BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005578
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42885.1| unknown [Lotus japonicus]                               71   8e-11
gb|AAK77127.1|AF362731_1 succinate dehydrogenase subunit 3 [Podo...    63   3e-08
ref|YP_005090401.1| sdh3 gene product (mitochondrion) [Boea hygr...    62   5e-08
ref|YP_004849336.1| succinate dehydrogenase subunit 3 [Cucumis s...    60   1e-07
ref|YP_003587250.1| succinate dehydrogenase subunit 3 [Citrullus...    60   2e-07

>gb|AFK42885.1| unknown [Lotus japonicus]
          Length = 90

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 31/45 (68%), Positives = 36/45 (80%)
 Frame = -3

Query: 140 VLNVRRS*INRCRSCYNCFSGSCCRYWKRL*FFDPFCG*ESIISK 6
           + +VRR  INRCRSCYNCFSGSCCRYWKR+ F + F G +SII K
Sbjct: 10  IRDVRRCKINRCRSCYNCFSGSCCRYWKRIQFINSFRGKKSIIGK 54


>gb|AAK77127.1|AF362731_1 succinate dehydrogenase subunit 3 [Podophyllum peltatum]
          Length = 95

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/48 (66%), Positives = 37/48 (77%)
 Frame = -2

Query: 408 FSYILYFKMGMICFTYSNLYPFFFSVFYSSELILLVVEITAFKALSYH 265
           F Y+LY KMG ICFTY N Y F   +FYSS+LIL++VEITA  ALSYH
Sbjct: 27  FCYLLYLKMGFICFTYENFYQF---LFYSSKLILILVEITAL-ALSYH 70


>ref|YP_005090401.1| sdh3 gene product (mitochondrion) [Boea hygrometrica]
           gi|340549504|gb|AEK53325.1| succinate dehydrogenase
           subunit 3 (mitochondrion) [Boea hygrometrica]
          Length = 150

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/48 (66%), Positives = 38/48 (79%)
 Frame = -2

Query: 408 FSYILYFKMGMICFTYSNLYPFFFSVFYSSELILLVVEITAFKALSYH 265
           F ++LY K+G ICFTY N+Y FF   FYSS+LIL+ VEITAF ALSYH
Sbjct: 39  FFHLLYLKIGFICFTYENVYLFF---FYSSKLILIFVEITAF-ALSYH 82


>ref|YP_004849336.1| succinate dehydrogenase subunit 3 [Cucumis sativus]
           gi|325305594|gb|ADZ10763.1| succinate dehydrogenase
           subunit 3 [Cucumis sativus]
          Length = 105

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/48 (66%), Positives = 37/48 (77%)
 Frame = -2

Query: 408 FSYILYFKMGMICFTYSNLYPFFFSVFYSSELILLVVEITAFKALSYH 265
           F Y+L  KMG+ICFTYSN Y FF   FYS++LIL+ VEITA  ALSYH
Sbjct: 39  FFYLLCLKMGLICFTYSNFYGFF---FYSAKLILISVEITAL-ALSYH 82


>ref|YP_003587250.1| succinate dehydrogenase subunit 3 [Citrullus lanatus]
           gi|295311667|ref|YP_003587234.1| succinate dehydrogenase
           subunit 3 [Citrullus lanatus]
           gi|259156794|gb|ACV96656.1| succinate dehydrogenase
           subunit 3 [Citrullus lanatus]
           gi|259156795|gb|ACV96657.1| succinate dehydrogenase
           subunit 3 [Citrullus lanatus]
          Length = 95

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/48 (66%), Positives = 36/48 (75%)
 Frame = -2

Query: 408 FSYILYFKMGMICFTYSNLYPFFFSVFYSSELILLVVEITAFKALSYH 265
           F Y+L  KMG+ICFTYSN Y FF   FYSS+LIL+  EITA  ALSYH
Sbjct: 39  FFYLLCLKMGLICFTYSNFYRFF---FYSSKLILISAEITAL-ALSYH 82