BLASTX nr result

ID: Coptis23_contig00005496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005496
         (2266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266496.1| PREDICTED: uncharacterized protein LOC100250...   672   0.0  
ref|XP_002266530.2| PREDICTED: uncharacterized protein LOC100244...   662   0.0  
emb|CBI15294.3| unnamed protein product [Vitis vinifera]              653   0.0  
ref|XP_002511499.1| conserved hypothetical protein [Ricinus comm...   620   e-175
ref|XP_003617344.1| Nodulin-related protein [Medicago truncatula...   614   e-173

>ref|XP_002266496.1| PREDICTED: uncharacterized protein LOC100250053 [Vitis vinifera]
          Length = 537

 Score =  672 bits (1735), Expect = 0.0
 Identities = 340/549 (61%), Positives = 401/549 (73%)
 Frame = +3

Query: 87   SKWIATVASIWIQCTSGSSYAFGIYSPLLKSSQNYSQSTLDSIAVFKDIGANVGLFSGLL 266
            SKWIAT+ASIWIQC+SGS Y F I+S  LKSSQ Y QSTLD+++V KD+GA  G+ SG L
Sbjct: 6    SKWIATLASIWIQCSSGSLYTFSIFSSALKSSQGYDQSTLDTVSVVKDVGATAGVLSGFL 65

Query: 267  YTAVTTPSHNNNSRGASWLRRLGGGGPWVVILAGVIQCFTGYFMIWLTVTGLLPRQPVGV 446
            Y+AV  P H +    + +LR     GPWVVI  G IQCF GYF +WL+V G +PRQPV +
Sbjct: 66   YSAVAVP-HRSRRSSSCFLR-----GPWVVIAVGAIQCFAGYFFLWLSVAGAIPRQPVPL 119

Query: 447  VCLYMLLAAHAQTFFNTASVVTAVHNFPDYSGTVVGIMKGFLGLSGAILIQIYSAIFKDN 626
            +CL+M L AHAQTFFNTA+VVTAVHNFPD+SGTVVGIMKGFLGLSGAILIQ+Y AIFK N
Sbjct: 120  MCLFMFLTAHAQTFFNTANVVTAVHNFPDFSGTVVGIMKGFLGLSGAILIQLYQAIFKGN 179

Query: 627  XXXXXXXXXXXXXXXXXXXXXXVRVHHKNGGDDKKHLNRFSVIALIIAAYLMVLIIVENV 806
                                  VR+++   GD+KKHLN FS++AL++A YLM LII+EN+
Sbjct: 180  PASYLLMLMLVTTVNPLLLMCLVRIYNTKEGDEKKHLNGFSLVALVVAGYLMALIILENI 239

Query: 807  MTLGVLEHSFALAVLFFLLISPVGIATRAHSRDSQISSPVSSLEVTQLLDDPDQLEAERI 986
            +TL      F L +L  LL  P+ +  +A   +   +S    +E  QL+DDP QL+AE+I
Sbjct: 240  LTLQFPARLFTLVLLLLLLAMPLAVTIKAQQSNFDGTSQTFLIEKNQLIDDPKQLDAEKI 299

Query: 987  YGRHDPTTCHDANQELHTHDKRILARGENLNLLQAMRTADFWFLFLPMACGMGSGLATVN 1166
                DP   H                GENLNLLQAM T +FW LFL MACGMGSGLATVN
Sbjct: 300  GKGQDPAGYH---------------LGENLNLLQAMGTCNFWCLFLAMACGMGSGLATVN 344

Query: 1167 NISQIGGSLGYTSVEISTLVSLWSIWNFLGRFGAGYLSDYFLHSRGWARPLIMAITLATM 1346
            NI QIGG+ GY S E STLVSLWSIWNFLGRFG GY+SDYFLH+RGWARP+ M ITLATM
Sbjct: 345  NIGQIGGAFGYKSFETSTLVSLWSIWNFLGRFGTGYVSDYFLHTRGWARPVFMVITLATM 404

Query: 1347 SIGHAVIASGLPGALYAGSIVVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTIAIASPIG 1526
            SIGH VIASG+PGALYAGS++VGV YGSQWSLMPTITSEIFGV+H+GTIFNTI +ASP+G
Sbjct: 405  SIGHFVIASGMPGALYAGSVLVGVSYGSQWSLMPTITSEIFGVQHLGTIFNTITMASPVG 464

Query: 1527 SYILSVRVVGYIYDKEALSDSGNICKGAHCFLLSFLIMASVTLFGSLIALGLFFRTQRFY 1706
            SYI SVRVVGYIYDKEA +D GN C G HCF++SFLIMAS TL G  +AL LF RT+ FY
Sbjct: 465  SYIFSVRVVGYIYDKEASAD-GNKCTGTHCFMVSFLIMASATLLGCFVALILFLRTKSFY 523

Query: 1707 KQVIFERIQ 1733
             QV+  R+Q
Sbjct: 524  NQVVLRRLQ 532


>ref|XP_002266530.2| PREDICTED: uncharacterized protein LOC100244916 [Vitis vinifera]
          Length = 559

 Score =  662 bits (1709), Expect = 0.0
 Identities = 339/558 (60%), Positives = 415/558 (74%), Gaps = 5/558 (0%)
 Frame = +3

Query: 78   MESSKWIATVASIWIQCTSGSSYAFGIYSPLLKSSQNYSQSTLDSIAVFKDIGANVGLFS 257
            M SSKWI TVASIWIQCT G SYAFG+YS +LKSSQ+Y Q+TLD+++VFKDIGAN G+ S
Sbjct: 1    MLSSKWITTVASIWIQCTCGGSYAFGVYSSVLKSSQSYDQATLDTVSVFKDIGANAGVLS 60

Query: 258  GLLYTAVTTPSHN---NNSRGASWLRRLGGGGPWVVILAGVIQCFTGYFMIWLTVTGLLP 428
            GLLY+AV         ++ + +S    L  GGPWVV +AG IQCF GYF+IWL+VTG++ 
Sbjct: 61   GLLYSAVAVHRRRRRRDSHQASSVSYLLSFGGPWVVHVAGAIQCFAGYFLIWLSVTGVIH 120

Query: 429  RQPVGVVCLYMLLAAHAQTFFNTASVVTAVHNFPDYSGTVVGIMKGFLGLSGAILIQIYS 608
            R  V ++CL+M +AAHAQTFFNTA+VVTAV NFPDY GT+VGIMKGFLGLSGA+LIQ+Y 
Sbjct: 121  RPAVPLMCLFMFIAAHAQTFFNTANVVTAVQNFPDYGGTIVGIMKGFLGLSGAVLIQVYD 180

Query: 609  AIFKDNXXXXXXXXXXXXXXXXXXXXXXVRVHHKNGGDDKKHLNRFSVIALIIAAYLMVL 788
            A+F+ N                      VR+  ++   +KK LNRFS +AL++AAYLM++
Sbjct: 181  ALFEGNPSIFILMLALLPTFISLLLMCLVRIDERDTQGNKKQLNRFSTVALLVAAYLMIV 240

Query: 789  IIVENVMTLGVLEHSFALAVLFFLLISPVGIATRAHSRDSQISSP-VSSLEVTQLLDDPD 965
            II+EN+ T  +      L +L  LL SP+GIA  A   +S+ISS  + S E + LL D  
Sbjct: 241  IILENIFTFPLWARIATLILLLLLLASPLGIAANALKDESEISSQGLVSSERSPLLSDNG 300

Query: 966  QLEAER-IYGRHDPTTCHDANQELHTHDKRILARGENLNLLQAMRTADFWFLFLPMACGM 1142
             L++ER      DP   H A++     D  +L   E+LN++QAMRT +FW LF+ MACGM
Sbjct: 301  SLQSERWSSAAGDPKEHHAADE-----DTPMLQDEEDLNVVQAMRTGNFWLLFIAMACGM 355

Query: 1143 GSGLATVNNISQIGGSLGYTSVEISTLVSLWSIWNFLGRFGAGYLSDYFLHSRGWARPLI 1322
            GSGLAT+NNISQIG SLGYT+VEI+TLVSLWSIWNFLGRFGAGY+SD  LH RGWARPL+
Sbjct: 356  GSGLATINNISQIGESLGYTTVEINTLVSLWSIWNFLGRFGAGYVSDILLHRRGWARPLL 415

Query: 1323 MAITLATMSIGHAVIASGLPGALYAGSIVVGVCYGSQWSLMPTITSEIFGVRHMGTIFNT 1502
            M ITLATM+IGH +IASG  G LY GS++VGVCYGSQWSLMPTITSE+FGV HMGTIFNT
Sbjct: 416  MVITLATMTIGHVIIASGFAGNLYVGSVIVGVCYGSQWSLMPTITSELFGVGHMGTIFNT 475

Query: 1503 IAIASPIGSYILSVRVVGYIYDKEALSDSGNICKGAHCFLLSFLIMASVTLFGSLIALGL 1682
            IAIASP+GSY+LSVRV+GYIYDKEA S   N C G HCF+LSFLI+  VTLFGSL+A  L
Sbjct: 476  IAIASPVGSYLLSVRVIGYIYDKEA-SGKQNSCSGTHCFMLSFLIIGCVTLFGSLVASAL 534

Query: 1683 FFRTQRFYKQVIFERIQI 1736
            FFRT+RFYK V+  R+ +
Sbjct: 535  FFRTKRFYKLVVLRRLNL 552


>emb|CBI15294.3| unnamed protein product [Vitis vinifera]
          Length = 612

 Score =  653 bits (1685), Expect = 0.0
 Identities = 335/554 (60%), Positives = 407/554 (73%), Gaps = 1/554 (0%)
 Frame = +3

Query: 78   MESSKWIATVASIWIQCTSGSSYAFGIYSPLLKSSQNYSQSTLDSIAVFKDIGANVGLFS 257
            M SSKWI TVASIWIQCT G SYAFG+YS +LKSSQ+Y Q+TLD+++VFKDIGAN G+ S
Sbjct: 1    MLSSKWITTVASIWIQCTCGGSYAFGVYSSVLKSSQSYDQATLDTVSVFKDIGANAGVLS 60

Query: 258  GLLYTAVTTPSHNNNSRGASWLRRLGGGGPWVVILAGVIQCFTGYFMIWLTVTGLLPRQP 437
            GLLY+A ++ S+            L  GGPWVV +AG IQCF GYF+IWL+VTG++ R  
Sbjct: 61   GLLYSAASSVSY-----------LLSFGGPWVVHVAGAIQCFAGYFLIWLSVTGVIHRPA 109

Query: 438  VGVVCLYMLLAAHAQTFFNTASVVTAVHNFPDYSGTVVGIMKGFLGLSGAILIQIYSAIF 617
            V ++CL+M +AAHAQTFFNTA+VVTAV NFPDY GT+VGIMKGFLGLSGA+LIQ+Y A+F
Sbjct: 110  VPLMCLFMFIAAHAQTFFNTANVVTAVQNFPDYGGTIVGIMKGFLGLSGAVLIQVYDALF 169

Query: 618  KDNXXXXXXXXXXXXXXXXXXXXXXVRVHHKNGGDDKKHLNRFSVIALIIAAYLMVLIIV 797
            + N                      VR+  ++   +KK LNRFS +AL++AAYLM++II+
Sbjct: 170  EGNPSIFILMLALLPTFISLLLMCLVRIDERDTQGNKKQLNRFSTVALLVAAYLMIVIIL 229

Query: 798  ENVMTLGVLEHSFALAVLFFLLISPVGIATRAHSRDSQISSP-VSSLEVTQLLDDPDQLE 974
            EN+ T  +      L +L  LL SP+GIA  A   +S+ISS  + S E + LL DP +  
Sbjct: 230  ENIFTFPLWARIATLILLLLLLASPLGIAANALKDESEISSQGLVSSERSPLLRDPKE-- 287

Query: 975  AERIYGRHDPTTCHDANQELHTHDKRILARGENLNLLQAMRTADFWFLFLPMACGMGSGL 1154
                         H A  E    D  +L   E+LN++QAMRT +FW LF+ MACGMGSGL
Sbjct: 288  -------------HHAADE----DTPMLQDEEDLNVVQAMRTGNFWLLFIAMACGMGSGL 330

Query: 1155 ATVNNISQIGGSLGYTSVEISTLVSLWSIWNFLGRFGAGYLSDYFLHSRGWARPLIMAIT 1334
            AT+NNISQIG SLGYT+VEI+TLVSLWSIWNFLGRFGAGY+SD  LH RGWARPL+M IT
Sbjct: 331  ATINNISQIGESLGYTTVEINTLVSLWSIWNFLGRFGAGYVSDILLHRRGWARPLLMVIT 390

Query: 1335 LATMSIGHAVIASGLPGALYAGSIVVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTIAIA 1514
            LATM+IGH +IASG  G LY GS++VGVCYGSQWSLMPTITSE+FGV HMGTIFNTIAIA
Sbjct: 391  LATMTIGHVIIASGFAGNLYVGSVIVGVCYGSQWSLMPTITSELFGVGHMGTIFNTIAIA 450

Query: 1515 SPIGSYILSVRVVGYIYDKEALSDSGNICKGAHCFLLSFLIMASVTLFGSLIALGLFFRT 1694
            SP+GSY+LSVRV+GYIYDKEA S   N C G HCF+LSFLI+  VTLFGSL+A  LFFRT
Sbjct: 451  SPVGSYLLSVRVIGYIYDKEA-SGKQNSCSGTHCFMLSFLIIGCVTLFGSLVASALFFRT 509

Query: 1695 QRFYKQVIFERIQI 1736
            +RFYK V+  R+ +
Sbjct: 510  KRFYKLVVLRRLNL 523


>ref|XP_002511499.1| conserved hypothetical protein [Ricinus communis]
            gi|223550614|gb|EEF52101.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 535

 Score =  620 bits (1599), Expect = e-175
 Identities = 324/550 (58%), Positives = 386/550 (70%), Gaps = 2/550 (0%)
 Frame = +3

Query: 87   SKWIATVASIWIQCTSGSSYAFGIYSPLLKSSQNYSQSTLDSIAVFKDIGANVGLFSGLL 266
            +K  +TVASIWIQCTSGS Y F +YSP LKS+QNY QSTL++++VFKDIGAN G+ SG+L
Sbjct: 8    TKLFSTVASIWIQCTSGSLYTFSVYSPALKSTQNYDQSTLETVSVFKDIGANCGVLSGVL 67

Query: 267  YTAVTTPSHNNNSRGASWLRRLGGGGPWVVILAGVIQCFTGYFMIWLTVTGLLPRQPVGV 446
            YT  TT  H    R  S        GPW+V+L G IQCF GYF++W  V GL+PR PV  
Sbjct: 68   YTKATTRHHRRRGRYES------ASGPWLVLLVGAIQCFIGYFLMWAAVAGLIPRPPVVA 121

Query: 447  VCLYMLLAAHAQTFFNTASVVTAVHNFPDYSGTVVGIMKGFLGLSGAILIQIYSAIFKDN 626
            +CL+M +AAHAQ+FFNTA VVT+V NFP YSGT VGIMKGFLGLSGAILIQ+Y  +F + 
Sbjct: 122  MCLFMFVAAHAQSFFNTADVVTSVKNFPSYSGTAVGIMKGFLGLSGAILIQVYQTMFNNK 181

Query: 627  XXXXXXXXXXXXXXXXXXXXXXVRVHHKNGGDDKKHLNRFSVIALIIAAYLMVLIIVENV 806
                                  VR++  + GD+KK+L+ FSVIAL +AAYLM++II+E+V
Sbjct: 182  PTLYLLMLSLLSSINPVILMWFVRIYTVSEGDEKKYLDSFSVIALFLAAYLMIIIILEHV 241

Query: 807  MTLGVLEHSFALAVLFFLLISPVGIATRAHSRDSQISSPVSSLEVTQLLDDPDQLEAERI 986
             +        A  +L  LL+SP+ +A +   ++S I S     E  QL+D+         
Sbjct: 242  FSFQFTVRIIAFVLLMMLLMSPLFVAIKVPEKESDIVS-----ERNQLVDESK------- 289

Query: 987  YGRHDPT--TCHDANQELHTHDKRILARGENLNLLQAMRTADFWFLFLPMACGMGSGLAT 1160
              R DP       +N E   HD  +  +    NL QA RT DFW LFL MACGMGSGLAT
Sbjct: 290  --RDDPAGYISLPSNPE---HDNGVYEK----NLFQAARTVDFWILFLAMACGMGSGLAT 340

Query: 1161 VNNISQIGGSLGYTSVEISTLVSLWSIWNFLGRFGAGYLSDYFLHSRGWARPLIMAITLA 1340
            VNN+SQ+G SLGY S+E +TLVSLWSIWNFLGRFGAGY+SDYFLHSRGWARPL MAITLA
Sbjct: 341  VNNMSQVGESLGYASLETNTLVSLWSIWNFLGRFGAGYISDYFLHSRGWARPLFMAITLA 400

Query: 1341 TMSIGHAVIASGLPGALYAGSIVVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTIAIASP 1520
             M+IGH VIASGLPGALYAGS++VGVCYGSQWSLMPTI+SEIFGV HMGTIFN I IASP
Sbjct: 401  GMTIGHVVIASGLPGALYAGSLLVGVCYGSQWSLMPTISSEIFGVGHMGTIFNAITIASP 460

Query: 1521 IGSYILSVRVVGYIYDKEALSDSGNICKGAHCFLLSFLIMASVTLFGSLIALGLFFRTQR 1700
            +GSYI SVRVVGYIYDKEA S  G  C G HCF+ SFL+MAS T  GSL AL L  RT+ 
Sbjct: 461  VGSYIFSVRVVGYIYDKEA-SGEGTACVGTHCFMSSFLVMASATFLGSLAALALSLRTKT 519

Query: 1701 FYKQVIFERI 1730
            FY +VI  R+
Sbjct: 520  FYNRVILGRL 529


>ref|XP_003617344.1| Nodulin-related protein [Medicago truncatula]
            gi|355518679|gb|AET00303.1| Nodulin-related protein
            [Medicago truncatula]
          Length = 535

 Score =  614 bits (1584), Expect = e-173
 Identities = 315/554 (56%), Positives = 391/554 (70%), Gaps = 2/554 (0%)
 Frame = +3

Query: 78   MESSKWIATVASIWIQCTSGSSYAFGIYSPLLKSSQNYSQSTLDSIAVFKDIGANVGLFS 257
            ++ SKW++TVASIWIQCTSGS Y F IYS  LKS+Q+Y QSTLD ++V KDIGAN+G+ S
Sbjct: 7    LKYSKWVSTVASIWIQCTSGSLYTFSIYSQTLKSTQHYDQSTLDIVSVSKDIGANIGVLS 66

Query: 258  GLLYTAVTTPSHNNNSRGASWLRRLGGGGPWVVILAGVIQCFTGYFMIWLTVTGLLPRQP 437
            GL+Y  + T +                 GPWVV L G  QCF GYF++W  V+G+LP  P
Sbjct: 67   GLIYDFLATRTRT---------------GPWVVHLFGSAQCFLGYFLMWAAVSGVLPPVP 111

Query: 438  VGVVCLYMLLAAHAQTFFNTASVVTAVHNFPDYSGTVVGIMKGFLGLSGAILIQIYSAIF 617
            V V+CL+M +AAHAQ++FNT++VVT V NFP+Y GT+VGI+KGFLGLSGAILIQ+Y  +F
Sbjct: 112  VPVMCLFMFVAAHAQSYFNTSNVVTGVRNFPNYGGTIVGILKGFLGLSGAILIQVYRTVF 171

Query: 618  KDNXXXXXXXXXXXXXXXXXXXXXXVRVHH--KNGGDDKKHLNRFSVIALIIAAYLMVLI 791
             +N                      VR+H+  + G  +KK+LN FS++AL+IAAYLM++I
Sbjct: 172  NNNPMSYLLMLSLLPPINTLILMWFVRIHNTRREGESEKKYLNIFSLMALVIAAYLMIVI 231

Query: 792  IVENVMTLGVLEHSFALAVLFFLLISPVGIATRAHSRDSQISSPVSSLEVTQLLDDPDQL 971
            I+EN++TL +    F   VL  LL S + IA +AH ++S  S+  S L            
Sbjct: 232  ILENILTLQLSIRIFTFIVLMVLLASLLCIAFKAHEKNSSNSASKSFLA----------- 280

Query: 972  EAERIYGRHDPTTCHDANQELHTHDKRILARGENLNLLQAMRTADFWFLFLPMACGMGSG 1151
            E   +  R D +  ++      T+ +R L +G NLNL QA++T +FW LF+ MACGMGSG
Sbjct: 281  EGSNLIAREDSS--NNLLPADDTNSQRTLQQGGNLNLFQAVKTLNFWILFVSMACGMGSG 338

Query: 1152 LATVNNISQIGGSLGYTSVEISTLVSLWSIWNFLGRFGAGYLSDYFLHSRGWARPLIMAI 1331
            LATVNN+SQIG SLGY+++E  +LV+LWSIWNFLGRFGAGY+SDYFLH+RGWARP  M I
Sbjct: 339  LATVNNMSQIGESLGYSTLETGSLVALWSIWNFLGRFGAGYVSDYFLHTRGWARPFFMVI 398

Query: 1332 TLATMSIGHAVIASGLPGALYAGSIVVGVCYGSQWSLMPTITSEIFGVRHMGTIFNTIAI 1511
            TL TMSIGH VIA GLPGALY GSI+VG+CYGSQWSLMPTITSEIFGV HMG+IFNTI I
Sbjct: 399  TLMTMSIGHVVIAYGLPGALYVGSILVGICYGSQWSLMPTITSEIFGVGHMGSIFNTITI 458

Query: 1512 ASPIGSYILSVRVVGYIYDKEALSDSGNICKGAHCFLLSFLIMASVTLFGSLIALGLFFR 1691
            ASP+GSYI SVRV+GYIYDKEA    GN C G HCF  SFLIMAS  + GSL AL LF R
Sbjct: 459  ASPVGSYIFSVRVLGYIYDKEASGTEGNKCAGTHCFKFSFLIMASAAILGSLTALCLFLR 518

Query: 1692 TQRFYKQVIFERIQ 1733
            T+ FY QV+  RIQ
Sbjct: 519  TRHFYGQVVLRRIQ 532


Top