLVKARLKQWAQVVACSVR 525
           PQ+VKARLKQWAQVVACSVR
Sbjct: 133 PQMVKARLKQWAQVVACSVR 152


>ref|XP_002282456.1| PREDICTED: uncharacterized protein LOC100250717 [Vitis vinifera]
          Length = 157

 Score =  129 bits (323), Expect = 1e-27
 Identities = 76/149 (51%), Positives = 84/149 (56%), Gaps = 6/149 (4%)
 Frame = +1

Query: 106 PLYKQHSLSSD---TYRDETWLXXXXXXXXXXXXX---VTDDDLDELKACMELGFGFDSP 267
           PLYKQ S S D   TYRDE W                 VTD+DLDELKAC+ELGFGFDSP
Sbjct: 15  PLYKQRSWSPDSPDTYRDEAWQRRKGNNTRRSRRRSKSVTDEDLDELKACIELGFGFDSP 74

Query: 268 DLDRKLSDTFPALEFYFAVNKQYNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSPNTI 447
           D+D++LSDT PAL  Y AVNKQY                              L SP+TI
Sbjct: 75  DMDQRLSDTLPALGLYKAVNKQY-------FDTVAKSLSPSSSTMSECDPPSPLGSPHTI 127

Query: 448 FDTGNNPQLVKARLKQWAQVVACSVRHSS 534
           F  G+NPQ VK RL+ WAQVVACSVR SS
Sbjct: 128 FGPGDNPQTVKTRLRHWAQVVACSVRQSS 156


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