BLASTX nr result

ID: Coptis23_contig00005561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005561
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271842.1| PREDICTED: uncharacterized protein LOC100252...    67   2e-09
ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002271737.1| PREDICTED: uncharacterized protein LOC100256...    66   3e-09
emb|CBI32246.3| unnamed protein product [Vitis vinifera]               64   1e-08
ref|XP_002269551.1| PREDICTED: uncharacterized protein LOC100261...    64   1e-08

>ref|XP_002271842.1| PREDICTED: uncharacterized protein LOC100252260 [Vitis vinifera]
          Length = 365

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/107 (33%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
 Frame = +1

Query: 1   GPNLGKLISKDISFLTGSLEKHIVPSINFLRSFVPTDVGIAVILNRLKWSSSIQR---NM 171
           G +L  ++S +   L  SL+  I+P I+FL+  +PTD  IA +L   + +  + +    M
Sbjct: 109 GSSLVNIVSTNPVILRRSLQNQIIPCISFLKKVLPTDHKIASLLTAKRGTWVVYKFSEQM 168

Query: 172 VHNIALLLDHGIPKSHISMWMMLNPQTLCFELHKLNEVVLQLKKMGF 312
           V NI  L  HG+P+S+I   ++L P+TL F   +   ++ ++K+MGF
Sbjct: 169 VPNIETLRSHGVPESNILRMLILRPRTLSFNADEFKAILKRVKEMGF 215


>ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
 Frame = +1

Query: 4   PNLGKLISKDISFLTGSLEKHIVPSINFLRSFVPTDVGIAVILNRLKW--SSSIQRNMVH 177
           P+L + +S D + LT SLE  IVPS NFL++ + +D  I     R  W     + +N++ 
Sbjct: 144 PHLARTLSSDPTLLTRSLENQIVPSYNFLKTILRSDEKIVSAFKRTTWIFLEDLSKNLIP 203

Query: 178 NIALLLDHGIPKSHISMWMMLNPQTLCFELHKLNEVVLQLKKMGF 312
           N+ LL   G+P+S IS+ +   P+ +     + +E V +++KMGF
Sbjct: 204 NLELLRKVGVPQSCISLLLTHFPEAMMENHEEFSENVEEVRKMGF 248


>ref|XP_002271737.1| PREDICTED: uncharacterized protein LOC100256578 [Vitis vinifera]
          Length = 463

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/103 (37%), Positives = 63/103 (61%)
 Frame = +1

Query: 7   NLGKLISKDISFLTGSLEKHIVPSINFLRSFVPTDVGIAVILNRLKWSSSIQRNMVHNIA 186
           +L  ++S + S L  SLEK ++P  NFL+S    + G   IL R  WSSS  + +  NIA
Sbjct: 191 DLASILSSEPSILNKSLEKVLIPKHNFLKSVHVNNEGAMKILKRSSWSSS-GKTIAANIA 249

Query: 187 LLLDHGIPKSHISMWMMLNPQTLCFELHKLNEVVLQLKKMGFS 315
           +L + G+P SHIS ++++   T+C +  K +E V ++ +MGF+
Sbjct: 250 VLREIGVPISHIS-FLVVRYHTICQKSDKFSENVKKVVEMGFN 291


>emb|CBI32246.3| unnamed protein product [Vitis vinifera]
          Length = 408

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
 Frame = +1

Query: 1   GPNLGKLISKDISFLTGSLEKHIVPSINFLRSFVPTDVGIAVILNRLKW--SSSIQRNMV 174
           GP+L  +I    S L  SLE H++P+ NFL+S    +  IA  L R  W    S+Q   V
Sbjct: 130 GPDLAGIIVAKPSILKRSLENHVIPNYNFLKSVGMINENIARALRRTYWLTGQSVQNTNV 189

Query: 175 HNIALLLDHGIPKSHISMWMMLNPQTLCFELHKLNEVVLQLKKMGF 312
            NIA L + G+P S+IS ++  +P  +     K +  V ++ +MGF
Sbjct: 190 PNIATLKEIGVPMSNISFFLTCHPSAVSQNKEKFSTNVKKVIEMGF 235


>ref|XP_002269551.1| PREDICTED: uncharacterized protein LOC100261332 [Vitis vinifera]
          Length = 462

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
 Frame = +1

Query: 1   GPNLGKLISKDISFLTGSLEKHIVPSINFLRSFVPTDVGIAVILNRLKW--SSSIQRNMV 174
           GP+L  +I    S L  SLE H++P+ NFL+S    +  IA  L R  W    S+Q   V
Sbjct: 130 GPDLAGIIVAKPSILKRSLENHVIPNYNFLKSVGMINENIARALRRTYWLTGQSVQNTNV 189

Query: 175 HNIALLLDHGIPKSHISMWMMLNPQTLCFELHKLNEVVLQLKKMGF 312
            NIA L + G+P S+IS ++  +P  +     K +  V ++ +MGF
Sbjct: 190 PNIATLKEIGVPMSNISFFLTCHPSAVSQNKEKFSTNVKKVIEMGF 235


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