BLASTX nr result

ID: Coptis23_contig00005594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005594
         (1531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324921.1| predicted protein [Populus trichocarpa] gi|2...   510   e-142
ref|XP_002309684.1| predicted protein [Populus trichocarpa] gi|2...   501   e-139
emb|CBI25262.3| unnamed protein product [Vitis vinifera]              498   e-138
ref|XP_002272239.1| PREDICTED: uncharacterized protein LOC100250...   498   e-138
ref|XP_002283372.1| PREDICTED: uncharacterized protein LOC100261...   493   e-137

>ref|XP_002324921.1| predicted protein [Populus trichocarpa] gi|222866355|gb|EEF03486.1|
            predicted protein [Populus trichocarpa]
          Length = 494

 Score =  510 bits (1313), Expect = e-142
 Identities = 252/363 (69%), Positives = 291/363 (80%)
 Frame = +3

Query: 3    LLISLHSKLHIVFALLSLTAGSAGVAIADVTIDACVAQNSISHPSLAADMQSLCGLSSSV 182
            LL+S H  LHI FALLSLTAGSAG AIADVTIDACVAQNS + PSLAADMQSLC LSSS+
Sbjct: 131  LLLSFHENLHIAFALLSLTAGSAGAAIADVTIDACVAQNSNTRPSLAADMQSLCALSSSI 190

Query: 183  GALVGFSISGFLVHLIGPKGVFGVLSIPFGLVFLIGMVLKEPKIPNFSYRQVNHKFLEAS 362
            GAL+GFS+SG  VHLIGPKGVFG+LSIP GLVFL+G++L EP +PNFSYRQVN KF++A 
Sbjct: 191  GALMGFSLSGIFVHLIGPKGVFGLLSIPAGLVFLVGILLDEPFMPNFSYRQVNQKFVDAG 250

Query: 363  KSMLTTLKCPEVWRPCVYMYLSLALSLNIHEGMFYWLTDPKAGPAFSQENXXXXXXXXXX 542
            K+M  TLK P+VWRPCVYMYLS+ALS++IHEG+FYW TD K GP+FSQE           
Sbjct: 251  KAMWRTLKFPDVWRPCVYMYLSIALSIDIHEGLFYWYTDSKGGPSFSQETVGFIFSIGSI 310

Query: 543  XXXXXXXXYQNVLKDYPFRSIVFWSQLLFGVSGMLDLILVLRLNLKFGMPDYVFVVIDEG 722
                    YQNVLKD+PFR+++FW QLLFG+SGMLDL+LVLRLNLKF +PDY F+VIDE 
Sbjct: 311  GSLLGALLYQNVLKDHPFRNLLFWIQLLFGLSGMLDLMLVLRLNLKFSIPDYFFIVIDES 370

Query: 723  VSQMIGRLKWMPLLVISSKLCPPGIEGTFFALLMSIDNVGILTSSWGGGFLMHILSINRT 902
            VSQMIGRLKWMPLLV+SSKLCPPGIEGTFFALLMSIDNVG+L+S WGGGF++H+L + RT
Sbjct: 371  VSQMIGRLKWMPLLVLSSKLCPPGIEGTFFALLMSIDNVGLLSSQWGGGFILHLLKVTRT 430

Query: 903  QFDNLWLAILIRNIMRXXXXXXXXXXXRSDPTSSILPTEMFNTKVSAETTGVEKIELVSL 1082
            +FDNLW+AIL RNI+R           R DP +SILPTE+   K  AE    E IELVSL
Sbjct: 431  RFDNLWIAILTRNILRVTPLCLLFLIPRGDPNASILPTEILGAKEEAEN---ENIELVSL 487

Query: 1083 VHS 1091
            V S
Sbjct: 488  VSS 490


>ref|XP_002309684.1| predicted protein [Populus trichocarpa] gi|222855660|gb|EEE93207.1|
            predicted protein [Populus trichocarpa]
          Length = 494

 Score =  501 bits (1290), Expect = e-139
 Identities = 248/363 (68%), Positives = 290/363 (79%)
 Frame = +3

Query: 3    LLISLHSKLHIVFALLSLTAGSAGVAIADVTIDACVAQNSISHPSLAADMQSLCGLSSSV 182
            LL+S H  LHIVFALLS+TAGS G AIADVTIDACV QNS   PSLAADMQSLC LSSS+
Sbjct: 131  LLLSFHENLHIVFALLSMTAGSTGAAIADVTIDACVVQNSNIRPSLAADMQSLCALSSSI 190

Query: 183  GALVGFSISGFLVHLIGPKGVFGVLSIPFGLVFLIGMVLKEPKIPNFSYRQVNHKFLEAS 362
            GAL+GFS+SG  VHLIGPKGVFG+LSIP+GLVFL+G++L EP +P+FSYRQ   K L+AS
Sbjct: 191  GALMGFSLSGIFVHLIGPKGVFGLLSIPYGLVFLVGILLDEPFMPDFSYRQ---KLLDAS 247

Query: 363  KSMLTTLKCPEVWRPCVYMYLSLALSLNIHEGMFYWLTDPKAGPAFSQENXXXXXXXXXX 542
            K+M  TLK P+VWRPCVYMYLSLALS+NIHEG+FYW TD K GP+FSQEN          
Sbjct: 248  KAMWRTLKFPDVWRPCVYMYLSLALSINIHEGLFYWYTDSKDGPSFSQENVGFIFSIGSI 307

Query: 543  XXXXXXXXYQNVLKDYPFRSIVFWSQLLFGVSGMLDLILVLRLNLKFGMPDYVFVVIDEG 722
                    YQNVLKD+PFR+++FW+QLLFG+SGMLDL+LVLRLNLKFG+PDY F+VIDE 
Sbjct: 308  GSLLGALLYQNVLKDHPFRNLLFWTQLLFGLSGMLDLMLVLRLNLKFGIPDYFFIVIDES 367

Query: 723  VSQMIGRLKWMPLLVISSKLCPPGIEGTFFALLMSIDNVGILTSSWGGGFLMHILSINRT 902
            VSQMI RLKWMPLLV+SSKLCPPGIEGTFFALLMSIDN+G+L+S WGGG ++H+L++ RT
Sbjct: 368  VSQMITRLKWMPLLVLSSKLCPPGIEGTFFALLMSIDNIGVLSSQWGGGVILHLLNVTRT 427

Query: 903  QFDNLWLAILIRNIMRXXXXXXXXXXXRSDPTSSILPTEMFNTKVSAETTGVEKIELVSL 1082
            +FDNLWLAILIRNI+R           R DP +S+L  ++   K  AET   E IELVSL
Sbjct: 428  RFDNLWLAILIRNILRITPLCLLFLIPRGDPNASVLSNDILGAKEEAETPENENIELVSL 487

Query: 1083 VHS 1091
            V S
Sbjct: 488  VSS 490


>emb|CBI25262.3| unnamed protein product [Vitis vinifera]
          Length = 405

 Score =  498 bits (1282), Expect = e-138
 Identities = 243/364 (66%), Positives = 287/364 (78%)
 Frame = +3

Query: 3    LLISLHSKLHIVFALLSLTAGSAGVAIADVTIDACVAQNSISHPSLAADMQSLCGLSSSV 182
            L ++LH K+H+V ALLSL  GSAGVAIADVTIDACVAQNSISHPSLA DMQSLCGLSSS+
Sbjct: 42   LSLALHKKMHLVLALLSLMTGSAGVAIADVTIDACVAQNSISHPSLAGDMQSLCGLSSSI 101

Query: 183  GALVGFSISGFLVHLIGPKGVFGVLSIPFGLVFLIGMVLKEPKIPNFSYRQVNHKFLEAS 362
            GALVG+S+SGFLVH +GPKGVFGVLS+P GLV L+GM L+EP + NFSYR+VN KFL+A 
Sbjct: 102  GALVGYSLSGFLVHFVGPKGVFGVLSVPAGLVILVGMFLREPHVHNFSYRRVNQKFLDAC 161

Query: 363  KSMLTTLKCPEVWRPCVYMYLSLALSLNIHEGMFYWLTDPKAGPAFSQENXXXXXXXXXX 542
            K+M TTLKC EVWRPC+YMYLSLA+SLN+ EGMFYW TD K GP+FS+E           
Sbjct: 162  KAMWTTLKCREVWRPCLYMYLSLAVSLNVREGMFYWYTDAKGGPSFSKEVVGSIFSVGAV 221

Query: 543  XXXXXXXXYQNVLKDYPFRSIVFWSQLLFGVSGMLDLILVLRLNLKFGMPDYVFVVIDEG 722
                    YQNVLK++PFR I+FW+QLL+G+SGMLDLILVLR+NLK G+ DY F VIDE 
Sbjct: 222  GSLLGVLLYQNVLKNHPFRDILFWTQLLYGLSGMLDLILVLRINLKLGISDYFFAVIDEA 281

Query: 723  VSQMIGRLKWMPLLVISSKLCPPGIEGTFFALLMSIDNVGILTSSWGGGFLMHILSINRT 902
            V+ MIGR+KWMPLLV+SSKLCPPGIEGTFFALLMSIDNVG+L+SSW GG L+H+L + RT
Sbjct: 282  VTHMIGRVKWMPLLVLSSKLCPPGIEGTFFALLMSIDNVGMLSSSWAGGLLLHVLEVTRT 341

Query: 903  QFDNLWLAILIRNIMRXXXXXXXXXXXRSDPTSSILPTEMFNTKVSAETTGVEKIELVSL 1082
            QFDNLWL+ILIR++ R           RSDP  SILPTEM  TK   +    + IE+  L
Sbjct: 342  QFDNLWLSILIRSMFRIIPLGLLFLVPRSDPNLSILPTEMLRTKKGDDIPESDNIEMAPL 401

Query: 1083 VHSS 1094
            V+ +
Sbjct: 402  VNGT 405


>ref|XP_002272239.1| PREDICTED: uncharacterized protein LOC100250152 [Vitis vinifera]
          Length = 496

 Score =  498 bits (1282), Expect = e-138
 Identities = 243/364 (66%), Positives = 287/364 (78%)
 Frame = +3

Query: 3    LLISLHSKLHIVFALLSLTAGSAGVAIADVTIDACVAQNSISHPSLAADMQSLCGLSSSV 182
            L ++LH K+H+V ALLSL  GSAGVAIADVTIDACVAQNSISHPSLA DMQSLCGLSSS+
Sbjct: 133  LSLALHKKMHLVLALLSLMTGSAGVAIADVTIDACVAQNSISHPSLAGDMQSLCGLSSSI 192

Query: 183  GALVGFSISGFLVHLIGPKGVFGVLSIPFGLVFLIGMVLKEPKIPNFSYRQVNHKFLEAS 362
            GALVG+S+SGFLVH +GPKGVFGVLS+P GLV L+GM L+EP + NFSYR+VN KFL+A 
Sbjct: 193  GALVGYSLSGFLVHFVGPKGVFGVLSVPAGLVILVGMFLREPHVHNFSYRRVNQKFLDAC 252

Query: 363  KSMLTTLKCPEVWRPCVYMYLSLALSLNIHEGMFYWLTDPKAGPAFSQENXXXXXXXXXX 542
            K+M TTLKC EVWRPC+YMYLSLA+SLN+ EGMFYW TD K GP+FS+E           
Sbjct: 253  KAMWTTLKCREVWRPCLYMYLSLAVSLNVREGMFYWYTDAKGGPSFSKEVVGSIFSVGAV 312

Query: 543  XXXXXXXXYQNVLKDYPFRSIVFWSQLLFGVSGMLDLILVLRLNLKFGMPDYVFVVIDEG 722
                    YQNVLK++PFR I+FW+QLL+G+SGMLDLILVLR+NLK G+ DY F VIDE 
Sbjct: 313  GSLLGVLLYQNVLKNHPFRDILFWTQLLYGLSGMLDLILVLRINLKLGISDYFFAVIDEA 372

Query: 723  VSQMIGRLKWMPLLVISSKLCPPGIEGTFFALLMSIDNVGILTSSWGGGFLMHILSINRT 902
            V+ MIGR+KWMPLLV+SSKLCPPGIEGTFFALLMSIDNVG+L+SSW GG L+H+L + RT
Sbjct: 373  VTHMIGRVKWMPLLVLSSKLCPPGIEGTFFALLMSIDNVGMLSSSWAGGLLLHVLEVTRT 432

Query: 903  QFDNLWLAILIRNIMRXXXXXXXXXXXRSDPTSSILPTEMFNTKVSAETTGVEKIELVSL 1082
            QFDNLWL+ILIR++ R           RSDP  SILPTEM  TK   +    + IE+  L
Sbjct: 433  QFDNLWLSILIRSMFRIIPLGLLFLVPRSDPNLSILPTEMLRTKKGDDIPESDNIEMAPL 492

Query: 1083 VHSS 1094
            V+ +
Sbjct: 493  VNGT 496


>ref|XP_002283372.1| PREDICTED: uncharacterized protein LOC100261254 [Vitis vinifera]
            gi|296082152|emb|CBI21157.3| unnamed protein product
            [Vitis vinifera]
          Length = 506

 Score =  493 bits (1270), Expect = e-137
 Identities = 250/372 (67%), Positives = 289/372 (77%), Gaps = 9/372 (2%)
 Frame = +3

Query: 3    LLISLHSKLHIVFALLSLTAGSAGVAIADVTIDACVAQNSISHPSLAADMQSLCGLSSSV 182
            L++S H  LH+V AL SLTAGSAGVAIADVTIDACVAQNS  HPSLAADMQSLC LSSSV
Sbjct: 131  LVLSFHKDLHLVLALFSLTAGSAGVAIADVTIDACVAQNSNLHPSLAADMQSLCALSSSV 190

Query: 183  GALVGFSISGFLVHLIGPKGVFGVLSIPFGLVFLIGMVLKEPKIPNFSYRQVNHKFLEAS 362
            GALVGFSISG  VHLIGP GVFG+L+IP  LV L+G+VL EP  PNF YRQVN K L+A 
Sbjct: 191  GALVGFSISGIFVHLIGPTGVFGLLTIPATLVLLVGIVLSEPHTPNFVYRQVNQKLLDAC 250

Query: 363  KSMLTTLKCPEVWRPCVYMYLSLALSLNIHEGMFYWLTDPKAGPAFSQENXXXXXXXXXX 542
            K+M TTLK P+VWRPC+YMYLSLALSLNIHEG+FYW TD K GP FSQE           
Sbjct: 251  KAMWTTLKYPDVWRPCLYMYLSLALSLNIHEGLFYWYTDSKEGPLFSQETVGYIFSIGSV 310

Query: 543  XXXXXXXXYQNVLKDYPFRSIVFWSQLLFGVSGMLDLILVLRLNLKFGMPDYVFVVIDEG 722
                    YQ  LKD+PFR ++FW+QLL+G+SGMLDLILVLRLNLK+G+PDY F+V+ EG
Sbjct: 311  GSLLGAILYQYTLKDHPFRDLLFWTQLLYGLSGMLDLILVLRLNLKYGIPDYFFIVVAEG 370

Query: 723  VSQMIGRLKWMPLLVISSKLCPPGIEGTFFALLMSIDNVGILTSSWGGGFLMHILSINRT 902
            VSQMIGRLKWMPLLV+SSKLCPPGIEGTFFALLMSIDN+GIL+SSWGGGFL+HIL + R 
Sbjct: 371  VSQMIGRLKWMPLLVLSSKLCPPGIEGTFFALLMSIDNLGILSSSWGGGFLLHILKVTRV 430

Query: 903  QFDNLWLAILIRNIMRXXXXXXXXXXXRSDPTSSILPTEMF-NTKVSAETTGVE------ 1061
            QFDNLW+AILIRNI+R           R+DP SSI+P+++  NTK +A  +  E      
Sbjct: 431  QFDNLWMAILIRNILRLSPLALLFLVPRTDPNSSIIPSQILQNTKQAAHASHPENENKNE 490

Query: 1062 --KIELVSLVHS 1091
               IEL+ LV++
Sbjct: 491  DGNIELLPLVNN 502


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