BLASTX nr result

ID: Coptis23_contig00005515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005515
         (1428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524929.1| chromatin binding protein, putative [Ricinus...   380   e-103
ref|XP_003524665.1| PREDICTED: nuA4 complex subunit EAF3 homolog...   371   e-100
ref|XP_002283618.1| PREDICTED: mortality factor 4-like protein 1...   368   2e-99
ref|XP_003550033.1| PREDICTED: nuA4 complex subunit EAF3 homolog...   366   7e-99
ref|XP_002866959.1| MRG family protein [Arabidopsis lyrata subsp...   361   2e-97

>ref|XP_002524929.1| chromatin binding protein, putative [Ricinus communis]
            gi|223535764|gb|EEF37426.1| chromatin binding protein,
            putative [Ricinus communis]
          Length = 318

 Score =  380 bits (975), Expect = e-103
 Identities = 195/333 (58%), Positives = 247/333 (74%), Gaps = 3/333 (0%)
 Frame = +3

Query: 45   MGSSNRDN---ESDTDFNEPKTDQESDFIEGEKVLAYHGPCIYKAKVQKVELSREEGKYY 215
            MGSS++D+   + +T   +        F EGE+VLAYHGP IY+AKVQK EL ++E +Y+
Sbjct: 1    MGSSSKDDSGSDGETSSGDAPPSNSGIFSEGERVLAYHGPRIYEAKVQKAELRKKEWRYF 60

Query: 216  VHYLGWNKXXXXXXXXXXXXXSWDEWVEIDRLLKFTEENIEKQEAQNKKQGGDKNPKSGG 395
            VHYLGWNK             +WDEW+  DRLLK TEEN+ KQ+A  KKQG DK+ K G 
Sbjct: 61   VHYLGWNK-------------NWDEWIGTDRLLKHTEENVVKQQALEKKQGVDKSSKLG- 106

Query: 396  RSTQSKPKSSTEARAEKEDLKNYVGRNKKRKVESGTEEKDTVSTNKHVKVQIPSTLKKQL 575
            RS Q+KPK+ST+A+ +KED K+ V + KKRK +SG E KD +S  K VK+QIPSTLKKQL
Sbjct: 107  RSAQTKPKTSTDAKVDKEDAKSNVAKGKKRKSDSGIE-KDNLSAEKLVKIQIPSTLKKQL 165

Query: 576  LDDCEYVTQLGKLVKLPRAPCVDDIMKKYLDHKSKKDAIIGESVGEILKGLRSYFDKALP 755
            +DD E+V Q  KLV+LPR+P VDDI+ KYL+++SKKD ++ +S+GEILKG+R YFDKALP
Sbjct: 166  VDDWEFVIQQDKLVRLPRSPNVDDILTKYLEYRSKKDGMMTDSIGEILKGIRCYFDKALP 225

Query: 756  IMLLYKKEFQQYREAIANNTSPSTVYGAEHLLRLFVKLPEMLTYANIDEETMTQLLQNLH 935
            +MLLYKKE  QY +A+ N+ SPST+YGAEHLLRLFVKLPE+L Y NI+EET+ +L Q L 
Sbjct: 226  VMLLYKKERHQYDDAVENDASPSTIYGAEHLLRLFVKLPELLAYVNIEEETLARLQQKLL 285

Query: 936  DFLKFLQKSQSTFFLSTYDVSQGIEANSMEDDD 1034
            DFLKFLQK+QSTFFLS YD S+  E      D+
Sbjct: 286  DFLKFLQKNQSTFFLSAYDGSKVSEGKGKGKDE 318


>ref|XP_003524665.1| PREDICTED: nuA4 complex subunit EAF3 homolog [Glycine max]
          Length = 319

 Score =  371 bits (953), Expect = e-100
 Identities = 194/334 (58%), Positives = 247/334 (73%), Gaps = 4/334 (1%)
 Frame = +3

Query: 45   MGSSNRDNESDTDFNEPKTDQESD----FIEGEKVLAYHGPCIYKAKVQKVELSREEGKY 212
            MG+S++DN+S T  +    D +      + EGEKVLAYHGP IY+AKVQK E+ + E KY
Sbjct: 1    MGNSSKDNDSATSADASAGDVQPSNSAVYSEGEKVLAYHGPRIYEAKVQKAEIRKSEWKY 60

Query: 213  YVHYLGWNKXXXXXXXXXXXXXSWDEWVEIDRLLKFTEENIEKQEAQNKKQGGDKNPKSG 392
            +VHYLGW+K             +WDEWV  +RL+K TEEN+ KQ+A +KKQ  DKN KSG
Sbjct: 61   FVHYLGWSK-------------NWDEWVGEERLMKHTEENVMKQQALDKKQNVDKNVKSG 107

Query: 393  GRSTQSKPKSSTEARAEKEDLKNYVGRNKKRKVESGTEEKDTVSTNKHVKVQIPSTLKKQ 572
             RS+Q K KSST+A+ +KED+KN V + KKRK ++G E K + +  K VK+QIP+TLKKQ
Sbjct: 108  -RSSQGKAKSSTDAKMDKEDVKNNVSKGKKRKHDAGVE-KGSGTVEKLVKIQIPATLKKQ 165

Query: 573  LLDDCEYVTQLGKLVKLPRAPCVDDIMKKYLDHKSKKDAIIGESVGEILKGLRSYFDKAL 752
            L+DD + VTQ  KLVKLPR+P VD+I+ KYL++KSKKD I  +S+GEILKG+R YFDKAL
Sbjct: 166  LVDDWDSVTQQDKLVKLPRSPTVDEILTKYLEYKSKKDGIAPDSIGEILKGIRCYFDKAL 225

Query: 753  PIMLLYKKEFQQYREAIANNTSPSTVYGAEHLLRLFVKLPEMLTYANIDEETMTQLLQNL 932
            P+MLLYKKE +QY +AI +N SPST+YGAEHLLRLFVKLPE+L Y  I+EET+ +L Q L
Sbjct: 226  PMMLLYKKERKQYNDAIVDNVSPSTIYGAEHLLRLFVKLPELLAYVTIEEETLNRLQQKL 285

Query: 933  HDFLKFLQKSQSTFFLSTYDVSQGIEANSMEDDD 1034
             DFLKFLQK+QSTFFLS YD ++  E      D+
Sbjct: 286  LDFLKFLQKNQSTFFLSAYDGTKVSEGKGKGKDE 319


>ref|XP_002283618.1| PREDICTED: mortality factor 4-like protein 1 [Vitis vinifera]
            gi|296087392|emb|CBI33766.3| unnamed protein product
            [Vitis vinifera]
          Length = 321

 Score =  368 bits (944), Expect = 2e-99
 Identities = 196/331 (59%), Positives = 242/331 (73%), Gaps = 7/331 (2%)
 Frame = +3

Query: 45   MGSSNRD------NESDTDFNEPKTDQESDFIEGEKVLAYHGPCIYKAKVQKVELSREEG 206
            MGSSN         ++DT   +        F EGEKVLAYHGP IY+AKVQK E  ++E 
Sbjct: 1    MGSSNTGVKDDSTTDADTSTGDLPASNSGTFSEGEKVLAYHGPRIYEAKVQKAEFRKKEW 60

Query: 207  KYYVHYLGWNKXXXXXXXXXXXXXSWDEWVEIDRLLKFTEENIEKQEAQNKKQGGDKNPK 386
            +Y+VHYLGWNK             +WDEWV +DRL+K TEEN+ KQ+A +KKQG +KNPK
Sbjct: 61   RYFVHYLGWNK-------------NWDEWVGMDRLMKHTEENVLKQQALDKKQGAEKNPK 107

Query: 387  SGGRSTQSKPKSSTEARAEKEDLKNYVGRNKKRKVESGTEEKDTVSTNKHVKVQIPSTLK 566
            SG RS Q+KPKSST+A+ EKEDLK+YV R K+RK +SG E KD  ST K VK+ IP+TLK
Sbjct: 108  SG-RSAQAKPKSSTDAKVEKEDLKSYVARGKRRKSDSGIE-KDNASTEKLVKIPIPATLK 165

Query: 567  KQLLDDCEYVTQLGKLVKLPRAPCVDDIMKKYLDHKSKKDAIIGESVGEILKGLRSYFDK 746
            KQL+DD ++VTQ  KLVKLPR P VD I+ KYL+++ KKD  + + V EIL GLRSYFD+
Sbjct: 166  KQLVDDWDFVTQQDKLVKLPRIPNVDAILIKYLEYRIKKDGTMTDYVAEILNGLRSYFDR 225

Query: 747  ALPIMLLYKKEFQQYREAIAN-NTSPSTVYGAEHLLRLFVKLPEMLTYANIDEETMTQLL 923
            ALP+MLLYKKE QQ++EAI + + SPSTVYGAEHLLRLFVKLPE+L   NI+EET+  + 
Sbjct: 226  ALPMMLLYKKERQQFQEAIYHPDLSPSTVYGAEHLLRLFVKLPELLACVNIEEETLIGMQ 285

Query: 924  QNLHDFLKFLQKSQSTFFLSTYDVSQGIEAN 1016
            Q   DFLKFLQK+QSTFFLS Y+ S+  E +
Sbjct: 286  QKFIDFLKFLQKNQSTFFLSAYEGSKSSEGS 316


>ref|XP_003550033.1| PREDICTED: nuA4 complex subunit EAF3 homolog [Glycine max]
          Length = 319

 Score =  366 bits (940), Expect = 7e-99
 Identities = 190/320 (59%), Positives = 240/320 (75%), Gaps = 4/320 (1%)
 Frame = +3

Query: 45  MGSSNRDNESDTDFNEPKTD----QESDFIEGEKVLAYHGPCIYKAKVQKVELSREEGKY 212
           MG+S++DN+S T  +    D        + EGEKVLAYHGP IY+AKVQK E+ + E KY
Sbjct: 1   MGNSSKDNDSATSADASAGDIPPSNSGVYSEGEKVLAYHGPRIYEAKVQKTEIRKSEWKY 60

Query: 213 YVHYLGWNKXXXXXXXXXXXXXSWDEWVEIDRLLKFTEENIEKQEAQNKKQGGDKNPKSG 392
           +VHYLGW+K             +WDEWV  +RL+K TEEN+ KQ+A +KKQ  DKN KSG
Sbjct: 61  FVHYLGWSK-------------NWDEWVGEERLMKHTEENVLKQQALDKKQNVDKNVKSG 107

Query: 393 GRSTQSKPKSSTEARAEKEDLKNYVGRNKKRKVESGTEEKDTVSTNKHVKVQIPSTLKKQ 572
            RS+Q K K ST+A+ +KED+KN V + KKRK ++G E K + +  K VK+QIP+TLKKQ
Sbjct: 108 -RSSQGKAKISTDAKMDKEDVKNNVSKGKKRKHDAGVE-KGSGTVEKLVKIQIPATLKKQ 165

Query: 573 LLDDCEYVTQLGKLVKLPRAPCVDDIMKKYLDHKSKKDAIIGESVGEILKGLRSYFDKAL 752
           L+DD + VTQ  KLVKLPR+P VD+IM KYL++KSKKD +  +S+GEILKG+R YFDKAL
Sbjct: 166 LVDDWDSVTQQDKLVKLPRSPTVDEIMTKYLEYKSKKDGVAPDSIGEILKGIRCYFDKAL 225

Query: 753 PIMLLYKKEFQQYREAIANNTSPSTVYGAEHLLRLFVKLPEMLTYANIDEETMTQLLQNL 932
           P+MLLYKKE +QY ++I +N SPST+YGAEHLLRLFVKLPE+L Y  I+EET+ +L Q L
Sbjct: 226 PMMLLYKKERKQYNDSIVDNVSPSTIYGAEHLLRLFVKLPELLAYVTIEEETLNRLQQKL 285

Query: 933 HDFLKFLQKSQSTFFLSTYD 992
            DFLKFLQK+QSTFFLS YD
Sbjct: 286 LDFLKFLQKNQSTFFLSAYD 305


>ref|XP_002866959.1| MRG family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297312795|gb|EFH43218.1| MRG family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 320

 Score =  361 bits (927), Expect = 2e-97
 Identities = 191/335 (57%), Positives = 245/335 (73%), Gaps = 5/335 (1%)
 Frame = +3

Query: 45   MGSSNRDNE-SDTDFNEPKTDQESD---FIEGEKVLAYHGPCIYKAKVQKVELSREEGKY 212
            MGSS+++   SD D         +D   F EGE+VLAYHGP +Y AKVQKVEL ++E KY
Sbjct: 1    MGSSSKEETASDGDTASGGASPSNDGRLFSEGERVLAYHGPRVYGAKVQKVELRKKEWKY 60

Query: 213  YVHYLGWNKXXXXXXXXXXXXXSWDEWVEIDRLLKFTEENIEKQEAQNKKQGGDKNPKSG 392
            +VHYLGWNK             +WDEWV  DRLLK TEEN+ KQ+A +KKQG +K  KSG
Sbjct: 61   FVHYLGWNK-------------NWDEWVSADRLLKHTEENLVKQKALDKKQGVEKGTKSG 107

Query: 393  GRSTQSKPKSSTEARAEKEDLKNYVGRNKKRKVESGTEEKDTVSTNKHVKVQIPSTLKKQ 572
             RS Q+K +SS + +A+K+D K    + KKRK +SG E KD VS  K +K+QIP+TLKKQ
Sbjct: 108  -RSAQTKTRSSADTKADKDDTKTNAAKGKKRKHDSGNE-KDNVSAEKLMKIQIPATLKKQ 165

Query: 573  LLDDCEYVTQLGKLVKLPRAPCVDDIMKKYLDHKSKKDAIIGESVGEILKGLRSYFDKAL 752
            L+DD EY+ Q  K+VKLPR+P VD+I+ KYL+ K+KKD +I +SV EILKG+RSYFDKAL
Sbjct: 166  LIDDWEYIAQKDKVVKLPRSPNVDEILAKYLEFKTKKDGMITDSVAEILKGIRSYFDKAL 225

Query: 753  PIMLLYKKEFQQYREAIANNTSPSTVYGAEHLLRLFVKLPEMLTYANIDEETMTQLLQNL 932
            P+MLLYKKE +QY+E+I ++TSPSTVYGAEHLLRLFVKLPE+L+Y N++EET +++ Q L
Sbjct: 226  PVMLLYKKERRQYQESIVDDTSPSTVYGAEHLLRLFVKLPELLSYVNMEEETWSRMQQTL 285

Query: 933  HDFLKFLQKSQSTFFL-STYDVSQGIEANSMEDDD 1034
             DFLKF+QK+Q+TF L S YD  +  +      DD
Sbjct: 286  SDFLKFIQKNQNTFLLPSAYDSDKVSDGKGKGKDD 320


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