BLASTX nr result

ID: Coptis23_contig00005500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005500
         (1110 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278062.2| PREDICTED: uncharacterized protein LOC100268...   142   2e-31
emb|CBI15540.3| unnamed protein product [Vitis vinifera]              142   2e-31
ref|XP_004134260.1| PREDICTED: uncharacterized protein LOC101216...   115   2e-23
ref|XP_002529556.1| transcription factor, putative [Ricinus comm...   110   6e-22
ref|XP_003530053.1| PREDICTED: uncharacterized protein LOC100818...    99   2e-18

>ref|XP_002278062.2| PREDICTED: uncharacterized protein LOC100268025 [Vitis vinifera]
          Length = 1070

 Score =  142 bits (357), Expect = 2e-31
 Identities = 68/131 (51%), Positives = 96/131 (73%)
 Frame = +2

Query: 5   HGHCWSKVAAAVPPRTDNQCRRRWKFLFPHELLMRQAARRVQKVALISNFVDREAERPAL 184
           HG+CWSKVAA +PPRTD+QCRRRWK LFPHE+ + QAAR++QKVALISNFVDRE+ERPAL
Sbjct: 578 HGYCWSKVAACIPPRTDSQCRRRWKVLFPHEVPLLQAARKIQKVALISNFVDRESERPAL 637

Query: 185 DPSDFLPLPGTNVITEAQNGENSRRKKNEGRKPSSKKQNDMAFRDDAVSKKKNVRKRHSK 364
            P DFLP+P  + ++E Q  ++ +RK+    +P ++ +N+ A R +   KK++ + R+  
Sbjct: 638 GPKDFLPVPEMDSVSEPQK-DSQKRKRKSKVQPETEGENNAASR-NVPKKKRSQKPRNGA 695

Query: 365 SSRHPEPPVSS 397
            +   E P +S
Sbjct: 696 ETSSKEVPGNS 706


>emb|CBI15540.3| unnamed protein product [Vitis vinifera]
          Length = 1318

 Score =  142 bits (357), Expect = 2e-31
 Identities = 68/131 (51%), Positives = 96/131 (73%)
 Frame = +2

Query: 5   HGHCWSKVAAAVPPRTDNQCRRRWKFLFPHELLMRQAARRVQKVALISNFVDREAERPAL 184
           HG+CWSKVAA +PPRTD+QCRRRWK LFPHE+ + QAAR++QKVALISNFVDRE+ERPAL
Sbjct: 578 HGYCWSKVAACIPPRTDSQCRRRWKVLFPHEVPLLQAARKIQKVALISNFVDRESERPAL 637

Query: 185 DPSDFLPLPGTNVITEAQNGENSRRKKNEGRKPSSKKQNDMAFRDDAVSKKKNVRKRHSK 364
            P DFLP+P  + ++E Q  ++ +RK+    +P ++ +N+ A R +   KK++ + R+  
Sbjct: 638 GPKDFLPVPEMDSVSEPQK-DSQKRKRKSKVQPETEGENNAASR-NVPKKKRSQKPRNGA 695

Query: 365 SSRHPEPPVSS 397
            +   E P +S
Sbjct: 696 ETSSKEVPGNS 706


>ref|XP_004134260.1| PREDICTED: uncharacterized protein LOC101216287 [Cucumis sativus]
          Length = 1013

 Score =  115 bits (288), Expect = 2e-23
 Identities = 58/117 (49%), Positives = 77/117 (65%)
 Frame = +2

Query: 5   HGHCWSKVAAAVPPRTDNQCRRRWKFLFPHELLMRQAARRVQKVALISNFVDREAERPAL 184
           HG+ W+KVAA VP RTDN+CRRRWK LFP E+ + Q AR++QK ALISNFVDRE ERPAL
Sbjct: 562 HGYSWAKVAACVPSRTDNECRRRWKKLFPDEVPLLQEARKIQKAALISNFVDRETERPAL 621

Query: 185 DPSDFLPLPGTNVITEAQNGENSRRKKNEGRKPSSKKQNDMAFRDDAVSKKKNVRKR 355
            P+DF P P T+ +    +G     K+N   +     +N+ +   DA  K+K+  +R
Sbjct: 622 GPADFRPRPNTDSLCNT-DGPIPAPKRNVKTRKMPVSRNEKSATGDAPKKRKSNYQR 677


>ref|XP_002529556.1| transcription factor, putative [Ricinus communis]
           gi|223530968|gb|EEF32825.1| transcription factor,
           putative [Ricinus communis]
          Length = 1029

 Score =  110 bits (275), Expect = 6e-22
 Identities = 52/98 (53%), Positives = 72/98 (73%)
 Frame = +2

Query: 8   GHCWSKVAAAVPPRTDNQCRRRWKFLFPHELLMRQAARRVQKVALISNFVDREAERPALD 187
           G+CW+KVA  + PRTD++C+RRWK LFPHE+ + QAARR QK A+ISNFVDRE+ERPAL 
Sbjct: 582 GYCWAKVAKFLSPRTDSECQRRWKVLFPHEVPLLQAARRTQKAAMISNFVDRESERPALG 641

Query: 188 PSDFLPLPGTNVITEAQNGENSRRKKNEGRKPSSKKQN 301
           P DF+P+P   +I  A   +++ + K   RK S+  ++
Sbjct: 642 PHDFVPVP---MIRSAPEPKDTNKLKKPKRKISNTSRS 676


>ref|XP_003530053.1| PREDICTED: uncharacterized protein LOC100818474 [Glycine max]
          Length = 941

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 55/148 (37%), Positives = 83/148 (56%), Gaps = 24/148 (16%)
 Frame = +2

Query: 5    HGHCWSKVAAAVPPRTDNQCRRRWKFLFPHELLMRQAARRVQKVALISNFVDREAERPAL 184
            HG+CWSK+A  VPPRTD+QCR+RWK L P  + + Q AR+ Q+  +  NFVDRE+ERPA+
Sbjct: 606  HGYCWSKIAEEVPPRTDSQCRKRWKVLCPEYVPLLQEARKKQRSIIGCNFVDRESERPAI 665

Query: 185  DPSDFLPLP---------GTNVITEAQNG----ENSRRKKNEGRKPSSKKQNDMAFRDDA 325
              +DFLPLP          +N+  +A++     + S++     R  + + Q+   + DD 
Sbjct: 666  TLNDFLPLPVPAPKSDVGASNLRKKAKSSNVPKKMSKKLAKRARLHTKEVQDTEVYSDDG 725

Query: 326  VS-----------KKKNVRKRHSKSSRH 376
            +             KK   KRH+K +R+
Sbjct: 726  IKTYGEVSACSNVPKKMRSKRHTKKTRN 753


Top