BLASTX nr result

ID: Coptis23_contig00005498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005498
         (836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276587.1| PREDICTED: uncharacterized protein LOC100244...   168   1e-39
emb|CAN80259.1| hypothetical protein VITISV_034223 [Vitis vinifera]   161   1e-37
ref|XP_003520698.1| PREDICTED: uncharacterized protein LOC100797...   137   2e-30
ref|XP_004149202.1| PREDICTED: uncharacterized protein LOC101204...   130   4e-28
ref|XP_002528759.1| conserved hypothetical protein [Ricinus comm...   129   6e-28

>ref|XP_002276587.1| PREDICTED: uncharacterized protein LOC100244210 [Vitis vinifera]
          Length = 320

 Score =  168 bits (426), Expect = 1e-39
 Identities = 106/288 (36%), Positives = 140/288 (48%), Gaps = 12/288 (4%)
 Frame = +2

Query: 2   SQVDQETPYFPPESYCVSKEDEYDWYDRNAVYERKGSTKGXXXXXXXXXXXXXXXXX--K 175
           + + +  P FPPES+ +SK+ E DW+DRNA YERK STKG                   +
Sbjct: 37  TDLPEVAPDFPPESFWLSKDAELDWFDRNAFYERKESTKGNSTSTNLNPNHNSHSNSSSQ 96

Query: 176 RYSINLKSKASIIGLPKPQKTCYLDRKSCNNKHPSNVRFFPKQRSRSANNNVPLTEPSSP 355
           R+S+NLKSKASIIGLPKPQK CY D K+  N   SN R F K+   +  + VP+ EPSSP
Sbjct: 97  RFSLNLKSKASIIGLPKPQKPCYTDAKTRRNCRASNTRLFLKRTEPTGKSAVPMAEPSSP 156

Query: 356 KVSCIGXXXXXXXXXXXXXXXXXT----KENSTIPP------LKRNKEKKLGLWRSFKDA 505
           KVSC+G                 +     E +T+         K  K KK G W++ K  
Sbjct: 157 KVSCMGRVRSKKDRSRRLRNRQRSIKSPAEMATVAAEAKMIRSKSGKHKKGGFWKNLKSI 216

Query: 506 LHLGRGRKTAAVDDQETVVKPLTIVKSEKCNVYVDESVTMSESTGLGGMKRFVSGRRSDS 685
              GR +    V +      P     +    ++  E    SE   LGG++RF SGRRSDS
Sbjct: 217 FRTGRAKPIKGVPEPPKQSSPRNSFTARAREMHTSE--PESEPPTLGGVQRFASGRRSDS 274

Query: 686 FGGCGLDFEMDDFDETPRGESSVLSRRGVGPVMEVKCSREWECVGPAS 829
           +     D E+D           +  RR + P  EV C R+W+  GPAS
Sbjct: 275 WID---DVEVDVAKSESLDRDFIWRRRAMAPPKEVDCGRDWQHAGPAS 319


>emb|CAN80259.1| hypothetical protein VITISV_034223 [Vitis vinifera]
          Length = 321

 Score =  161 bits (408), Expect = 1e-37
 Identities = 104/282 (36%), Positives = 136/282 (48%), Gaps = 13/282 (4%)
 Frame = +2

Query: 23  PYFPPESYCVSKEDEYDWYDRNAVYERKGSTKGXXXXXXXXXXXXXXXXX--KRYSINLK 196
           P FPPES+ +SK+ E DW+DRNA YERK STKG                   +R+S+NLK
Sbjct: 44  PDFPPESFWLSKDAELDWFDRNAFYERKESTKGNSTSTNLNPNHNSHSNSSSQRFSLNLK 103

Query: 197 SKASIIGLPKPQKTCYLDRKSCNNKHPSNVRFFPKQRSRSANNNVPLTEPSSPKVSCIGX 376
           SKASIIGLPKPQK CY D K   N   SN R F K+   +  + VP+ EPSSPKVSC+G 
Sbjct: 104 SKASIIGLPKPQKPCYTDAKXRRNCRASNTRLFLKRTEPTGKSAVPMAEPSSPKVSCMGR 163

Query: 377 XXXXXXXXXXXXXXXXTKEN----------STIPPLKRNKEKKLGLWRSFKDALHL-GRG 523
                           + ++          + +   K  K KK G W++ K      GR 
Sbjct: 164 VRSKKDRSRRLRNRQRSIKSPAEMATXAAEAKMIRSKSGKHKKGGFWKNLKSIFRTGGRA 223

Query: 524 RKTAAVDDQETVVKPLTIVKSEKCNVYVDESVTMSESTGLGGMKRFVSGRRSDSFGGCGL 703
           +    V +      P     +    ++  E    SE   LGG++RF SGRRSDS+     
Sbjct: 224 KPIKGVPEPPKQSSPRNSFTARAREMHTSE--PESEPPTLGGVQRFASGRRSDSWID--- 278

Query: 704 DFEMDDFDETPRGESSVLSRRGVGPVMEVKCSREWECVGPAS 829
           D E+D           +  RR + P  EV C R+W+  GPAS
Sbjct: 279 DVEVDVAKSESLDRDFIWRRRAMAPPKEVDCGRDWQHAGPAS 320


>ref|XP_003520698.1| PREDICTED: uncharacterized protein LOC100797951 [Glycine max]
          Length = 289

 Score =  137 bits (346), Expect = 2e-30
 Identities = 93/244 (38%), Positives = 120/244 (49%), Gaps = 21/244 (8%)
 Frame = +2

Query: 23  PYFPPESYCVSKEDEYDWYDRNAVYERKGSTKGXXXXXXXXXXXXXXXXXKRYSINLKSK 202
           P  PPES+ +S+++EYDW+DRNAVYERK STK                   R+S+N KSK
Sbjct: 39  PDSPPESFWLSRDEEYDWWDRNAVYERKESTKA--------SNNNSTNLNPRFSLNFKSK 90

Query: 203 AS-IIGLPKPQKTCYLDRKS-CNNKHPSNVRFFPKQRSRSANNNVPLTEPSSPKVSCIGX 376
           AS IIGLPKPQKT ++D K+  N+  PSN+R FPK+      +     EPSSPKVSC+G 
Sbjct: 91  ASTIIGLPKPQKTSFVDAKNRRNHNKPSNIRLFPKRSVSVGKSESGFVEPSSPKVSCMGR 150

Query: 377 XXXXXXXXXXXXXXXXTKENSTIPPLKRNKEKKLGLWRSFKDALHLGRGRKT------AA 538
                           +  N+          KK G + SF+     GR  K+        
Sbjct: 151 VRSKRDRNRKLRSSRKSSPNTDAKEKPNRNGKKYGFFESFRSIFRSGRKDKSDRKKTDLL 210

Query: 539 VDDQETVVKPLTIVKSEKC--------NVYVDE-----SVTMSESTGLGGMKRFVSGRRS 679
             D     K   I  S +          V ++E     SV+ SE  GLGGM RF SGRRS
Sbjct: 211 ATDSNIETKSGAINYSSRARHSTSSLNEVSLEEPVSRNSVSESEPPGLGGMMRFASGRRS 270

Query: 680 DSFG 691
           +S+G
Sbjct: 271 ESWG 274


>ref|XP_004149202.1| PREDICTED: uncharacterized protein LOC101204080 [Cucumis sativus]
           gi|449500898|ref|XP_004161224.1| PREDICTED:
           uncharacterized LOC101204080 [Cucumis sativus]
          Length = 287

 Score =  130 bits (327), Expect = 4e-28
 Identities = 85/235 (36%), Positives = 116/235 (49%), Gaps = 13/235 (5%)
 Frame = +2

Query: 23  PYFPPESYCVSKEDEYDWYDRNAVYERKGSTKGXXXXXXXXXXXXXXXXX--KRYSINLK 196
           P FPPES+ +SK+ E+DW ++NA YERK STKG                   +R+S+N K
Sbjct: 51  PDFPPESFWLSKDAEFDWLNQNAFYERKDSTKGSSNSTNLNPTVNPTSNSNSQRFSLNFK 110

Query: 197 SKASIIGLPKPQKTCYLDRKSCNNKHPSNVRFFPKQRSRSANNNVPLTEPSSPKVSCIGX 376
           SKASI+GLPK  KTC++D KS  N    N R FPKQ   S  ++  L EPSSPKVSC+G 
Sbjct: 111 SKASILGLPKLHKTCFVDSKSRRNAKSGNTRLFPKQSGSSEKSDSALVEPSSPKVSCMGR 170

Query: 377 XXXXXXXXXXXXXXXXTKENSTIPPLKRNKEKKLGLWRSFKDALHLGRGR---KTAAVDD 547
                           + E +        K+ + G   +F++     +     K  A D 
Sbjct: 171 VRSKRDRSRRWKNRRRSCEPAPPKEKPERKDTEPGFLCTFRNLFRCWKKTPVVKPTAPDS 230

Query: 548 QETVVKPLTIVKSEKCNVYVDESVTMS--------ESTGLGGMKRFVSGRRSDSF 688
            ++    L +  S+K  + +D     S        E  GLGG+KRF SGRRS S+
Sbjct: 231 GDS----LAMKASDKIALNIDALTAESRPRRSVEIEPPGLGGVKRFASGRRSGSW 281


>ref|XP_002528759.1| conserved hypothetical protein [Ricinus communis]
           gi|223531853|gb|EEF33671.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 291

 Score =  129 bits (325), Expect = 6e-28
 Identities = 86/237 (36%), Positives = 124/237 (52%), Gaps = 15/237 (6%)
 Frame = +2

Query: 23  PYFPPESYCVSKEDEYDWYDRNAVYERKGSTKGXXXXXXXXXXXXXXXXXKRYSINLKSK 202
           P FPPES+ +SK+ E+DW+DRNA  ERK STKG                 +R+S NLKSK
Sbjct: 55  PDFPPESFWLSKDAEHDWFDRNAFIERKDSTKGNSHSTNLNPNINPNSNSQRFS-NLKSK 113

Query: 203 ASIIGLPKPQKTCYLD-RKSCNNKHPSNVRFFPKQRSRSANNNVPLTEPSSPKVSCIGXX 379
            SIIGLPKPQK+C++D R+ C    P+N R FPK+    + ++  L EPSSPKVSC+G  
Sbjct: 114 PSIIGLPKPQKSCFVDARRHCK---PANTRLFPKRSGSVSKSDSSLIEPSSPKVSCMGRV 170

Query: 380 XXXXXXXXXXXXXXXT-KENSTIPPLKR-NKEKKLGLWRSFKDALHL--------GRGRK 529
                          + + N T    +R  ++++ G + SF+              +G+ 
Sbjct: 171 RSKKDRNRRLKNQQQSGRSNETGGKRERPERKQRSGFFASFRAIFRATKKGKDSSQKGKD 230

Query: 530 TAAVDDQETVVKPLTI----VKSEKCNVYVDESVTMSESTGLGGMKRFVSGRRSDSF 688
            +    ++T VK   I       E+    ++ +    E  GLGGMKRF SGR+S+S+
Sbjct: 231 ASQESSKKTTVKTSDIRDRLPMRERGASPIEPATGGIEPVGLGGMKRFASGRKSESW 287


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