BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005558
         (1862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268789.1| PREDICTED: WD repeat-containing protein 26 [...   612   e-173
ref|XP_002533626.1| WD-repeat protein, putative [Ricinus communi...   591   e-166
ref|NP_199205.1| transducin/WD40 domain-containing protein [Arab...   570   e-160
ref|XP_003554312.1| PREDICTED: WD repeat-containing protein 26-l...   568   e-159
ref|XP_002865396.1| transducin family protein [Arabidopsis lyrat...   563   e-158

>ref|XP_002268789.1| PREDICTED: WD repeat-containing protein 26 [Vitis vinifera]
          Length = 520

 Score =  612 bits (1579), Expect = e-173
 Identities = 307/492 (62%), Positives = 364/492 (73%)
 Frame = -1

Query: 1862 SLGYXXXXXXXXXXXSTPLNPPQLLSLETQILNNSSNFDTCIETIQNFDTLPEEVRSSAL 1683
            SLGY                 P+   LE Q+LN  +N++  I  +   + L +E R+SAL
Sbjct: 29   SLGYKNSASCLESESGISHKSPESKLLEMQVLN--ANWEDSIGILNGIEDLTDETRASAL 86

Query: 1682 FLLFKHIFTEFLNTGDDLSALSILRKRISVLGVDKERVHKLASGIVFSGNEDMGSCCSSN 1503
            FL+ +    E L+ GDD SAL+ILRKR+S L V +E+VH LA+G++      MG    S+
Sbjct: 87   FLVLQQCLLECLSRGDDSSALTILRKRVSPLKVGREKVHNLAAGMLSLKEMGMGKIDDSS 146

Query: 1502 EDXXXXXXXXXXXXXXXLFPPHVIVPDRRLECLVERAVLAQRDACVYHNSSNEISLYEDH 1323
                             L PP + +P+ RLE LVE A+ AQ D+C+YHNS  EISLYEDH
Sbjct: 147  ---ICELRRKSLVELEKLLPPPITLPEGRLEHLVETAITAQMDSCIYHNSFREISLYEDH 203

Query: 1322 CCGRDQIPTETLQILDSHEDEVWFVQFSNNGDYLASSSSDHTAIIWKVSEEGILSLKHTL 1143
             CGRDQIPT+T+QIL  H+ EVWFVQFS+NG+YLASSS D  AIIWKV E G+L L+H L
Sbjct: 204  YCGRDQIPTQTVQILTEHKHEVWFVQFSHNGEYLASSSRDCAAIIWKVLENGVLILRHML 263

Query: 1142 RSHQNPVSFVAWSPDDTMLLTCGNGEVLKLWDVETGTCKHTFGEKSPIVSSCAWLPDSKR 963
            +SHQNPVSFVAWSPDDTMLLTCGNGEVLKLWDVETGTCKHTFG+   IVSSCAW PDSKR
Sbjct: 264  QSHQNPVSFVAWSPDDTMLLTCGNGEVLKLWDVETGTCKHTFGDHGFIVSSCAWFPDSKR 323

Query: 962  LVCGSSDPNKCIYMWDLDGNELEAWRGVRMPKVSDLAVTPDGEHLISICSEKDIRIYSFR 783
            +VCGSSDP K IYMWD DGNE++AW+G+RMPKV DLAVTPDGE+LISI SEK+IRI +  
Sbjct: 324  IVCGSSDPEKGIYMWDCDGNEIKAWKGMRMPKVLDLAVTPDGENLISIFSEKEIRILNVG 383

Query: 782  SKTERVVKEDHPITSLSVSKNSEFLIVNLNSQEIHLWEIVETGNKPLKYTGHKQGKYVIR 603
            +  E V+ ED+ ITSLSVS++S+FLIVNLNS+EIH+W++     KPLKYTGHKQ KYVIR
Sbjct: 384  TNAEHVISEDYSITSLSVSRDSKFLIVNLNSEEIHMWDVAGKWEKPLKYTGHKQNKYVIR 443

Query: 602  SCFGGVDCMFIASGSENSQVYIWNRQNQKPLEVLTGHSMTVNCVSWNPTQPQMLASASDD 423
            SCFGG  C FIASGSENS VYIWNR N  PLEVL+GH MTVNCVSWNP + QMLASASDD
Sbjct: 444  SCFGGFHCTFIASGSENSLVYIWNRGNSTPLEVLSGHLMTVNCVSWNPRRHQMLASASDD 503

Query: 422  QTIRIWGPSRKK 387
             TIRIWGPS+ +
Sbjct: 504  HTIRIWGPSQPR 515


>ref|XP_002533626.1| WD-repeat protein, putative [Ricinus communis]
            gi|223526484|gb|EEF28755.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 523

 Score =  591 bits (1524), Expect = e-166
 Identities = 292/466 (62%), Positives = 352/466 (75%)
 Frame = -1

Query: 1784 LETQILNNSSNFDTCIETIQNFDTLPEEVRSSALFLLFKHIFTEFLNTGDDLSALSILRK 1605
            LE+QIL    N++ C+ T+     L +E R+SALFL+ K    E L+ GDD  AL++LRK
Sbjct: 55   LESQILEG--NWNGCVNTLNTVKELMDETRASALFLVIKQCLLECLSCGDDSMALAVLRK 112

Query: 1604 RISVLGVDKERVHKLASGIVFSGNEDMGSCCSSNEDXXXXXXXXXXXXXXXLFPPHVIVP 1425
            ++  L + +E+V  LA  ++     D+     + ++               L PP +++P
Sbjct: 113  QVPALRLGREKVCNLAYNLLCLKEVDLSK---TYDNAILELRNVLLKQLEKLLPPPIVLP 169

Query: 1424 DRRLECLVERAVLAQRDACVYHNSSNEISLYEDHCCGRDQIPTETLQILDSHEDEVWFVQ 1245
            + RLE LVE A+ AQ D+C+YHNS   +SL+EDHCC RDQIPTET+QIL  HE+EVWFVQ
Sbjct: 170  EIRLEHLVETAITAQIDSCMYHNSQEAVSLFEDHCCKRDQIPTETVQILTEHENEVWFVQ 229

Query: 1244 FSNNGDYLASSSSDHTAIIWKVSEEGILSLKHTLRSHQNPVSFVAWSPDDTMLLTCGNGE 1065
            FSNNG YLASSSSD TAIIW+V E+  L++K TLRSHQ PVSFVAWSPDDT LLTCGN E
Sbjct: 230  FSNNGHYLASSSSDCTAIIWEVLEDDRLTIKRTLRSHQKPVSFVAWSPDDTKLLTCGNLE 289

Query: 1064 VLKLWDVETGTCKHTFGEKSPIVSSCAWLPDSKRLVCGSSDPNKCIYMWDLDGNELEAWR 885
            VLKLWDVETGTCKHTFG+   IVSSCAW PDSKR VCGSSDP K I MWD  GNE++AWR
Sbjct: 290  VLKLWDVETGTCKHTFGDHGFIVSSCAWFPDSKRFVCGSSDPEKGICMWDCHGNEIKAWR 349

Query: 884  GVRMPKVSDLAVTPDGEHLISICSEKDIRIYSFRSKTERVVKEDHPITSLSVSKNSEFLI 705
            G RMPKV DLAVTPDG HLIS+ S+KDIRI++  +  E+V+ E+HPITSLSVS +S+F I
Sbjct: 350  GTRMPKVLDLAVTPDGVHLISVFSDKDIRIFNLVTNAEQVISEEHPITSLSVSIDSKFFI 409

Query: 704  VNLNSQEIHLWEIVETGNKPLKYTGHKQGKYVIRSCFGGVDCMFIASGSENSQVYIWNRQ 525
            VNLNSQEIHLW++     K L+Y GHKQ KYVIRSCFGG++  FIASGSENSQVYIWNRQ
Sbjct: 410  VNLNSQEIHLWDVAGNWEKALRYMGHKQHKYVIRSCFGGLNSSFIASGSENSQVYIWNRQ 469

Query: 524  NQKPLEVLTGHSMTVNCVSWNPTQPQMLASASDDQTIRIWGPSRKK 387
            N +P+EVL+GH MTVNCVSWNP + QMLASASDDQTIRIWGPS+ K
Sbjct: 470  NSRPIEVLSGHLMTVNCVSWNPRRHQMLASASDDQTIRIWGPSQSK 515


>ref|NP_199205.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
            gi|9758551|dbj|BAB09052.1| WD-repeat protein-like
            [Arabidopsis thaliana] gi|110742722|dbj|BAE99272.1|
            WD-repeat protein-like [Arabidopsis thaliana]
            gi|148535209|gb|ABQ85545.1| will die slowly [Arabidopsis
            thaliana] gi|332007645|gb|AED95028.1| transducin/WD40
            domain-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  570 bits (1470), Expect = e-160
 Identities = 276/467 (59%), Positives = 353/467 (75%), Gaps = 3/467 (0%)
 Frame = -1

Query: 1784 LETQILNNSSNFDTCIETIQN-FDTLPEEVRSSALFLLFKHIFTEFLNTGDDLSALSILR 1608
            LE Q+L  S N+D+C++ +   FD   ++ R++AL+L+FK    E+L  GD   AL++LR
Sbjct: 56   LEKQVL--SGNWDSCVQVLDRIFDNSMDDTRNTALYLVFKQCLLEYLKRGDVSLALNVLR 113

Query: 1607 KRISVLGVDKERVHKLASGIVFSGNEDMGSCCSSNEDXXXXXXXXXXXXXXXLFPPHVIV 1428
            K+  +L + KE++H+LA  IV+S   + G     +                 L P  +++
Sbjct: 114  KQAPLLRMGKEKIHRLACDIVYSKEMESGEV---DNCLVLDLRRKLLVELEKLIPLPIVI 170

Query: 1427 PDRRLECLVERAVLAQRDACVYHNSSNEISLYEDHCCGRDQIPTETLQILDSHEDEVWFV 1248
            P+RRLE LVE AV+ Q D C+YHNS + +SLY+DHCCGRDQIP+ET+QIL +H++EVWFV
Sbjct: 171  PERRLEHLVETAVMDQIDTCMYHNSCDAVSLYKDHCCGRDQIPSETVQILVAHKNEVWFV 230

Query: 1247 QFSNNGDYLASSSSDHTAIIWKVSEEGILSLKHTLRSHQNPVSFVAWSPDDTMLLTCGNG 1068
            QFSN+G YLA++SSD TAIIWKV ++  + LKHTL SHQNPVSFV+WSPDDT LLTCGN 
Sbjct: 231  QFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNA 290

Query: 1067 EVLKLWDVETGTCKHTFGEKSP--IVSSCAWLPDSKRLVCGSSDPNKCIYMWDLDGNELE 894
            EVLKLWDV+TG  +HTFG  +    VSSCAW PDS RLVCGSSDP + I MWD DGNE++
Sbjct: 291  EVLKLWDVDTGVLRHTFGNNNTGFTVSSCAWFPDSTRLVCGSSDPERGIVMWDTDGNEIK 350

Query: 893  AWRGVRMPKVSDLAVTPDGEHLISICSEKDIRIYSFRSKTERVVKEDHPITSLSVSKNSE 714
            AWRG R+PKV DLAVTPDGE +I++ S+K+IRI +  +K ERV+ E+ PITSLS+S + +
Sbjct: 351  AWRGTRIPKVVDLAVTPDGESMITVFSDKEIRILNLETKVERVISEEQPITSLSISGDGK 410

Query: 713  FLIVNLNSQEIHLWEIVETGNKPLKYTGHKQGKYVIRSCFGGVDCMFIASGSENSQVYIW 534
            F IVNL+ QEIHLW++     +PLK++GH+Q KYVIRSCFGG+D  FIASGSE+SQVYIW
Sbjct: 411  FFIVNLSCQEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIW 470

Query: 533  NRQNQKPLEVLTGHSMTVNCVSWNPTQPQMLASASDDQTIRIWGPSR 393
            N +N KPLEVL+GHSMTVNCVSWNP  P+MLASASDDQTIRIWGP +
Sbjct: 471  NLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIWGPGK 517


>ref|XP_003554312.1| PREDICTED: WD repeat-containing protein 26-like [Glycine max]
          Length = 523

 Score =  568 bits (1463), Expect = e-159
 Identities = 287/492 (58%), Positives = 354/492 (71%)
 Frame = -1

Query: 1862 SLGYXXXXXXXXXXXSTPLNPPQLLSLETQILNNSSNFDTCIETIQNFDTLPEEVRSSAL 1683
            SLGY                  ++  LE+ ILN S  +D  I+ + +      E R SAL
Sbjct: 29   SLGYSSSASCLESESGISYKSNEVKLLESLILNGS--WDESIDYLNSIKDELGETRESAL 86

Query: 1682 FLLFKHIFTEFLNTGDDLSALSILRKRISVLGVDKERVHKLASGIVFSGNEDMGSCCSSN 1503
            FL+F+    E+LN G+   AL +LRK++S L   K +VH  A  ++   + ++G+     
Sbjct: 87   FLVFRQCVMEYLNCGEYALALGVLRKQVSALDAGKCKVHSFAKCLLSFKDRELGAV-DGG 145

Query: 1502 EDXXXXXXXXXXXXXXXLFPPHVIVPDRRLECLVERAVLAQRDACVYHNSSNEISLYEDH 1323
            +                LFPP + VP+ RLE LVE  V++  D+C+YH+SS+ ISLYEDH
Sbjct: 146  DVVVHDLRKKLLADLEKLFPPPISVPEGRLEHLVENTVMSWVDSCMYHSSSSPISLYEDH 205

Query: 1322 CCGRDQIPTETLQILDSHEDEVWFVQFSNNGDYLASSSSDHTAIIWKVSEEGILSLKHTL 1143
             C RDQIPT T QIL  H++EVWFVQFSNNG+YLASSS+D TAIIWKV E+G L+LKHTL
Sbjct: 206  HCSRDQIPTTTTQILTGHKNEVWFVQFSNNGEYLASSSNDCTAIIWKVLEDGKLTLKHTL 265

Query: 1142 RSHQNPVSFVAWSPDDTMLLTCGNGEVLKLWDVETGTCKHTFGEKSPIVSSCAWLPDSKR 963
              HQ+ VSFVAWSPDDT LLTCGN EVLKLWDVETGTCKHTFG +  +VSSCAW P+SK+
Sbjct: 266  YGHQHAVSFVAWSPDDTKLLTCGNTEVLKLWDVETGTCKHTFGNQGFVVSSCAWFPNSKQ 325

Query: 962  LVCGSSDPNKCIYMWDLDGNELEAWRGVRMPKVSDLAVTPDGEHLISICSEKDIRIYSFR 783
             VCGSSDP K + MWD DGN +++WRG+RMPKV DLAVTPDGE+LISI  +K+IRI    
Sbjct: 326  FVCGSSDPEKGVCMWDCDGNVIKSWRGMRMPKVVDLAVTPDGEYLISIFMDKEIRILHMG 385

Query: 782  SKTERVVKEDHPITSLSVSKNSEFLIVNLNSQEIHLWEIVETGNKPLKYTGHKQGKYVIR 603
            +  ERV+ E+HPITSLSVS +S+F IVNLNSQEIH+W++    +KPL++ GHKQ KYVIR
Sbjct: 386  TYAERVISEEHPITSLSVSGDSKFFIVNLNSQEIHMWDVAGKWDKPLRFMGHKQHKYVIR 445

Query: 602  SCFGGVDCMFIASGSENSQVYIWNRQNQKPLEVLTGHSMTVNCVSWNPTQPQMLASASDD 423
            SCFGG++  FIASGSENSQVYIWN +N +P+EVL+GHSMTVNCVSWNP  PQMLASASDD
Sbjct: 446  SCFGGLNNTFIASGSENSQVYIWNCRNSRPVEVLSGHSMTVNCVSWNPKIPQMLASASDD 505

Query: 422  QTIRIWGPSRKK 387
             TIRIWGPS +K
Sbjct: 506  YTIRIWGPSLQK 517


>ref|XP_002865396.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297311231|gb|EFH41655.1| transducin family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 523

 Score =  563 bits (1452), Expect = e-158
 Identities = 275/468 (58%), Positives = 352/468 (75%), Gaps = 3/468 (0%)
 Frame = -1

Query: 1787 SLETQILNNSSNFDTCIETIQN-FDTLPEEVRSSALFLLFKHIFTEFLNTGDDLSALSIL 1611
            SLE ++L  S ++D+C+  +   FD   ++ R++A++L+FK    E+L  GD   AL++L
Sbjct: 55   SLEKRVL--SGDWDSCVAVLDRIFDHSKDDTRNTAVYLVFKQCLLEYLKRGDVSLALNVL 112

Query: 1610 RKRISVLGVDKERVHKLASGIVFSGNEDMGSCCSSNEDXXXXXXXXXXXXXXXLFPPHVI 1431
            RK+  +L + KE++H+LA  IV+S   + G   S                   L P  ++
Sbjct: 113  RKQAPMLRMGKEKIHRLACDIVYSKEMESGEVDSC---LVQGLRKKLLVELEKLIPLPIV 169

Query: 1430 VPDRRLECLVERAVLAQRDACVYHNSSNEISLYEDHCCGRDQIPTETLQILDSHEDEVWF 1251
            +P RRLE LVE AV+ Q D+C+YHNS + +SLY+DHCCGRDQIP+ET+QIL +H++EVWF
Sbjct: 170  IPKRRLEHLVETAVMDQIDSCLYHNSWDAVSLYKDHCCGRDQIPSETVQILMAHKNEVWF 229

Query: 1250 VQFSNNGDYLASSSSDHTAIIWKVSEEGILSLKHTLRSHQNPVSFVAWSPDDTMLLTCGN 1071
            VQFSN+G YLA++SSD TAIIWKV ++  + LKHTL SHQNPVSFV+WSPDDT LLTCGN
Sbjct: 230  VQFSNSGKYLATASSDCTAIIWKVLDDSKVELKHTLESHQNPVSFVSWSPDDTKLLTCGN 289

Query: 1070 GEVLKLWDVETGTCKHTFGEKSP--IVSSCAWLPDSKRLVCGSSDPNKCIYMWDLDGNEL 897
             EVLKLWDV+TG  +HTFG  +    VSSCAW PDS RLVCGSSDP + I MWD DGNE+
Sbjct: 290  AEVLKLWDVDTGVLRHTFGNNNTGFTVSSCAWFPDSTRLVCGSSDPERGIVMWDTDGNEI 349

Query: 896  EAWRGVRMPKVSDLAVTPDGEHLISICSEKDIRIYSFRSKTERVVKEDHPITSLSVSKNS 717
            +AWRG R+PKV DLAVTPDGE +I++ S+K+IRI +  +K ERV+ E+ PITSLS+S + 
Sbjct: 350  KAWRGTRIPKVVDLAVTPDGESMITVFSDKEIRILNLETKVERVIPEEQPITSLSISGDG 409

Query: 716  EFLIVNLNSQEIHLWEIVETGNKPLKYTGHKQGKYVIRSCFGGVDCMFIASGSENSQVYI 537
            +F IVNL+ QEIHLW++      PLK++GH+Q KYVIRSCFGG+D  FIASGSE+SQVYI
Sbjct: 410  KFFIVNLSCQEIHLWDLAGEWKLPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYI 469

Query: 536  WNRQNQKPLEVLTGHSMTVNCVSWNPTQPQMLASASDDQTIRIWGPSR 393
            WN +N KPLEVL+GHSMTVNCVSWNP  P+MLASASDDQTIRIWGP +
Sbjct: 470  WNLKNAKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIWGPGK 517