BLASTX nr result

ID: Coptis23_contig00005604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005604
         (1311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310568.1| predicted protein [Populus trichocarpa] gi|2...   359   1e-96
ref|XP_002307092.1| predicted protein [Populus trichocarpa] gi|2...   354   3e-95
ref|XP_002866887.1| hypothetical protein ARALYDRAFT_490769 [Arab...   352   9e-95
ref|NP_195694.1| uncharacterized protein [Arabidopsis thaliana] ...   350   5e-94
ref|XP_002533203.1| conserved hypothetical protein [Ricinus comm...   347   3e-93

>ref|XP_002310568.1| predicted protein [Populus trichocarpa] gi|222853471|gb|EEE91018.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score =  359 bits (921), Expect = 1e-96
 Identities = 170/240 (70%), Positives = 204/240 (85%)
 Frame = -2

Query: 887 NWMEIEDDDDLVSEFRDLPSKFQQTLLPDLERISLTSKAYINQANKEISEGFRPLVGKQY 708
           +W++ +D+DDLV+EFRDLPSKF QT+LPDLER+S+TSK Y+ QANK++++GF+P+VG +Y
Sbjct: 211 SWLDQDDEDDLVAEFRDLPSKFHQTILPDLERLSITSKKYLTQANKDLTKGFKPIVGSKY 270

Query: 707 APTIASIVSCVFMFLPLLLVSLIFNRIKAYFSLQKILIFVQVYLSIYFSILSFASIVTGL 528
           A TIAS VS  F+ +PLLLVSL+FNRIKAYFS+QKILIF+QVYLSIYF+IL  +++VTGL
Sbjct: 271 ASTIASTVSFAFILIPLLLVSLVFNRIKAYFSIQKILIFIQVYLSIYFTILCLSALVTGL 330

Query: 527 EPLKFFYASSQSSYICLQVFQTLAXXXXXXXXXXXXXXXFSTETGLGLKVLGLGQTFVGF 348
           EPLKFFYA+SQS+Y+CL VFQTL                FS E G+G K+LGLGQT VGF
Sbjct: 331 EPLKFFYATSQSNYVCLMVFQTLGYVLYLLLLLMYLILVFSAECGMGSKLLGLGQTLVGF 390

Query: 347 AVGLHYYVTVFHRAVLHQPPRTNWKIHGIYATCFLVICLLANAERRKKAYLEDGGEEGKK 168
           A+GLHYYV VFHR VLHQPP+TNWKIHGIYATCFLVICL ANAERRKKAYLE+GGEEGKK
Sbjct: 391 AIGLHYYVAVFHRVVLHQPPKTNWKIHGIYATCFLVICLFANAERRKKAYLEEGGEEGKK 450


>ref|XP_002307092.1| predicted protein [Populus trichocarpa] gi|222856541|gb|EEE94088.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score =  354 bits (908), Expect = 3e-95
 Identities = 171/240 (71%), Positives = 199/240 (82%)
 Frame = -2

Query: 887 NWMEIEDDDDLVSEFRDLPSKFQQTLLPDLERISLTSKAYINQANKEISEGFRPLVGKQY 708
           +W+   D+DDLV+EFRDLPSKF QTL+PDLERIS+TSK Y+ +AN +++ GF+P+VG +Y
Sbjct: 173 SWIGQHDEDDLVAEFRDLPSKFHQTLIPDLERISITSKKYLTKANNDLTRGFKPIVGNKY 232

Query: 707 APTIASIVSCVFMFLPLLLVSLIFNRIKAYFSLQKILIFVQVYLSIYFSILSFASIVTGL 528
           APTIASIVS  F+ +PLLLVSLIFN IKAYFS+QKILIF+QVYLSIYF+IL  +S+VTGL
Sbjct: 233 APTIASIVSFAFILIPLLLVSLIFNHIKAYFSIQKILIFIQVYLSIYFTILCLSSLVTGL 292

Query: 527 EPLKFFYASSQSSYICLQVFQTLAXXXXXXXXXXXXXXXFSTETGLGLKVLGLGQTFVGF 348
           EPLKFFYA+SQS+Y+CL V QTL                FSTE GL  K LGLGQT VG+
Sbjct: 293 EPLKFFYATSQSTYVCLMVLQTLGYALYLLLLLMYLILVFSTECGLSSKFLGLGQTLVGY 352

Query: 347 AVGLHYYVTVFHRAVLHQPPRTNWKIHGIYATCFLVICLLANAERRKKAYLEDGGEEGKK 168
           AVGLHYYV VFHR VLHQPP+TNWK+HGIYATCFLVICL ANAERRKKAYLE+GGEEGKK
Sbjct: 353 AVGLHYYVAVFHRVVLHQPPKTNWKVHGIYATCFLVICLFANAERRKKAYLEEGGEEGKK 412


>ref|XP_002866887.1| hypothetical protein ARALYDRAFT_490769 [Arabidopsis lyrata subsp.
           lyrata] gi|297312723|gb|EFH43146.1| hypothetical protein
           ARALYDRAFT_490769 [Arabidopsis lyrata subsp. lyrata]
          Length = 449

 Score =  352 bits (904), Expect = 9e-95
 Identities = 169/239 (70%), Positives = 201/239 (84%)
 Frame = -2

Query: 884 WMEIEDDDDLVSEFRDLPSKFQQTLLPDLERISLTSKAYINQANKEISEGFRPLVGKQYA 705
           W++ E+D+D VSEFRDLP+KFQ++L+PDLERIS TSK YIN+ANKEI++ F+P  G +YA
Sbjct: 210 WLDDEEDEDFVSEFRDLPTKFQRSLIPDLERISTTSKNYINKANKEITKNFKPYFGNKYA 269

Query: 704 PTIASIVSCVFMFLPLLLVSLIFNRIKAYFSLQKILIFVQVYLSIYFSILSFASIVTGLE 525
           PTIAS+VS VF+ +PLLLVSLIFNR KAYFSLQKILIF+Q+YLSIYFSIL  +S+VTG+E
Sbjct: 270 PTIASVVSFVFILVPLLLVSLIFNRFKAYFSLQKILIFIQIYLSIYFSILCLSSLVTGIE 329

Query: 524 PLKFFYASSQSSYICLQVFQTLAXXXXXXXXXXXXXXXFSTETGLGLKVLGLGQTFVGFA 345
           PLKF YA+S S+Y+CLQ+ QTL                FST+ GLGLKVLGL QTFVGFA
Sbjct: 330 PLKFLYATSSSTYVCLQILQTLGYVFYLLLLLMYLVLVFSTDCGLGLKVLGLAQTFVGFA 389

Query: 344 VGLHYYVTVFHRAVLHQPPRTNWKIHGIYATCFLVICLLANAERRKKAYLEDGGEEGKK 168
           VGLHYYV VFHR VL QPP+TNWKIHG+YATCFL+ICLL+NAERRKK YLE+GG+EGKK
Sbjct: 390 VGLHYYVAVFHRVVLRQPPKTNWKIHGVYATCFLLICLLSNAERRKKEYLEEGGDEGKK 448


>ref|NP_195694.1| uncharacterized protein [Arabidopsis thaliana]
           gi|4490735|emb|CAB38897.1| putative protein [Arabidopsis
           thaliana] gi|7271039|emb|CAB80647.1| putative protein
           [Arabidopsis thaliana] gi|18175809|gb|AAL59931.1|
           unknown protein [Arabidopsis thaliana]
           gi|22136848|gb|AAM91768.1| unknown protein [Arabidopsis
           thaliana] gi|332661725|gb|AEE87125.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 451

 Score =  350 bits (898), Expect = 5e-94
 Identities = 167/239 (69%), Positives = 201/239 (84%)
 Frame = -2

Query: 884 WMEIEDDDDLVSEFRDLPSKFQQTLLPDLERISLTSKAYINQANKEISEGFRPLVGKQYA 705
           W++ E+D+D VSEFRDLP++FQ++L+PDLERIS TSK YIN+ANK+I++ F+P  G +YA
Sbjct: 212 WLDDEEDEDFVSEFRDLPTRFQRSLIPDLERISTTSKNYINKANKQITKNFKPYFGNKYA 271

Query: 704 PTIASIVSCVFMFLPLLLVSLIFNRIKAYFSLQKILIFVQVYLSIYFSILSFASIVTGLE 525
           PTIAS+VS VF+ +PLLLVSLIFNR KAYFSLQKILIF+Q+YLSIYFSIL  +S+VTG+E
Sbjct: 272 PTIASVVSFVFILVPLLLVSLIFNRFKAYFSLQKILIFIQIYLSIYFSILCLSSLVTGIE 331

Query: 524 PLKFFYASSQSSYICLQVFQTLAXXXXXXXXXXXXXXXFSTETGLGLKVLGLGQTFVGFA 345
           PLKF YA+S S+Y+CLQ+ QTL                FST+ GLGLKVLGL QTFVGFA
Sbjct: 332 PLKFLYATSSSTYVCLQILQTLGYVFYLLLLLMYLVLVFSTDCGLGLKVLGLAQTFVGFA 391

Query: 344 VGLHYYVTVFHRAVLHQPPRTNWKIHGIYATCFLVICLLANAERRKKAYLEDGGEEGKK 168
           VGLHYYV VFHR VL QPP+TNWKIHG+YATCFL+ICLL+NAERRKK YLE+GG+EGKK
Sbjct: 392 VGLHYYVAVFHRVVLRQPPKTNWKIHGVYATCFLLICLLSNAERRKKEYLEEGGDEGKK 450


>ref|XP_002533203.1| conserved hypothetical protein [Ricinus communis]
           gi|223526979|gb|EEF29174.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 458

 Score =  347 bits (891), Expect = 3e-93
 Identities = 165/240 (68%), Positives = 203/240 (84%)
 Frame = -2

Query: 887 NWMEIEDDDDLVSEFRDLPSKFQQTLLPDLERISLTSKAYINQANKEISEGFRPLVGKQY 708
           +W++ E +DDLV+EFRDLPSKFQQTLLPDLERIS+TSK Y+ +ANKE+++GF+P+VG +Y
Sbjct: 218 SWLDQEMEDDLVAEFRDLPSKFQQTLLPDLERISITSKKYLTKANKEMTKGFKPIVGNKY 277

Query: 707 APTIASIVSCVFMFLPLLLVSLIFNRIKAYFSLQKILIFVQVYLSIYFSILSFASIVTGL 528
           A   A++VS  F+ +PLLLVSL+FNRIKAYFS+QKI+IF+QVYLSIYFSIL  +S+VTGL
Sbjct: 278 ASATATVVSFAFITIPLLLVSLVFNRIKAYFSIQKIVIFIQVYLSIYFSILCLSSLVTGL 337

Query: 527 EPLKFFYASSQSSYICLQVFQTLAXXXXXXXXXXXXXXXFSTETGLGLKVLGLGQTFVGF 348
           EPL+FFYA+S+S+Y+CL V QTL                FSTE+GLG ++LGLGQ FVGF
Sbjct: 338 EPLRFFYATSESTYVCLMVLQTLGYVLYLLLLLMYLILVFSTESGLGSRLLGLGQIFVGF 397

Query: 347 AVGLHYYVTVFHRAVLHQPPRTNWKIHGIYATCFLVICLLANAERRKKAYLEDGGEEGKK 168
           A+GLH+YV+VFHR VLHQPP+TNWK+H IYATCFLVICLLA  +RRKKAYLEDGGEEGKK
Sbjct: 398 AIGLHFYVSVFHRVVLHQPPKTNWKVHAIYATCFLVICLLAKFDRRKKAYLEDGGEEGKK 457


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