BLASTX nr result

ID: Coptis23_contig00005548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005548
         (870 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67734.1| hypothetical protein VITISV_017638 [Vitis vinifera]    84   3e-14
ref|XP_002265970.1| PREDICTED: putative disease resistance prote...    84   6e-14
ref|XP_003619324.1| Resistance protein [Medicago truncatula] gi|...    80   8e-13
ref|XP_002525457.1| leucine-rich repeat containing protein, puta...    77   5e-12
ref|XP_003601846.1| Nucleotide binding site leucine-rich repeat ...    76   1e-11

>emb|CAN67734.1| hypothetical protein VITISV_017638 [Vitis vinifera]
          Length = 1211

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 43/95 (45%), Positives = 59/95 (62%)
 Frame = +1

Query: 1    GLKTLPEWLKSFTSLRFLQIIYFPNLLCVPDWIHCLTALRVLWINRCDALTTRCQKDTGE 180
            GL TLP+W+ S TSL+ LQI   P L  +P+ I CL+ L+ L I+ C  L  RCQ + GE
Sbjct: 1113 GLATLPDWIGSLTSLKELQISDCPKLKSLPEEIRCLSTLQTLRISLCRHLLERCQMEIGE 1172

Query: 181  DWHKIAHIPEVKVNGIRIQ*KKIFNVSSLDIVSIV 285
            DW KI+H+PE+ +NG R     + + SSL   S +
Sbjct: 1173 DWPKISHVPEIYINGQRQIAGYMXSCSSLSFKSTI 1207


>ref|XP_002265970.1| PREDICTED: putative disease resistance protein RGA3 [Vitis vinifera]
          Length = 1211

 Score = 83.6 bits (205), Expect = 6e-14
 Identities = 39/77 (50%), Positives = 52/77 (67%)
 Frame = +1

Query: 1    GLKTLPEWLKSFTSLRFLQIIYFPNLLCVPDWIHCLTALRVLWINRCDALTTRCQKDTGE 180
            GL TLP+W+ S TSL+ LQI   P L  +P+ I CL+ L+ L I+ C  L  RCQ + GE
Sbjct: 1113 GLATLPDWIGSLTSLKELQISDCPKLKSLPEEIRCLSTLQTLRISLCRHLLERCQMEIGE 1172

Query: 181  DWHKIAHIPEVKVNGIR 231
            DW KI+H+PE+ +NG R
Sbjct: 1173 DWPKISHVPEIYINGQR 1189


>ref|XP_003619324.1| Resistance protein [Medicago truncatula] gi|355494339|gb|AES75542.1|
            Resistance protein [Medicago truncatula]
          Length = 1120

 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 37/72 (51%), Positives = 50/72 (69%)
 Frame = +1

Query: 4    LKTLPEWLKSFTSLRFLQIIYFPNLLCVPDWIHCLTALRVLWINRCDALTTRCQKDTGED 183
            L +LP+WL + TSL+ L+I +FP L  +PD    L  L+ L I+ C  L  RC+K+TGED
Sbjct: 1006 LASLPQWLGAMTSLQTLEIKWFPMLTSLPDSFQELINLKELRISNCPMLMNRCKKETGED 1065

Query: 184  WHKIAHIPEVKV 219
            WHKIAHIP +K+
Sbjct: 1066 WHKIAHIPRLKL 1077


>ref|XP_002525457.1| leucine-rich repeat containing protein, putative [Ricinus communis]
            gi|223535270|gb|EEF36947.1| leucine-rich repeat
            containing protein, putative [Ricinus communis]
          Length = 1177

 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 36/83 (43%), Positives = 55/83 (66%)
 Frame = +1

Query: 1    GLKTLPEWLKSFTSLRFLQIIYFPNLLCVPDWIHCLTALRVLWINRCDALTTRCQKDTGE 180
            GL+TLPEW+++   LR L I   PNL  +P+ +  LT+L  L I +C  L  RC+K+ GE
Sbjct: 1048 GLQTLPEWIENLKLLRELSIWDCPNLTSLPNAMQHLTSLEFLSIWKCPNLEKRCKKEEGE 1107

Query: 181  DWHKIAHIPEVKVNGIRIQ*KKI 249
            DWHKI H+P++++    I+ ++I
Sbjct: 1108 DWHKIKHVPDIEIKDQEIRMEQI 1130


>ref|XP_003601846.1| Nucleotide binding site leucine-rich repeat disease resistance
            protein [Medicago truncatula] gi|355490894|gb|AES72097.1|
            Nucleotide binding site leucine-rich repeat disease
            resistance protein [Medicago truncatula]
          Length = 1136

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 36/75 (48%), Positives = 49/75 (65%)
 Frame = +1

Query: 4    LKTLPEWLKSFTSLRFLQIIYFPNLLCVPDWIHCLTALRVLWINRCDALTTRCQKDTGED 183
            + +LP+WL + TSL+ L I+ FP L  +PD    L  L+ L+I  C  L  RC++  GED
Sbjct: 1019 ITSLPDWLGAMTSLQVLHILKFPKLSSLPDNFQQLQNLQRLYIVACPMLEKRCKRGKGED 1078

Query: 184  WHKIAHIPEVKVNGI 228
            WHKIAHIPE ++N I
Sbjct: 1079 WHKIAHIPEFELNFI 1093


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