BLASTX nr result

ID: Coptis23_contig00005542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005542
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002880301.1| hypothetical protein ARALYDRAFT_904217 [Arab...   127   1e-27
ref|XP_002529134.1| dimethyladenosine transferase, putative [Ric...   126   2e-27
ref|NP_182264.1| dimethyladenosine transferase [Arabidopsis thal...   125   4e-27
emb|CBI36945.3| unnamed protein product [Vitis vinifera]              122   2e-26
ref|XP_002276165.1| PREDICTED: probable dimethyladenosine transf...   122   2e-26

>ref|XP_002880301.1| hypothetical protein ARALYDRAFT_904217 [Arabidopsis lyrata subsp.
           lyrata] gi|297326140|gb|EFH56560.1| hypothetical protein
           ARALYDRAFT_904217 [Arabidopsis lyrata subsp. lyrata]
          Length = 352

 Score =  127 bits (318), Expect = 1e-27
 Identities = 62/73 (84%), Positives = 69/73 (94%), Gaps = 3/73 (4%)
 Frame = +2

Query: 20  MAGGKMRKEKP---SRNPSNHFQGGVSFHKSKGQHILKNPLLVDTIVEKSGIKSSDVILE 190
           MAGGKMRKEKP   +R PSNH+QGG+SFHKSKGQHILKNPLLVD+IV+K+GIKS+DVILE
Sbjct: 1   MAGGKMRKEKPKASNRAPSNHYQGGISFHKSKGQHILKNPLLVDSIVQKAGIKSTDVILE 60

Query: 191 IGPGTGNLTKKLL 229
           IGPGTGNLTKKLL
Sbjct: 61  IGPGTGNLTKKLL 73


>ref|XP_002529134.1| dimethyladenosine transferase, putative [Ricinus communis]
           gi|223531413|gb|EEF33247.1| dimethyladenosine
           transferase, putative [Ricinus communis]
          Length = 350

 Score =  126 bits (317), Expect = 2e-27
 Identities = 63/72 (87%), Positives = 68/72 (94%), Gaps = 2/72 (2%)
 Frame = +2

Query: 20  MAGGKMRKEK--PSRNPSNHFQGGVSFHKSKGQHILKNPLLVDTIVEKSGIKSSDVILEI 193
           MAGGK++KEK   SR PSNH+QGG+SFHKSKGQHILKNPLLVDTIVEKSGIKS+DVILEI
Sbjct: 1   MAGGKIKKEKVKQSRAPSNHYQGGISFHKSKGQHILKNPLLVDTIVEKSGIKSTDVILEI 60

Query: 194 GPGTGNLTKKLL 229
           GPGTGNLTKKLL
Sbjct: 61  GPGTGNLTKKLL 72


>ref|NP_182264.1| dimethyladenosine transferase [Arabidopsis thaliana]
           gi|2529685|gb|AAC62868.1| putative dimethyladenosine
           transferase [Arabidopsis thaliana]
           gi|14532650|gb|AAK64053.1| putative dimethyladenosine
           transferase [Arabidopsis thaliana]
           gi|21280901|gb|AAM44912.1| putative dimethyladenosine
           transferase [Arabidopsis thaliana]
           gi|330255745|gb|AEC10839.1| dimethyladenosine
           transferase [Arabidopsis thaliana]
          Length = 353

 Score =  125 bits (314), Expect = 4e-27
 Identities = 61/73 (83%), Positives = 69/73 (94%), Gaps = 3/73 (4%)
 Frame = +2

Query: 20  MAGGKMRKEKP---SRNPSNHFQGGVSFHKSKGQHILKNPLLVDTIVEKSGIKSSDVILE 190
           MAGGK+RKEKP   +R PSNH+QGG+SFHKSKGQHILKNPLLVD+IV+K+GIKS+DVILE
Sbjct: 1   MAGGKIRKEKPKASNRAPSNHYQGGISFHKSKGQHILKNPLLVDSIVQKAGIKSTDVILE 60

Query: 191 IGPGTGNLTKKLL 229
           IGPGTGNLTKKLL
Sbjct: 61  IGPGTGNLTKKLL 73


>emb|CBI36945.3| unnamed protein product [Vitis vinifera]
          Length = 284

 Score =  122 bits (307), Expect = 2e-26
 Identities = 61/72 (84%), Positives = 67/72 (93%), Gaps = 2/72 (2%)
 Frame = +2

Query: 20  MAGGKMRKEKPSR--NPSNHFQGGVSFHKSKGQHILKNPLLVDTIVEKSGIKSSDVILEI 193
           MAGGKM+KEKPS   + S H+QGGV+FHKSKGQHILKNPLLVD+IVEKSGIKS+DVILEI
Sbjct: 1   MAGGKMKKEKPSHGASASKHYQGGVTFHKSKGQHILKNPLLVDSIVEKSGIKSTDVILEI 60

Query: 194 GPGTGNLTKKLL 229
           GPGTGNLTKKLL
Sbjct: 61  GPGTGNLTKKLL 72


>ref|XP_002276165.1| PREDICTED: probable dimethyladenosine transferase-like [Vitis
           vinifera]
          Length = 350

 Score =  122 bits (307), Expect = 2e-26
 Identities = 61/72 (84%), Positives = 67/72 (93%), Gaps = 2/72 (2%)
 Frame = +2

Query: 20  MAGGKMRKEKPSR--NPSNHFQGGVSFHKSKGQHILKNPLLVDTIVEKSGIKSSDVILEI 193
           MAGGKM+KEKPS   + S H+QGGV+FHKSKGQHILKNPLLVD+IVEKSGIKS+DVILEI
Sbjct: 1   MAGGKMKKEKPSHGASASKHYQGGVTFHKSKGQHILKNPLLVDSIVEKSGIKSTDVILEI 60

Query: 194 GPGTGNLTKKLL 229
           GPGTGNLTKKLL
Sbjct: 61  GPGTGNLTKKLL 72


Top