BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005533
         (1527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234645.1| ethylene-responsive elongation factor EF-Ts ...   417   e-114
ref|NP_192850.2| putative translation elongation factor Ts [Arab...   415   e-113
ref|XP_002282316.1| PREDICTED: elongation factor Ts, mitochondri...   407   e-111
ref|XP_002872550.1| hypothetical protein ARALYDRAFT_489950 [Arab...   406   e-111
ref|XP_002524565.1| elongation factor ts, putative [Ricinus comm...   405   e-110

>ref|NP_001234645.1| ethylene-responsive elongation factor EF-Ts precursor [Solanum
            lycopersicum] gi|5669636|gb|AAD46403.1|AF096247_1
            ethylene-responsive elongation factor EF-Ts precursor
            [Solanum lycopersicum]
          Length = 391

 Score =  417 bits (1072), Expect = e-114
 Identities = 237/387 (61%), Positives = 282/387 (72%), Gaps = 6/387 (1%)
 Frame = +1

Query: 133  MSFSRVVAKNHFGILFNHLGSSRQSVHGYTFLTPQIATLFNSSNELYLGRQ------LFL 294
            M F R V K    I++  L SS  S H Y+ LT    ++  S    +          + +
Sbjct: 1    MVFYRGV-KRPIAIIYKSLNSSICSGHDYSTLTRYGNSIAKSGGYFHQHGNGPRSCAVSI 59

Query: 295  RSFSAEVSSSDQLNLIKLLRERTSAPIKDVKSALVNCNWDIENAQTELRKRGIVLASKKS 474
            R +SAE+SSS+Q+NLIK LRERTSAPIK+VK+ALV  NWDIE AQ +LRKRGIVLASKKS
Sbjct: 60   RRYSAEISSSEQMNLIKQLRERTSAPIKEVKAALVTSNWDIEAAQKDLRKRGIVLASKKS 119

Query: 475  LRTATEGLLALAQNESKAALIELNCETDFVSRNEIFQYXXXXXXXXXXXXXXXPEQVSTA 654
             RTA EGLLALAQNE KAA+IELNCETDFV+RNEIFQY                +Q   A
Sbjct: 120  SRTAAEGLLALAQNERKAAVIELNCETDFVARNEIFQYLALSLAKLALLLEGS-QQSFAA 178

Query: 655  FSLRSDYLEELKINLDHPKLSGETTVQGAITEVAAMVGENVKLRRXXXXXXXXXXXXXXX 834
            F +   +LEELK+NLDHPKLSGE +VQ AITEVAAM+GENVKLRR               
Sbjct: 179  FPI--GHLEELKLNLDHPKLSGEKSVQNAITEVAAMMGENVKLRRGFAMSAPSLGVISTY 236

Query: 835  LHTSPQPGLGRLAGIVTLESEVEKVPLDALLRVGSELAMHVVAAKPQFLSRELVSSEALE 1014
            LHTSPQPG+GR+AGI++LE E + V  DAL RVGSELAMHVVAAKP FL++E VSS+AL 
Sbjct: 237  LHTSPQPGVGRIAGILSLEVEDKNVSEDALQRVGSELAMHVVAAKPLFLTKEDVSSDALS 296

Query: 1015 RERDILKSQAESTGKPQIAIEKMVEGRMRKYMEEVVLLEQKFIVNDAINIKKLIDDLSKE 1194
             ER+ILKSQAES+GKPQIA+EKMVEGR+RKY EEVVL+EQKFIVND +N+K L+ +LSK+
Sbjct: 297  NEREILKSQAESSGKPQIAVEKMVEGRLRKYFEEVVLMEQKFIVNDTMNVKTLLSNLSKD 356

Query: 1195 VGFPVKVGKFFRMEVGEGIRRDETSSE 1275
            VG PVK+G F RMEVGEG++R E S+E
Sbjct: 357  VGSPVKIGSFLRMEVGEGLQRLEASNE 383


>ref|NP_192850.2| putative translation elongation factor Ts [Arabidopsis thaliana]
            gi|75287865|sp|Q5XF75.1|EFTS_ARATH RecName:
            Full=Elongation factor Ts, mitochondrial; Short=EF-Ts;
            Short=EF-TsMt; Flags: Precursor
            gi|52627103|gb|AAU84678.1| At4g11120 [Arabidopsis
            thaliana] gi|55167888|gb|AAV43776.1| At4g11120
            [Arabidopsis thaliana] gi|332657575|gb|AEE82975.1|
            putative translation elongation factor Ts [Arabidopsis
            thaliana]
          Length = 395

 Score =  415 bits (1067), Expect = e-113
 Identities = 232/390 (59%), Positives = 279/390 (71%), Gaps = 9/390 (2%)
 Frame = +1

Query: 133  MSFSRVVAKNHFGILFNHLGSSRQSVHGYTFLTPQIATL--FNSS-----NELYLGRQLF 291
            M+F+R V +   G+ +  + S   S + Y+ +  +  TL  + SS       L  G   F
Sbjct: 1    MAFARAV-RRPIGVFYYSVSSRFSSGNEYSTVASKFETLSQYKSSVPSGYTSLVRGFGNF 59

Query: 292  LRSFSAEV--SSSDQLNLIKLLRERTSAPIKDVKSALVNCNWDIENAQTELRKRGIVLAS 465
            +RSFS+E   + SDQ++LIK LRERTSAPIKDVK++LV CNWD+E AQ +LRKRG VLAS
Sbjct: 60   IRSFSSEAPPAVSDQMSLIKQLRERTSAPIKDVKASLVECNWDLEAAQKDLRKRGKVLAS 119

Query: 466  KKSLRTATEGLLALAQNESKAALIELNCETDFVSRNEIFQYXXXXXXXXXXXXXXXPEQV 645
            KKS RTA EG+LA+AQNE K A+IELNCETDFV+RNEIFQY                +QV
Sbjct: 120  KKSSRTAAEGMLAVAQNEGKVAVIELNCETDFVARNEIFQYLALAMAKHALLVESSSQQV 179

Query: 646  STAFSLRSDYLEELKINLDHPKLSGETTVQGAITEVAAMVGENVKLRRXXXXXXXXXXXX 825
            S  F    +  EE K+NLDHPK++GETTV  A+TEVAA++GENVK RR            
Sbjct: 180  SGVFPFGPELFEEFKLNLDHPKVNGETTVSNAVTEVAAIMGENVKFRRGFLMSKSSAGVL 239

Query: 826  XXXLHTSPQPGLGRLAGIVTLESEVEKVPLDALLRVGSELAMHVVAAKPQFLSRELVSSE 1005
               LHTSPQPGLGR+AGIV+LE E E   L+A+ RVGSELAMHVVAAKP FLS++LVSSE
Sbjct: 240  SAYLHTSPQPGLGRIAGIVSLEVEGENTQLEAIQRVGSELAMHVVAAKPLFLSKDLVSSE 299

Query: 1006 ALERERDILKSQAESTGKPQIAIEKMVEGRMRKYMEEVVLLEQKFIVNDAINIKKLIDDL 1185
            A+  ER+ILKSQAESTGK Q+AIEK+VEGR+RKY EEV L+EQKFIVNDAINIK L+D+L
Sbjct: 300  AMANEREILKSQAESTGKNQMAIEKIVEGRLRKYFEEVALMEQKFIVNDAINIKTLVDNL 359

Query: 1186 SKEVGFPVKVGKFFRMEVGEGIRRDETSSE 1275
            SKEVG PVKV  F R+EVGEGI R E S E
Sbjct: 360  SKEVGSPVKVTDFLRVEVGEGIERLEASDE 389


>ref|XP_002282316.1| PREDICTED: elongation factor Ts, mitochondrial [Vitis vinifera]
            gi|297738982|emb|CBI28227.3| unnamed protein product
            [Vitis vinifera]
          Length = 378

 Score =  407 bits (1045), Expect = e-111
 Identities = 213/329 (64%), Positives = 260/329 (79%)
 Frame = +1

Query: 286  LFLRSFSAEVSSSDQLNLIKLLRERTSAPIKDVKSALVNCNWDIENAQTELRKRGIVLAS 465
            +F R FSAE  +S+ +NLIK LRERTS+PIKDVK+AL++CNWDIE AQ ELRKRG VLAS
Sbjct: 42   IFPRRFSAEAPASEHMNLIKQLRERTSSPIKDVKAALIDCNWDIEAAQKELRKRGKVLAS 101

Query: 466  KKSLRTATEGLLALAQNESKAALIELNCETDFVSRNEIFQYXXXXXXXXXXXXXXXPEQV 645
            K S RTA +GLLALAQNE++AA+IELNCETDFV+RN+IFQY               P   
Sbjct: 102  KMSARTAAQGLLALAQNETRAAVIELNCETDFVARNDIFQYLASSLAKLALSVENPPLSA 161

Query: 646  STAFSLRSDYLEELKINLDHPKLSGETTVQGAITEVAAMVGENVKLRRXXXXXXXXXXXX 825
            +    +  +YLE+LK+N DHPK SGETTVQ AITEVAAM+GENV+LRR            
Sbjct: 162  AGVSPVGPEYLEDLKMNFDHPKFSGETTVQNAITEVAAMMGENVRLRRGFLMSTPNGIVS 221

Query: 826  XXXLHTSPQPGLGRLAGIVTLESEVEKVPLDALLRVGSELAMHVVAAKPQFLSRELVSSE 1005
               LHT P+PGLGR+AG+++LE+E +    DAL RVGSELAMHVVAAKP FL+RELVSSE
Sbjct: 222  TY-LHTCPRPGLGRIAGVLSLEAEDQLSLSDALQRVGSELAMHVVAAKPLFLTRELVSSE 280

Query: 1006 ALERERDILKSQAESTGKPQIAIEKMVEGRMRKYMEEVVLLEQKFIVNDAINIKKLIDDL 1185
            A+E ER+IL+SQAESTGK Q+AIEKMVEGR++KY+EEVVL+EQKF+VND+IN+K ++++L
Sbjct: 281  AMESEREILRSQAESTGKSQLAIEKMVEGRLKKYVEEVVLMEQKFVVNDSINVKTVLNNL 340

Query: 1186 SKEVGFPVKVGKFFRMEVGEGIRRDETSS 1272
            SKEVG  VK+G FFRMEVGEGI+R+ TSS
Sbjct: 341  SKEVGSSVKIGSFFRMEVGEGIQREGTSS 369


>ref|XP_002872550.1| hypothetical protein ARALYDRAFT_489950 [Arabidopsis lyrata subsp.
            lyrata] gi|297318387|gb|EFH48809.1| hypothetical protein
            ARALYDRAFT_489950 [Arabidopsis lyrata subsp. lyrata]
          Length = 394

 Score =  406 bits (1044), Expect = e-111
 Identities = 224/389 (57%), Positives = 274/389 (70%), Gaps = 8/389 (2%)
 Frame = +1

Query: 133  MSFSRVVAKNHFGILFNHLGSSRQSVHGYTFLTPQIATLFNSSNELYLGRQL-------F 291
            M+F+R V +   G+ +  +     S + Y+ +  ++ TL    + +  G          F
Sbjct: 1    MAFARAV-RRPIGVFYYSVSGRFSSGNDYSTVASKLETLSQYKSSVSSGYTSPVRGFGSF 59

Query: 292  LRSFSAEVSS-SDQLNLIKLLRERTSAPIKDVKSALVNCNWDIENAQTELRKRGIVLASK 468
            +RSFS+E  + SDQ++LIK LRERTSAPIKDVK++LV CNWD+E AQ +LRKRG VLASK
Sbjct: 60   IRSFSSEAPAVSDQMSLIKQLRERTSAPIKDVKASLVECNWDLEAAQKDLRKRGKVLASK 119

Query: 469  KSLRTATEGLLALAQNESKAALIELNCETDFVSRNEIFQYXXXXXXXXXXXXXXXPEQVS 648
            KS RTA EG+LA+AQNE K  +IELNCETDFV+RNEIFQY                +QVS
Sbjct: 120  KSSRTAAEGMLAVAQNEGKVVVIELNCETDFVARNEIFQYLALAMAKHALLVENSSQQVS 179

Query: 649  TAFSLRSDYLEELKINLDHPKLSGETTVQGAITEVAAMVGENVKLRRXXXXXXXXXXXXX 828
                   +  EE K+NLDHPK++GETTV  A+TEVAA++GENVK RR             
Sbjct: 180  GVLPFGPELFEEFKLNLDHPKVNGETTVSNAVTEVAAIMGENVKFRRGFLMSKSSAGVLS 239

Query: 829  XXLHTSPQPGLGRLAGIVTLESEVEKVPLDALLRVGSELAMHVVAAKPQFLSRELVSSEA 1008
              LHTSPQPGLGR+AGIV+LE E E   L+A+ RVGSELAM VVAAKP FLS++LVSSEA
Sbjct: 240  AYLHTSPQPGLGRIAGIVSLEVEGENTQLEAIQRVGSELAMQVVAAKPLFLSKDLVSSEA 299

Query: 1009 LERERDILKSQAESTGKPQIAIEKMVEGRMRKYMEEVVLLEQKFIVNDAINIKKLIDDLS 1188
            +  ER+ILKSQAESTGK Q+AIEK+VEGR+RKY EEV L+EQKFI+NDAINIK L+D+LS
Sbjct: 300  IANEREILKSQAESTGKNQMAIEKIVEGRLRKYFEEVALMEQKFILNDAINIKTLVDNLS 359

Query: 1189 KEVGFPVKVGKFFRMEVGEGIRRDETSSE 1275
            KEVG PVKV  F R+EVGEGI R E S E
Sbjct: 360  KEVGSPVKVTNFLRVEVGEGIERLEASDE 388


>ref|XP_002524565.1| elongation factor ts, putative [Ricinus communis]
            gi|313118247|sp|B9SEZ6.1|EFTS_RICCO RecName:
            Full=Elongation factor Ts, mitochondrial; Short=EF-Ts;
            Short=EF-TsMt; Flags: Precursor
            gi|223536118|gb|EEF37773.1| elongation factor ts,
            putative [Ricinus communis]
          Length = 379

 Score =  405 bits (1042), Expect = e-110
 Identities = 217/330 (65%), Positives = 259/330 (78%), Gaps = 1/330 (0%)
 Frame = +1

Query: 286  LFLRSFSAEV-SSSDQLNLIKLLRERTSAPIKDVKSALVNCNWDIENAQTELRKRGIVLA 462
            +F+R FSA   ++++Q++LIK LRERTSAPIKDVK++LV+CNWDIE AQ +LRKRG VLA
Sbjct: 41   MFVRLFSAHAPAAAEQMSLIKQLRERTSAPIKDVKASLVDCNWDIEAAQKDLRKRGKVLA 100

Query: 463  SKKSLRTATEGLLALAQNESKAALIELNCETDFVSRNEIFQYXXXXXXXXXXXXXXXPEQ 642
            SKKS R ATEGLLALAQNE KAALIELNCETDFV+RN+IFQ                 +Q
Sbjct: 101  SKKSGRAATEGLLALAQNEGKAALIELNCETDFVARNDIFQCLALSLAKQALLTENTAQQ 160

Query: 643  VSTAFSLRSDYLEELKINLDHPKLSGETTVQGAITEVAAMVGENVKLRRXXXXXXXXXXX 822
             S    +  + LE+L INL+HPK+SGETTVQ AITEVAAM+GENVKLRR           
Sbjct: 161  ASGIHPVGPECLEDLMINLEHPKISGETTVQNAITEVAAMMGENVKLRRGFVMSTSLPGV 220

Query: 823  XXXXLHTSPQPGLGRLAGIVTLESEVEKVPLDALLRVGSELAMHVVAAKPQFLSRELVSS 1002
                LHTSPQPGLGR+AG+++LE E     LD L  VGSELAMHVVAAKP FL++ELVSS
Sbjct: 221  LSTYLHTSPQPGLGRIAGLLSLEIEDGNSQLDVLHHVGSELAMHVVAAKPLFLTKELVSS 280

Query: 1003 EALERERDILKSQAESTGKPQIAIEKMVEGRMRKYMEEVVLLEQKFIVNDAINIKKLIDD 1182
            +ALE ER+ILKSQAESTGK Q+AIEKMVEGR+RKY EEVVL+EQKFI+NDA+N+K ++++
Sbjct: 281  DALESEREILKSQAESTGKSQMAIEKMVEGRLRKYYEEVVLMEQKFIINDAVNVKTVLNN 340

Query: 1183 LSKEVGFPVKVGKFFRMEVGEGIRRDETSS 1272
            LSKEVG PVK+G FFRMEVGEGI+R E +S
Sbjct: 341  LSKEVGSPVKIGSFFRMEVGEGIQRLEATS 370