BLASTX nr result
ID: Coptis23_contig00005507
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00005507
(707 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003599422.1| Cc-nbs-lrr resistance protein [Medicago trun... 115 2e-28
ref|XP_002301713.1| nbs-lrr resistance protein [Populus trichoca... 112 2e-28
ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trich... 105 2e-28
ref|XP_002301715.1| predicted protein [Populus trichocarpa] gi|2... 112 2e-28
ref|XP_003599404.1| Cc-nbs-lrr resistance protein [Medicago trun... 130 3e-28
>ref|XP_003599422.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
gi|355488470|gb|AES69673.1| Cc-nbs-lrr resistance protein
[Medicago truncatula]
Length = 1309
Score = 115 bits (287), Expect(2) = 2e-28
Identities = 71/170 (41%), Positives = 102/170 (60%), Gaps = 2/170 (1%)
Frame = +2
Query: 8 LPKSVCSLRTLQILVLSNNRKITMLPLSIGNLRHLRYLDLSETNITSLPESTCNLTNLQT 187
LPK L+ L++L LS IT LP SIGNL +RYLDLS T I SLP++ CNL NLQT
Sbjct: 575 LPK----LKRLRVLSLSKYTNITKLPDSIGNLVQMRYLDLSLTRIKSLPDTICNLFNLQT 630
Query: 188 LKLFRCPNFKVFPKYLGNIRSLRHLDFFFHGGGVLTGMPVGIGQLTCLETLSMFAVCSST 367
LF C + P +GN+ +L HLD G + +P+ I +L L+TL++F V
Sbjct: 631 FILFGCCDLCELPANMGNLINLHHLDISETG---INELPMDIVRLENLQTLTVFIVGKLQ 687
Query: 368 ECAGIQELERLNQIKGELTIKGLGHVCNQKDAERSN--DKKRIEKLNVWW 511
I+EL + + ++G+LTIK L +V + +A +N K++IE+L + W
Sbjct: 688 VGLSIKELRKFSHLQGKLTIKNLNNVVDATEAHDANLKSKEKIEELELLW 737
Score = 37.0 bits (84), Expect(2) = 2e-28
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +3
Query: 555 REVLEGLHPHTNIQEFQIQRYPGVFLPSWLGTSRTLPKLISLSL 686
+ VLE LHP N+++ I Y G P+WLG S + ++S+++
Sbjct: 748 KNVLEMLHPSVNLKKLIIDLYSGTSFPNWLGNS-SFSNMVSINI 790
>ref|XP_002301713.1| nbs-lrr resistance protein [Populus trichocarpa]
gi|222843439|gb|EEE80986.1| nbs-lrr resistance protein
[Populus trichocarpa]
Length = 1109
Score = 112 bits (280), Expect(2) = 2e-28
Identities = 69/150 (46%), Positives = 93/150 (62%), Gaps = 2/150 (1%)
Frame = +2
Query: 68 KITMLPLSIGNLRHLRYLDLSETNITSLPESTCNLTNLQTLKLFRCPNFKVFPKYLGNIR 247
K+T LP SI NL+HLRYLD+S + I LPEST +L NLQTL L C + PK + +++
Sbjct: 585 KVTKLPESICNLKHLRYLDVSGSFIHKLPESTISLQNLQTLILRNCTVLHMLPKDMKDMK 644
Query: 248 SLRHLDFFFHGGGVLTGMPVGIGQLTCLETLSMFAVCSSTECAGIQELERLNQIKGELTI 427
+L++LD G L MP G+GQLTCL+ LSMF V + I EL RLN + GEL I
Sbjct: 645 NLKYLD--ITGCEELRCMPAGMGQLTCLQKLSMFIV-GKHDGHNIGELNRLNFLGGELRI 701
Query: 428 KGLGHVCNQKDAERSN--DKKRIEKLNVWW 511
K L ++ +A +N KK ++ LN+ W
Sbjct: 702 KNLDNIQGLTEARDANLMGKKNLQSLNLSW 731
Score = 39.7 bits (91), Expect(2) = 2e-28
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +3
Query: 552 SREVLEGLHPHTNIQEFQIQRYPGVFLPSWLGTSRTLPKLISLSL 686
S EVL GL PH+N+++ I Y G+ P+W+ LP L+ +S+
Sbjct: 744 SEEVLCGLQPHSNLKQLCISGYQGIKFPNWM-MDLLLPNLVQISV 787
>ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
gi|222845009|gb|EEE82556.1| cc-nbs-lrr resistance protein
[Populus trichocarpa]
Length = 1093
Score = 105 bits (261), Expect(2) = 2e-28
Identities = 69/166 (41%), Positives = 95/166 (57%), Gaps = 2/166 (1%)
Frame = +2
Query: 20 VCSLRTLQILVLSNNRKITMLPLSIGNLRHLRYLDLSETNITSLPESTCNLTNLQTLKLF 199
+ SLR L+ L L + I LP +GNLRH+R+LDLS T+I LPES C+L NLQTL L
Sbjct: 561 ILSLRCLRSLDLCYSA-IKELPDLMGNLRHIRFLDLSHTSIRVLPESICSLYNLQTLVLI 619
Query: 200 RCPNFKVFPKYLGNIRSLRHLDFFFHGGGVLTGMPVGIGQLTCLETLSMFAVCSSTECAG 379
C N P ++ +LRHL+ G G L MP IG+LT L+ L C G
Sbjct: 620 NCKNLHALPGDTNHLVNLRHLN--LTGCGQLISMPPDIGKLTSLQRLHRIVAGKGIGC-G 676
Query: 380 IQELERLNQIKGELTIKGLGHVCNQKDAERSNDKKR--IEKLNVWW 511
I EL+ +N+++ L I +G V N +A+ +N KK+ I +L + W
Sbjct: 677 IGELKNMNELRATLCIDTVGDVPNITEAKEANLKKKQYINELVLRW 722
Score = 47.0 bits (110), Expect(2) = 2e-28
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 22/77 (28%)
Frame = +3
Query: 543 ENISREVLEGLHPHTNIQEFQIQRYPGVFLPSWLGTSR---------------------- 656
+ I E+LE L PHTN++E +I YPG P+W+G S
Sbjct: 728 DGIDDELLECLEPHTNLRELRIDVYPGAKFPNWMGYSSLSHLEKIEFFHCNYCKTLPPLG 787
Query: 657 TLPKLISLSLYRMPNVE 707
LP L SLS+Y M VE
Sbjct: 788 QLPSLKSLSIYMMCEVE 804
>ref|XP_002301715.1| predicted protein [Populus trichocarpa] gi|222843441|gb|EEE80988.1|
predicted protein [Populus trichocarpa]
Length = 626
Score = 112 bits (280), Expect(2) = 2e-28
Identities = 69/150 (46%), Positives = 93/150 (62%), Gaps = 2/150 (1%)
Frame = +2
Query: 68 KITMLPLSIGNLRHLRYLDLSETNITSLPESTCNLTNLQTLKLFRCPNFKVFPKYLGNIR 247
K+T LP SI NL+HLRYLD+S + I LPEST +L NLQTL L C + PK + +++
Sbjct: 66 KVTKLPESICNLKHLRYLDVSGSFIHKLPESTISLQNLQTLILRNCTVLHMLPKDMKDMK 125
Query: 248 SLRHLDFFFHGGGVLTGMPVGIGQLTCLETLSMFAVCSSTECAGIQELERLNQIKGELTI 427
+L++LD G L MP G+GQLTCL+ LSMF V + I EL RLN + GEL I
Sbjct: 126 NLKYLD--ITGCEELRCMPAGMGQLTCLQKLSMFIV-GKHDGHNIGELNRLNFLGGELRI 182
Query: 428 KGLGHVCNQKDAERSN--DKKRIEKLNVWW 511
K L ++ +A +N KK ++ LN+ W
Sbjct: 183 KNLDNIQGLTEARDANLMGKKNLQSLNLSW 212
Score = 39.7 bits (91), Expect(2) = 2e-28
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +3
Query: 552 SREVLEGLHPHTNIQEFQIQRYPGVFLPSWLGTSRTLPKLISLSL 686
S EVL GL PH+N+++ I Y G+ P+W+ LP L+ +S+
Sbjct: 225 SEEVLCGLQPHSNLKQLCISGYQGIKFPNWM-MDLLLPNLVQISV 268
>ref|XP_003599404.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
gi|355488452|gb|AES69655.1| Cc-nbs-lrr resistance protein
[Medicago truncatula]
Length = 1247
Score = 130 bits (326), Expect = 3e-28
Identities = 75/164 (45%), Positives = 106/164 (64%), Gaps = 2/164 (1%)
Frame = +2
Query: 26 SLRTLQILVLSNNRKITMLPLSIGNLRHLRYLDLSETNITSLPESTCNLTNLQTLKLFRC 205
S + L++L LS IT LP SIGNL LRYLD+S TNI SLP++TC+L NLQTL L RC
Sbjct: 574 SQKRLRVLSLSRYTNITKLPDSIGNLVQLRYLDISFTNIKSLPDTTCSLYNLQTLILSRC 633
Query: 206 PNFKVFPKYLGNIRSLRHLDFFFHGGGVLTGMPVGIGQLTCLETLSMFAVCSSTECAGIQ 385
+ P ++GN+ SLRHLD G + +PV IG+L L+TL++F V GI+
Sbjct: 634 DSLTELPVHIGNLVSLRHLDI---SGTNINELPVEIGRLENLQTLTLFLVGKPHVGLGIK 690
Query: 386 ELERLNQIKGELTIKGLGHVCNQKDAERSN--DKKRIEKLNVWW 511
EL + ++G+LTIK L +V + ++A +N K++IE+L + W
Sbjct: 691 ELRKFPNLQGKLTIKNLDNVVDAREAHDANLKGKEKIEELELIW 734