BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005613
         (1173 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268441.2| PREDICTED: F-box protein SKP2B-like [Vitis v...   488   e-135
emb|CBI19930.3| unnamed protein product [Vitis vinifera]              488   e-135
ref|XP_002520258.1| F-box/LRR-repeat protein, putative [Ricinus ...   476   e-132
ref|XP_002306672.1| predicted protein [Populus trichocarpa] gi|2...   474   e-131
ref|XP_002302202.1| predicted protein [Populus trichocarpa] gi|2...   465   e-128

>ref|XP_002268441.2| PREDICTED: F-box protein SKP2B-like [Vitis vinifera]
          Length = 370

 Score =  488 bits (1256), Expect = e-135
 Identities = 230/295 (77%), Positives = 262/295 (88%)
 Frame = +2

Query: 2   CTGWRDAVCLGLTHLCLSWCKNSMNNLLLSLAPKFTKLQVLSLRQVKAQLQDDAIEAVAN 181
           C+GWRDA+CLGLTHL LSWCKN+MNNL+LSLAPKFTKLQ L+LRQ K QL+D A+E +AN
Sbjct: 66  CSGWRDAICLGLTHLSLSWCKNNMNNLVLSLAPKFTKLQALTLRQDKPQLEDKAVEIIAN 125

Query: 182 FCHDLQDLDLSLSNKLTDQSLYSLAHGCPHLTKLNISGCTAFGDAALAYLTSFCRKLKIL 361
           +CHDLQDLDLS S KL+D SLY+LAHGCP+LTKLNISGCTAF DAALA+LTSFCR+LKIL
Sbjct: 126 YCHDLQDLDLSKSFKLSDSSLYALAHGCPNLTKLNISGCTAFSDAALAHLTSFCRRLKIL 185

Query: 362 NLCGCVPAATDRALKAIAYNCSLLETLNLGWCEAVSDVGVTSLAFGCPNLEALDLCGCVL 541
           NLCGC  AA++RAL+AI  NCS L++LNLGWCE VSD GV SLA+GCP+L ALDLCGCV 
Sbjct: 186 NLCGCGKAASNRALQAIGRNCSQLQSLNLGWCEDVSDAGVMSLAYGCPDLRALDLCGCVH 245

Query: 542 ITDDSVVALATRCMHLRSLGLYYCKNITDKAMYSLANSRVKSKRDLWESVKKSRYEEGLV 721
           ITD+SV+ALA RC+HLRSLGLY+C+NITDKAMYSLA SRVK+K ++WES+K    EEGL+
Sbjct: 246 ITDESVIALANRCLHLRSLGLYFCQNITDKAMYSLAQSRVKNKHEMWESMKSRYSEEGLM 305

Query: 722 KLNISQCTSLTPSAVQAVCDSFPDLHTCPGRHSLIISGCLHLTSVHCACTFQAHR 886
            LNISQCT+LTP AVQAVCDSFP LHTCPGRHSLIISGCL LTSVHCAC  QAHR
Sbjct: 306 NLNISQCTALTPPAVQAVCDSFPALHTCPGRHSLIISGCLSLTSVHCACGVQAHR 360


>emb|CBI19930.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score =  488 bits (1256), Expect = e-135
 Identities = 230/295 (77%), Positives = 262/295 (88%)
 Frame = +2

Query: 2    CTGWRDAVCLGLTHLCLSWCKNSMNNLLLSLAPKFTKLQVLSLRQVKAQLQDDAIEAVAN 181
            C+GWRDA+CLGLTHL LSWCKN+MNNL+LSLAPKFTKLQ L+LRQ K QL+D A+E +AN
Sbjct: 124  CSGWRDAICLGLTHLSLSWCKNNMNNLVLSLAPKFTKLQALTLRQDKPQLEDKAVEIIAN 183

Query: 182  FCHDLQDLDLSLSNKLTDQSLYSLAHGCPHLTKLNISGCTAFGDAALAYLTSFCRKLKIL 361
            +CHDLQDLDLS S KL+D SLY+LAHGCP+LTKLNISGCTAF DAALA+LTSFCR+LKIL
Sbjct: 184  YCHDLQDLDLSKSFKLSDSSLYALAHGCPNLTKLNISGCTAFSDAALAHLTSFCRRLKIL 243

Query: 362  NLCGCVPAATDRALKAIAYNCSLLETLNLGWCEAVSDVGVTSLAFGCPNLEALDLCGCVL 541
            NLCGC  AA++RAL+AI  NCS L++LNLGWCE VSD GV SLA+GCP+L ALDLCGCV 
Sbjct: 244  NLCGCGKAASNRALQAIGRNCSQLQSLNLGWCEDVSDAGVMSLAYGCPDLRALDLCGCVH 303

Query: 542  ITDDSVVALATRCMHLRSLGLYYCKNITDKAMYSLANSRVKSKRDLWESVKKSRYEEGLV 721
            ITD+SV+ALA RC+HLRSLGLY+C+NITDKAMYSLA SRVK+K ++WES+K    EEGL+
Sbjct: 304  ITDESVIALANRCLHLRSLGLYFCQNITDKAMYSLAQSRVKNKHEMWESMKSRYSEEGLM 363

Query: 722  KLNISQCTSLTPSAVQAVCDSFPDLHTCPGRHSLIISGCLHLTSVHCACTFQAHR 886
             LNISQCT+LTP AVQAVCDSFP LHTCPGRHSLIISGCL LTSVHCAC  QAHR
Sbjct: 364  NLNISQCTALTPPAVQAVCDSFPALHTCPGRHSLIISGCLSLTSVHCACGVQAHR 418


>ref|XP_002520258.1| F-box/LRR-repeat protein, putative [Ricinus communis]
           gi|223540477|gb|EEF42044.1| F-box/LRR-repeat protein,
           putative [Ricinus communis]
          Length = 373

 Score =  476 bits (1224), Expect = e-132
 Identities = 224/295 (75%), Positives = 254/295 (86%)
 Frame = +2

Query: 2   CTGWRDAVCLGLTHLCLSWCKNSMNNLLLSLAPKFTKLQVLSLRQVKAQLQDDAIEAVAN 181
           C+GWRDA+CLGLTHLCLSWCKN MNNL+L LAPKFTKL+ L LRQ K QL+D+A+EA+A 
Sbjct: 69  CSGWRDAICLGLTHLCLSWCKNHMNNLVLWLAPKFTKLETLVLRQDKPQLEDNAVEAIAR 128

Query: 182 FCHDLQDLDLSLSNKLTDQSLYSLAHGCPHLTKLNISGCTAFGDAALAYLTSFCRKLKIL 361
           +CHDL+DLDLS S KLTD SLY+LAHGCP+LTKLNISGCT+F D  L YLT FCRKLKIL
Sbjct: 129 YCHDLEDLDLSKSFKLTDCSLYALAHGCPNLTKLNISGCTSFSDGGLEYLTGFCRKLKIL 188

Query: 362 NLCGCVPAATDRALKAIAYNCSLLETLNLGWCEAVSDVGVTSLAFGCPNLEALDLCGCVL 541
           NLCGCV AATDRAL+AI  NCS L++LNLGWCE V DVGV SLA+GCP+L  LDLCGCV 
Sbjct: 189 NLCGCVKAATDRALQAIGRNCSQLQSLNLGWCENVGDVGVMSLAYGCPDLRTLDLCGCVN 248

Query: 542 ITDDSVVALATRCMHLRSLGLYYCKNITDKAMYSLANSRVKSKRDLWESVKKSRYEEGLV 721
           ITDDSV+ALA RC+HLRSLGLYYC+NITD+AMYSL +SRVK+K  +WESVK    EEGL 
Sbjct: 249 ITDDSVIALAYRCLHLRSLGLYYCRNITDRAMYSLVHSRVKNKPAMWESVKGRCDEEGLR 308

Query: 722 KLNISQCTSLTPSAVQAVCDSFPDLHTCPGRHSLIISGCLHLTSVHCACTFQAHR 886
            LNISQCT+LTP AVQA+CD FP LHTC GRHSL++SGCL+LTSVHCAC  QAHR
Sbjct: 309 SLNISQCTALTPPAVQALCDCFPALHTCSGRHSLVMSGCLNLTSVHCACAVQAHR 363


>ref|XP_002306672.1| predicted protein [Populus trichocarpa] gi|222856121|gb|EEE93668.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  474 bits (1219), Expect = e-131
 Identities = 220/296 (74%), Positives = 253/296 (85%)
 Frame = +2

Query: 2   CTGWRDAVCLGLTHLCLSWCKNSMNNLLLSLAPKFTKLQVLSLRQVKAQLQDDAIEAVAN 181
           C+GWRDA+C+GLTHLCLSWCKN+MNNL+LSLAPKFTKLQ L LRQ K QL+D A+E +A+
Sbjct: 59  CSGWRDAICMGLTHLCLSWCKNNMNNLVLSLAPKFTKLQTLVLRQDKPQLEDHAVETIAS 118

Query: 182 FCHDLQDLDLSLSNKLTDQSLYSLAHGCPHLTKLNISGCTAFGDAALAYLTSFCRKLKIL 361
           +CHDLQDLDLS S KL+D SLY+LAHGCP+LTKLNISGCTAF D  L YLT FC+KLK L
Sbjct: 119 YCHDLQDLDLSKSFKLSDLSLYALAHGCPNLTKLNISGCTAFSDDGLEYLTEFCQKLKFL 178

Query: 362 NLCGCVPAATDRALKAIAYNCSLLETLNLGWCEAVSDVGVTSLAFGCPNLEALDLCGCVL 541
           NLCGCV  ATDRAL+ I  NCS L+TLNLGWCE V DVGV SLA+GCP+L  LDLCGCV 
Sbjct: 179 NLCGCVKGATDRALQGIGRNCSQLQTLNLGWCENVGDVGVMSLAYGCPDLRTLDLCGCVC 238

Query: 542 ITDDSVVALATRCMHLRSLGLYYCKNITDKAMYSLANSRVKSKRDLWESVKKSRYEEGLV 721
           ITDDSV+ALA RC HLRSLGLYYC+NITD+AMYSL ++RVK+K  +WES+K    EEGL 
Sbjct: 239 ITDDSVIALANRCPHLRSLGLYYCRNITDRAMYSLVHNRVKNKLSMWESMKGRCDEEGLS 298

Query: 722 KLNISQCTSLTPSAVQAVCDSFPDLHTCPGRHSLIISGCLHLTSVHCACTFQAHRA 889
           +LNISQCT+LTP AVQA+CDSFP LHTC GRHSL++SGCL+LTSVHC C  QAHR+
Sbjct: 299 RLNISQCTALTPPAVQALCDSFPALHTCSGRHSLVMSGCLNLTSVHCVCAVQAHRS 354


>ref|XP_002302202.1| predicted protein [Populus trichocarpa] gi|222843928|gb|EEE81475.1|
           predicted protein [Populus trichocarpa]
          Length = 358

 Score =  465 bits (1196), Expect = e-128
 Identities = 218/294 (74%), Positives = 252/294 (85%)
 Frame = +2

Query: 2   CTGWRDAVCLGLTHLCLSWCKNSMNNLLLSLAPKFTKLQVLSLRQVKAQLQDDAIEAVAN 181
           C+GWRDA+C GLTHLCLSWCKN+MNNL+LSLAPKFTKLQ L LRQ K QL+D+A+E +A+
Sbjct: 54  CSGWRDAICSGLTHLCLSWCKNNMNNLVLSLAPKFTKLQTLVLRQDKPQLEDNAVETIAS 113

Query: 182 FCHDLQDLDLSLSNKLTDQSLYSLAHGCPHLTKLNISGCTAFGDAALAYLTSFCRKLKIL 361
           +CHDLQDLDLS S KL+D SLY+LAHG P+LTKLNISGCTAF D +L YLT FCRKLKIL
Sbjct: 114 YCHDLQDLDLSKSFKLSDLSLYALAHGFPNLTKLNISGCTAFSDVSLEYLTEFCRKLKIL 173

Query: 362 NLCGCVPAATDRALKAIAYNCSLLETLNLGWCEAVSDVGVTSLAFGCPNLEALDLCGCVL 541
           NLCGCV  ATDRAL+AI  NCS L++LNLGWCE VSDVGV SLA+GCP++  LDLCGCV 
Sbjct: 174 NLCGCVNGATDRALQAIGRNCSQLQSLNLGWCENVSDVGVMSLAYGCPDIRTLDLCGCVC 233

Query: 542 ITDDSVVALATRCMHLRSLGLYYCKNITDKAMYSLANSRVKSKRDLWESVKKSRYEEGLV 721
           ITDDSV+ALA RC HLRSL LYYC+NITD+AMYSL ++RVK+K  +WES+K    EEGL 
Sbjct: 234 ITDDSVIALANRCPHLRSLCLYYCRNITDRAMYSLVHNRVKNKPAMWESMKGRYDEEGLK 293

Query: 722 KLNISQCTSLTPSAVQAVCDSFPDLHTCPGRHSLIISGCLHLTSVHCACTFQAH 883
            LNISQCT++TP AVQA+CDSFP LHTC GRHSL++SGC +LTSVHCAC  QAH
Sbjct: 294 SLNISQCTAITPPAVQALCDSFPALHTCSGRHSLVMSGCWNLTSVHCACAVQAH 347