BLASTX nr result

ID: Coptis23_contig00005565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005565
         (1708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283706.1| PREDICTED: dof zinc finger protein DOF5.2-li...   558   e-156
ref|XP_002323863.1| predicted protein [Populus trichocarpa] gi|2...   525   e-146
ref|XP_002306032.1| predicted protein [Populus trichocarpa] gi|2...   518   e-144
ref|XP_002531852.1| zinc finger protein, putative [Ricinus commu...   513   e-143
gb|ACU80551.1| Dof3 protein [Jatropha curcas]                         499   e-138

>ref|XP_002283706.1| PREDICTED: dof zinc finger protein DOF5.2-like [Vitis vinifera]
          Length = 511

 Score =  558 bits (1438), Expect = e-156
 Identities = 278/460 (60%), Positives = 325/460 (70%), Gaps = 8/460 (1%)
 Frame = +1

Query: 253  SDDDDIDFEEEQLHEKKKDPSGKGYTDIKVKQGSVPLPSEELADP-ISSVNNENPKTPSV 429
            S ++D     E+  E  KD SG   TD + + G+    SEE  DP  +S  NENPKTPS 
Sbjct: 53   SPEEDCVRAGEEGREVDKDTSGGKVTDTRQEDGARSSTSEEFTDPDANSGVNENPKTPSA 112

Query: 430  EKEAGSTKGSRAXXXXXXXXXXXXKTPLKKPDKIIPCPRCNSMDTKFCYYNNYNVNQPRH 609
            +KE  + K S+             KT LKKPDKI+PCPRCNSMDTKFCYYNNYNVNQPRH
Sbjct: 113  DKETATLKCSKNEEEQSETSISQEKT-LKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRH 171

Query: 610  FCKNCQRYWTAGGTMRNVPVGAGRRKNKNSVSHFRHITVSEALQTARTDTLNGIHHPTVK 789
            FCKNCQRYWTAGGTMRNVPVGAGRRKNKNS SH+RHITVSEALQ+ARTD  NGIHHP +K
Sbjct: 172  FCKNCQRYWTAGGTMRNVPVGAGRRKNKNSTSHYRHITVSEALQSARTDVPNGIHHPALK 231

Query: 790  PNGTILTFGSDTPLCESMASVLNIADKTMRNCSSNGFQKPEEQRNPVSC-GGESGDENSN 966
             NGT+LTFGSDTPLCESMASVLN+A+KTMRNC+ NGF KPE+ R PV   GGE+GD++ +
Sbjct: 232  TNGTVLTFGSDTPLCESMASVLNLAEKTMRNCTPNGFHKPEKLRIPVPYGGGENGDDHLS 291

Query: 967  RSCVTGSSSTEEGRMVGLQEPMMQNINGFSPQMPCFPGGPWPYPWNSAQWN------TAV 1128
            +S VT S+S EE     L + +M+N + F PQ+PCFPG PWPYPWNSAQW+        V
Sbjct: 292  KSSVTASNSKEEAGKTALPDQVMRNCHAFPPQIPCFPGAPWPYPWNSAQWSPPVPAIPPV 351

Query: 1129 PPPSFCPSNYPISFFPAPTYWGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGKHSRE 1308
            PPP+FCPS +P+ F+PA  YWGC                              LGKHSR+
Sbjct: 352  PPPAFCPSGFPMPFYPAAAYWGCTVPGAWNIPWVPQPSALNHTAPSSGPNSPTLGKHSRD 411

Query: 1309 GDMLKPGNSEKEDPPKHSGSVGGVWIPKTLRIDDPGEAARSSIWATLGIKNDKSDSFNGG 1488
             +MLK  N  +E+  K + S   +WIPKTLRIDDPGEAARSSIWATLGIKNDK+D  +GG
Sbjct: 412  ENMLKASNFGEEELQKENNSERCLWIPKTLRIDDPGEAARSSIWATLGIKNDKADPISGG 471

Query: 1489 RLFKAFQSKGDEKNHVDENSQVMHANPAAMSRSLNFQESS 1608
            RLFK+FQSK DEKNH+ E S V+ ANPAA+SRSLNF ESS
Sbjct: 472  RLFKSFQSKADEKNHIAETSPVLQANPAALSRSLNFHESS 511


>ref|XP_002323863.1| predicted protein [Populus trichocarpa] gi|222866865|gb|EEF03996.1|
            predicted protein [Populus trichocarpa]
          Length = 506

 Score =  525 bits (1352), Expect = e-146
 Identities = 267/457 (58%), Positives = 319/457 (69%), Gaps = 2/457 (0%)
 Frame = +1

Query: 244  EECSDDDDIDFEEEQLHEKKKDPSGKGYTDIKVKQGSVPLPSEELAD-PISSVNNENPKT 420
            ++ +++D  D  EE      KD  GK   + + + G+ P+ ++E ++   +S  +ENPKT
Sbjct: 57   DDYNNNDKRDHGEEDTETDDKDSVGKTTIENQ-EDGASPVAAKESSNLDATSGTSENPKT 115

Query: 421  PSVEKEAGSTKGSRAXXXXXXXXXXXXKTPLKKPDKIIPCPRCNSMDTKFCYYNNYNVNQ 600
            PSVEKE+ + K S              KT LKKPDKIIPCPRCNSMDTKFCYYNNYNVNQ
Sbjct: 116  PSVEKESTALKTSNTEEEQSDTSNSQEKT-LKKPDKIIPCPRCNSMDTKFCYYNNYNVNQ 174

Query: 601  PRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSVSHFRHITVSEALQTARTDTLNGIHHP 780
            PRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNS SH+RHIT+ EALQ  R D  NG+HHP
Sbjct: 175  PRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASHYRHITIPEALQNGRADVPNGVHHP 234

Query: 781  TVKPNGTILTFGSDTPLCESMASVLNIADKTMRNCSSNGFQKPEEQRNPVSC-GGESGDE 957
            ++K NGT+LTFGSD PL ESMASVLN+ADKTMRNC+ NGF KPE  R PVS  GGE+GD+
Sbjct: 235  SLKTNGTVLTFGSDAPLHESMASVLNLADKTMRNCTMNGFHKPEALRVPVSYGGGENGDD 294

Query: 958  NSNRSCVTGSSSTEEGRMVGLQEPMMQNINGFSPQMPCFPGGPWPYPWNSAQWNTAVPPP 1137
            +SN S VT S+S++E      +E  MQN  G+ PQ+PCFPG PWPYPWNSAQW++ VPPP
Sbjct: 295  HSNGSSVTVSNSSDEAGKSVSKESAMQNYQGYPPQIPCFPGVPWPYPWNSAQWSSPVPPP 354

Query: 1138 SFCPSNYPISFFPAPTYWGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGKHSREGDM 1317
            +FCPS++P+ F+PA  YWGC                              LGKHSR+ ++
Sbjct: 355  AFCPSSFPMPFYPAAAYWGCTVPGAWNVPWLPQPSSPKQTSSSSDPNSPTLGKHSRDENL 414

Query: 1318 LKPGNSEKEDPPKHSGSVGGVWIPKTLRIDDPGEAARSSIWATLGIKNDKSDSFNGGRLF 1497
            LKP NS++E       +   +WIPKTLRIDDPGEAA+SSIW TLGIKNDK  SF G  LF
Sbjct: 415  LKPSNSKEE----LVNTERCLWIPKTLRIDDPGEAAKSSIWTTLGIKNDKPGSFGGRGLF 470

Query: 1498 KAFQSKGDEKNHVDENSQVMHANPAAMSRSLNFQESS 1608
            KAF SK  EKN   E S V+HANPAA+SRSL FQESS
Sbjct: 471  KAFDSK-VEKNRAAETSPVLHANPAALSRSLKFQESS 506


>ref|XP_002306032.1| predicted protein [Populus trichocarpa] gi|222848996|gb|EEE86543.1|
            predicted protein [Populus trichocarpa]
          Length = 503

 Score =  518 bits (1333), Expect = e-144
 Identities = 263/457 (57%), Positives = 313/457 (68%), Gaps = 2/457 (0%)
 Frame = +1

Query: 253  SDDDDIDFEEEQLHEKKKDPSGKGYTDIKVKQGSVPLPSEELADP-ISSVNNENPKTPSV 429
            SD++     EE +    KD   K  T+ K + G  P+ +EE ++P  +S  +ENPKTPS+
Sbjct: 50   SDNNKRYHGEEDIEADDKDSVEKSLTE-KQEDGVSPVATEEPSNPDATSGTSENPKTPSI 108

Query: 430  EKEAGSTKGSRAXXXXXXXXXXXXKTPLKKPDKIIPCPRCNSMDTKFCYYNNYNVNQPRH 609
            EKE+   + SR             KT LKKPDKI+PCPRCNSMDTKFCYYNNYNVNQPRH
Sbjct: 109  EKESEGLQTSRTEEEDSDTSNSPEKT-LKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRH 167

Query: 610  FCKNCQRYWTAGGTMRNVPVGAGRRKNKNSVSHFRHITVSEALQTARTDTLNGIHHPTVK 789
            FCKNCQRYWTAGGTMRNVPVGAGRRKNKNS SH+RHIT+ EALQ  R D  NG++HP++K
Sbjct: 168  FCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASHYRHITIPEALQNVRADVPNGVYHPSMK 227

Query: 790  PNGTILTFGSDTPLCESMASVLNIADKTMRNCSSNGFQKPEEQRNPVSCG-GESGDENSN 966
             NGT+LTFGSDTPL ESMASVLN+ADKT RNC+ NG  KP+  R PVS G GE+GD++SN
Sbjct: 228  TNGTVLTFGSDTPLHESMASVLNLADKTTRNCTRNGSHKPDAVRIPVSYGSGENGDDHSN 287

Query: 967  RSCVTGSSSTEEGRMVGLQEPMMQNINGFSPQMPCFPGGPWPYPWNSAQWNTAVPPPSFC 1146
             S VT S+S +E      +E  MQN  GF P++PCFPG PWPYPWNSAQW++ +PPP+FC
Sbjct: 288  GSSVTVSNSIDEAGKSMSKESAMQNCQGFPPEIPCFPGVPWPYPWNSAQWSSPLPPPAFC 347

Query: 1147 PSNYPISFFPAPTYWGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGKHSREGDMLKP 1326
            P  +P+ F+PA  YWGC                              LGKHSR+ +MLK 
Sbjct: 348  PPGFPMPFYPAAAYWGCTVPGAWNIPWLPQPSSPKQTSSSSGPNSPTLGKHSRDENMLKS 407

Query: 1327 GNSEKEDPPKHSGSVGGVWIPKTLRIDDPGEAARSSIWATLGIKNDKSDSFNGGRLFKAF 1506
             NSE+ +  K + +   +WIPKTLRI DPGEAA+SSIW TLGIKNDK D   G  LFKAF
Sbjct: 408  SNSEEGESAKENNTERCLWIPKTLRIVDPGEAAKSSIWTTLGIKNDKPDLIGGRGLFKAF 467

Query: 1507 QSKGDEKNHVDENSQVMHANPAAMSRSLNFQESS*LG 1617
             SK  EKNH  E S V+ ANPAA+SRSL FQESS  G
Sbjct: 468  DSK-VEKNHEAETSPVLQANPAALSRSLKFQESSYFG 503


>ref|XP_002531852.1| zinc finger protein, putative [Ricinus communis]
            gi|223528502|gb|EEF30530.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 497

 Score =  513 bits (1320), Expect = e-143
 Identities = 265/472 (56%), Positives = 308/472 (65%), Gaps = 19/472 (4%)
 Frame = +1

Query: 250  CSDDDDIDFEEE-----------------QLHEKKKDPSGKGYTDIKVKQGSVPLPSEEL 378
            CS DDD    E                  +  E  KD  G+   + K + GS     EE 
Sbjct: 34   CSADDDCQDRERPSCASSSLEEGDTTGDGEERESDKDAEGETLAESKQENGS-----EES 88

Query: 379  ADPIS-SVNNENPKTPSVEKEAGSTKGSRAXXXXXXXXXXXXKTPLKKPDKIIPCPRCNS 555
            ++P S S   ENPKT SVEK+  ++K S+             KTP KKPDKI+PCPRCNS
Sbjct: 89   SNPDSISGITENPKTSSVEKD-DTSKTSKTEEEQSDTSNSQEKTP-KKPDKILPCPRCNS 146

Query: 556  MDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSVSHFRHITVSEA 735
            MDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNS SH+RHITVSEA
Sbjct: 147  MDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASHYRHITVSEA 206

Query: 736  LQTARTDTLNGIHHPTVKPNGTILTFGSDTPLCESMASVLNIADKTMRNCSSNGFQKPEE 915
            LQ  + D  NGIHHP +K NGT LTFGSDTPL ES+AS LN+ADKT++NC+ NGF KPE 
Sbjct: 207  LQNVQNDIPNGIHHPALKSNGTFLTFGSDTPLHESVASALNLADKTVQNCTRNGFHKPEA 266

Query: 916  QRNPVSCGG-ESGDENSNRSCVTGSSSTEEGRMVGLQEPMMQNINGFSPQMPCFPGGPWP 1092
             R PVS  G E GD +S  S  T S+S +E    G Q  ++QN  GF PQ+PC+PG PWP
Sbjct: 267  LRIPVSYAGVEHGDAHSKGSLATASNSKDEASKSGPQATVIQNCQGFPPQIPCYPGTPWP 326

Query: 1093 YPWNSAQWNTAVPPPSFCPSNYPISFFPAPTYWGCXXXXXXXXXXXXXXXXXXXXXXXXX 1272
            YPWNSAQW++ VPP +FCP  +P+ F+P   YWGC                         
Sbjct: 327  YPWNSAQWSSPVPPTAFCPPGFPMPFYPTTAYWGCTVPGTWNMSWIPQPPSPNETASTSG 386

Query: 1273 XXXXXLGKHSREGDMLKPGNSEKEDPPKHSGSVGGVWIPKTLRIDDPGEAARSSIWATLG 1452
                 LGKHSR+ +MLKP NS  E P K   +   +WIPKTLRIDDPGEAA+SSIW TLG
Sbjct: 387  PNSPTLGKHSRDDNMLKPSNS-GETPEKEKSAERCLWIPKTLRIDDPGEAAKSSIWTTLG 445

Query: 1453 IKNDKSDSFNGGRLFKAFQSKGDEKNHVDENSQVMHANPAAMSRSLNFQESS 1608
            IKND+ DS  G  LFKAF+SKG+EKNH  E S V+ ANPAA+SRSL F+ESS
Sbjct: 446  IKNDRPDSIGGRGLFKAFESKGNEKNHAAETSSVLQANPAALSRSLKFRESS 497


>gb|ACU80551.1| Dof3 protein [Jatropha curcas]
          Length = 518

 Score =  499 bits (1284), Expect = e-138
 Identities = 251/447 (56%), Positives = 305/447 (68%), Gaps = 10/447 (2%)
 Frame = +1

Query: 295  EKKKDPSGKGYTDIKVKQGSVPLPSEELADPISSVNNENPKTPSVEKEAGSTKGSRAXXX 474
            E  KD  G+   + K + G+  + +EE ++P + ++ +NPKT SVEK+  +++ S+    
Sbjct: 74   ESDKDAGGETPLESKQENGTPTVTAEESSNPDAGIS-DNPKTSSVEKDNSTSQTSKTEEE 132

Query: 475  XXXXXXXXXKTPLKKPDKIIPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTM 654
                     KTP KKPDKI+PCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTM
Sbjct: 133  QSDTSNSQEKTP-KKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTM 191

Query: 655  RNVPVGAGRRKNKNSVSHFRHITVSEALQTARTDTLNGIHHPTVKPNGTILTFGSDTPLC 834
            RNVPVGAGRRKNKNS SH+RHITVSEALQ   TD  NG+HHP +K NGT+LTFGSDTPL 
Sbjct: 192  RNVPVGAGRRKNKNSGSHYRHITVSEALQNVGTDIPNGVHHPALKSNGTVLTFGSDTPLH 251

Query: 835  ESMASVLNIADKTMRNCSSNGFQKPEEQRNPVSCGG-ESGDENSNRSCVTGSSSTEEGRM 1011
            ESMASVLN+A+KTM+N   NGF KPE  R PVS GG   GD+NSN   V  S+S ++   
Sbjct: 252  ESMASVLNLAEKTMQNSPRNGFHKPEALRIPVSYGGVGKGDDNSNGPSVMASNSKDDANK 311

Query: 1012 VGLQEPMMQNINGFSPQMPCFPGGPWPYPWNSAQWNTA-----VPPPSFCPSNYPISFFP 1176
            +G QE M++N   F PQ+PCFPG PWPYPWNSAQW++A     V PP+FCP  +P+ F+P
Sbjct: 312  IGSQETMVRNGQSFQPQVPCFPGTPWPYPWNSAQWSSATCLSPVTPPAFCPPGFPMPFYP 371

Query: 1177 APTYWGC----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGKHSREGDMLKPGNSEKE 1344
               YWGC                                  LGKHSR+ ++ KP NS  E
Sbjct: 372  TAAYWGCTVPGTWNMPWIPQPSSPNQTATQTATSSGPNSPTLGKHSRDENVQKPNNS-GE 430

Query: 1345 DPPKHSGSVGGVWIPKTLRIDDPGEAARSSIWATLGIKNDKSDSFNGGRLFKAFQSKGDE 1524
            +P K + +   +WIPKTLRIDDPGEAA+SSIW TLGI NDK D   G  LFKAF+SKGDE
Sbjct: 431  EPGKENNAERCIWIPKTLRIDDPGEAAKSSIWTTLGITNDKVDFVGGRGLFKAFESKGDE 490

Query: 1525 KNHVDENSQVMHANPAAMSRSLNFQES 1605
            K+   E S +++ANPAA+SRSL F+ES
Sbjct: 491  KHRTTEASPLLNANPAALSRSLKFRES 517


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