BLASTX nr result

ID: Coptis23_contig00005593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005593
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241341.1| uncharacterized protein LOC100818121 [Glycin...   158   9e-37
ref|XP_002516033.1| conserved hypothetical protein [Ricinus comm...   151   1e-34
ref|XP_002304204.1| predicted protein [Populus trichocarpa] gi|2...   150   2e-34
ref|XP_002284456.1| PREDICTED: uncharacterized protein LOC100261...   150   2e-34
ref|XP_004141769.1| PREDICTED: uncharacterized protein LOC101220...   142   7e-32

>ref|NP_001241341.1| uncharacterized protein LOC100818121 [Glycine max]
           gi|255635604|gb|ACU18152.1| unknown [Glycine max]
          Length = 309

 Score =  158 bits (400), Expect = 9e-37
 Identities = 75/113 (66%), Positives = 93/113 (82%)
 Frame = +1

Query: 1   IHVSSTPVNLIYSEITVATGALATYFQPRKSRRVVTVNIEGTKVPLYGAGSSFAVSDTKG 180
           IHV STP+NL++SEITVATG L  ++QPRKS R+V+VN+EGTKVPLYGAGS+  VS T  
Sbjct: 197 IHVHSTPINLVFSEITVATGELKKHYQPRKSHRIVSVNLEGTKVPLYGAGSTITVSQTGV 256

Query: 181 GVPLTLEFGIRTRGYVVGKLVKTRHRMHITCPILVDSTSNKPMNLKQNSCRYD 339
            VPLTL F IR+RG VVGKLVKTRHR  ITCP++++S+ +KP+  K+NSC YD
Sbjct: 257 EVPLTLNFEIRSRGNVVGKLVKTRHRKEITCPLVLNSSRSKPIKFKKNSCTYD 309


>ref|XP_002516033.1| conserved hypothetical protein [Ricinus communis]
           gi|223544938|gb|EEF46453.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 306

 Score =  151 bits (382), Expect = 1e-34
 Identities = 72/113 (63%), Positives = 91/113 (80%)
 Frame = +1

Query: 1   IHVSSTPVNLIYSEITVATGALATYFQPRKSRRVVTVNIEGTKVPLYGAGSSFAVSDTKG 180
           IHVSSTP+NLIYSEI VATG L  Y+QPRKSRR ++V ++G KVPLYGAGS   VS T  
Sbjct: 194 IHVSSTPINLIYSEIPVATGQLKKYYQPRKSRRTISVIVKGEKVPLYGAGSGLTVSQTGI 253

Query: 181 GVPLTLEFGIRTRGYVVGKLVKTRHRMHITCPILVDSTSNKPMNLKQNSCRYD 339
            VPLTL+F IR+RG VVGKLV+T+HR  I+CP+++DST +KP+  K+++C YD
Sbjct: 254 IVPLTLQFEIRSRGNVVGKLVRTKHRKFISCPVVLDSTKSKPIKFKKDTCTYD 306


>ref|XP_002304204.1| predicted protein [Populus trichocarpa] gi|222841636|gb|EEE79183.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score =  150 bits (380), Expect = 2e-34
 Identities = 70/113 (61%), Positives = 91/113 (80%)
 Frame = +1

Query: 1   IHVSSTPVNLIYSEITVATGALATYFQPRKSRRVVTVNIEGTKVPLYGAGSSFAVSDTKG 180
           IHVSSTP+NL+YSEI +ATG L  Y+QPRKSRR V++ +EG KVPLYGAGSS  V+ T  
Sbjct: 197 IHVSSTPINLVYSEIPIATGQLKKYYQPRKSRRTVSMFVEGNKVPLYGAGSSLTVAQTGI 256

Query: 181 GVPLTLEFGIRTRGYVVGKLVKTRHRMHITCPILVDSTSNKPMNLKQNSCRYD 339
            +PLTL+F I +RG VVGKLV+T+HR  I+CP+++DS+S KP+  K+N+C YD
Sbjct: 257 VIPLTLKFEILSRGNVVGKLVRTKHRRQISCPLVIDSSSPKPIKFKKNTCTYD 309


>ref|XP_002284456.1| PREDICTED: uncharacterized protein LOC100261724 [Vitis vinifera]
           gi|297743254|emb|CBI36121.3| unnamed protein product
           [Vitis vinifera]
          Length = 310

 Score =  150 bits (379), Expect = 2e-34
 Identities = 72/115 (62%), Positives = 91/115 (79%), Gaps = 2/115 (1%)
 Frame = +1

Query: 1   IHVSSTPVNLIYSEITVATGALATYFQPRKSRRVVTVNIEGTKVPLYGAGSSFAVSDTKG 180
           IHVSSTP+NL+YSEI VATG L  Y+QPRKSRR V+V +EGTKVPLYGAGSS AVS+   
Sbjct: 196 IHVSSTPINLVYSEIVVATGQLKKYYQPRKSRRTVSVILEGTKVPLYGAGSSLAVSNNNN 255

Query: 181 GV--PLTLEFGIRTRGYVVGKLVKTRHRMHITCPILVDSTSNKPMNLKQNSCRYD 339
            V  P TLEF I++RG VVGKLV+T+H+  ++CP+++DS   KP+  K+N+C YD
Sbjct: 256 VVEYPFTLEFEIKSRGDVVGKLVRTKHKRKVSCPLVIDSIRTKPIKFKRNTCAYD 310


>ref|XP_004141769.1| PREDICTED: uncharacterized protein LOC101220910 [Cucumis sativus]
           gi|449491744|ref|XP_004158991.1| PREDICTED:
           uncharacterized protein LOC101226433 [Cucumis sativus]
          Length = 311

 Score =  142 bits (358), Expect = 7e-32
 Identities = 68/113 (60%), Positives = 86/113 (76%)
 Frame = +1

Query: 1   IHVSSTPVNLIYSEITVATGALATYFQPRKSRRVVTVNIEGTKVPLYGAGSSFAVSDTKG 180
           IHV+STP++LIYSEI VA+G L  Y+QPR S R V+VN+EG KVP+YGA S+  V  T  
Sbjct: 199 IHVTSTPIDLIYSEIVVASGQLKKYYQPRNSHRRVSVNLEGIKVPMYGAASTLTVPPTSS 258

Query: 181 GVPLTLEFGIRTRGYVVGKLVKTRHRMHITCPILVDSTSNKPMNLKQNSCRYD 339
            VP+TL F IR+RGYVVG+LVKT H   I+CP+ +DSTSNK +  K+NSC Y+
Sbjct: 259 PVPMTLAFKIRSRGYVVGQLVKTTHIKQISCPVGIDSTSNKAIVFKKNSCTYE 311


Top