BLASTX nr result

ID: Coptis23_contig00005562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005562
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271842.1| PREDICTED: uncharacterized protein LOC100252...    68   7e-10
ref|XP_002297715.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_002297734.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002328768.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_002271836.1| PREDICTED: uncharacterized protein LOC100241...    64   1e-08

>ref|XP_002271842.1| PREDICTED: uncharacterized protein LOC100252260 [Vitis vinifera]
          Length = 365

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 27/61 (44%), Positives = 41/61 (67%)
 Frame = -2

Query: 206 LIGSKKSTWDAKLEVYKSFGWSEDEVLCVFKKQPLIMAASVKKINAALDFFMNTFHWTPD 27
           L G KK+ W++K+ V++SFGW E+E + +F KQP  M+ S  +I   LDF +N  +W P+
Sbjct: 229 LCGMKKAKWESKVSVFRSFGWGEEEFIALFVKQPQFMSNSETRIRKCLDFLINELNWMPE 288

Query: 26  D 24
           D
Sbjct: 289 D 289


>ref|XP_002297715.1| predicted protein [Populus trichocarpa]
           gi|224053186|ref|XP_002297717.1| predicted protein
           [Populus trichocarpa] gi|222844973|gb|EEE82520.1|
           predicted protein [Populus trichocarpa]
           gi|222844975|gb|EEE82522.1| predicted protein [Populus
           trichocarpa]
          Length = 386

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/55 (56%), Positives = 39/55 (70%)
 Frame = -2

Query: 209 VLIGSKKSTWDAKLEVYKSFGWSEDEVLCVFKKQPLIMAASVKKINAALDFFMNT 45
           V+IG  +STW  K+E  KS GW+EDEVL  FK+ P I+A S  KI  A+DFF+NT
Sbjct: 245 VMIGMSESTWKRKIEYMKSLGWTEDEVLLTFKRNPDILACSEDKIGRAMDFFVNT 299


>ref|XP_002297734.1| predicted protein [Populus trichocarpa] gi|222844992|gb|EEE82539.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 28/60 (46%), Positives = 40/60 (66%)
 Frame = -2

Query: 209 VLIGSKKSTWDAKLEVYKSFGWSEDEVLCVFKKQPLIMAASVKKINAALDFFMNTFHWTP 30
           V++   KS W  K+EV KS GWSE+E++  FK+ P ++A S +KI  +LDFF+NT    P
Sbjct: 196 VMLSISKSNWRKKIEVMKSLGWSEEEIIVAFKRYPYLLACSEEKIRKSLDFFVNTLKLEP 255


>ref|XP_002328768.1| predicted protein [Populus trichocarpa] gi|222839066|gb|EEE77417.1|
           predicted protein [Populus trichocarpa]
          Length = 364

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 29/55 (52%), Positives = 38/55 (69%)
 Frame = -2

Query: 209 VLIGSKKSTWDAKLEVYKSFGWSEDEVLCVFKKQPLIMAASVKKINAALDFFMNT 45
           VL+   +STW  ++EV KS GWSE EVLC FK+ P ++  S +KI  A+DFF NT
Sbjct: 223 VLVIVSESTWRKRIEVMKSMGWSEGEVLCAFKRFPPLLTCSEEKIRGAMDFFFNT 277


>ref|XP_002271836.1| PREDICTED: uncharacterized protein LOC100241175 [Vitis vinifera]
          Length = 410

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 27/66 (40%), Positives = 42/66 (63%)
 Frame = -2

Query: 200 GSKKSTWDAKLEVYKSFGWSEDEVLCVFKKQPLIMAASVKKINAALDFFMNTFHWTPDDF 21
           G  KSTW+ K+EVY+ +GWS DE++ +F+  P  M+ S KKI + +DF +N   W   + 
Sbjct: 262 GMSKSTWEQKMEVYRRWGWSNDEIVLLFRAFPACMSLSEKKIMSTMDFLVNKMGWKLTEI 321

Query: 20  SRNSLS 3
           +R  +S
Sbjct: 322 TRFPIS 327


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