BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005485
         (997 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 ...   105   2e-43
ref|XP_002307356.1| predicted protein [Populus trichocarpa] gi|2...    91   3e-28
ref|XP_004136427.1| PREDICTED: RING-H2 finger protein ATL11-like...    77   1e-22
gb|AAO45753.1| RING/c3HC4/PHD zinc finger-like protein [Cucumis ...   105   1e-20
ref|XP_002512343.1| ring finger protein, putative [Ricinus commu...   102   1e-19

>ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 isoform 1 [Vitis
           vinifera] gi|147843962|emb|CAN83712.1| hypothetical
           protein VITISV_011102 [Vitis vinifera]
          Length = 420

 Score =  105 bits (262), Expect(2) = 2e-43
 Identities = 54/76 (71%), Positives = 60/76 (78%)
 Frame = -1

Query: 646 PDVINPLQIPFQNRPGRSGSRRPQISGKFPRSHSTGHSLIQPGENMERFTLRLPEDIRKK 467
           PDVINP Q   QNRP RS S RP+   KFPRSHSTGHSLIQPGEN ERFTL+LPED+RK+
Sbjct: 242 PDVINPNQSLHQNRPPRSKSTRPR---KFPRSHSTGHSLIQPGENCERFTLKLPEDVRKQ 298

Query: 466 IVNGKLNRTTSLVSFP 419
           I+   LNRTTSL+  P
Sbjct: 299 IMKRALNRTTSLLVLP 314



 Score = 97.8 bits (242), Expect(2) = 2e-43
 Identities = 47/83 (56%), Positives = 57/83 (68%)
 Frame = -2

Query: 996 EFEDDETLRLLPKCDHVFHPECIDAWLASHTTCPVCRANLTPDSNHPAADGNEVTEAQNQ 817
           EFED+ETLRL+PKCDHVFHPECIDAWLASH TCPVCRANLT  +     D +   EA   
Sbjct: 149 EFEDNETLRLIPKCDHVFHPECIDAWLASHVTCPVCRANLTEPA--VPTDYSAAVEAAES 206

Query: 816 DSESDSDIENQSHHSITLQQASM 748
             ESD D E++      +++ S+
Sbjct: 207 AGESDHDGEDRRSEINAVREVSI 229


>ref|XP_002307356.1| predicted protein [Populus trichocarpa] gi|222856805|gb|EEE94352.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score = 90.5 bits (223), Expect(2) = 3e-28
 Identities = 46/106 (43%), Positives = 64/106 (60%), Gaps = 12/106 (11%)
 Frame = -2

Query: 996 EFEDDETLRLLPKCDHVFHPECIDAWLASHTTCPVCRANLTPDSN-------HPAADGNE 838
           EFEDD+TLRL+PKC HVFHP+CIDAWL SH TCPVCRANL P          H     N+
Sbjct: 149 EFEDDQTLRLIPKCSHVFHPDCIDAWLTSHVTCPVCRANLVPKPGDLPFNPVHVDDPKND 208

Query: 837 VTEAQNQDS---ESDSDIENQSHHSITLQ--QASMYNLNLHNLSPI 715
           + E  + D+   E+ ++++    + IT +  Q    + N++  SP+
Sbjct: 209 LVEPDSHDNVPDETQNEVQIHIRNEITREGRQQITRSPNMNLSSPV 254



 Score = 62.0 bits (149), Expect(2) = 3e-28
 Identities = 31/64 (48%), Positives = 44/64 (68%)
 Frame = -1

Query: 613 QNRPGRSGSRRPQISGKFPRSHSTGHSLIQPGENMERFTLRLPEDIRKKIVNGKLNRTTS 434
           QNRP +S S   +++    RS+S  +SLIQ  EN ERFTLRLP+++  +++N +LNRT S
Sbjct: 256 QNRPLQSWSTGWRLNALISRSNSINNSLIQSEENRERFTLRLPQEVHNQLINSRLNRTKS 315

Query: 433 LVSF 422
             SF
Sbjct: 316 CGSF 319


>ref|XP_004136427.1| PREDICTED: RING-H2 finger protein ATL11-like [Cucumis sativus]
           gi|449532382|ref|XP_004173160.1| PREDICTED: RING-H2
           finger protein ATL11-like [Cucumis sativus]
          Length = 367

 Score = 77.4 bits (189), Expect(2) = 1e-22
 Identities = 43/105 (40%), Positives = 59/105 (56%), Gaps = 11/105 (10%)
 Frame = -2

Query: 996 EFEDDETLRLLPKCDHVFHPECIDAWLASHTTCPVCRANLTPDS--------NHPAADGN 841
           EFE+ + LRL+PKC HVFH  C+DAWL SH+TCPVCRANL P          N   + G+
Sbjct: 138 EFENSDMLRLIPKCSHVFHSGCVDAWLISHSTCPVCRANLCPKPGEVTLSIFNFDPSTGS 197

Query: 840 EVTEAQNQDSESDSDIENQSHHSITL---QQASMYNLNLHNLSPI 715
           E    +   + S S   N  H +I +   ++A+    N+ N SP+
Sbjct: 198 ERIGLEQSPTPSPSPPPN--HVTIPVVEDRRAATETTNVTNPSPV 240



 Score = 56.2 bits (134), Expect(2) = 1e-22
 Identities = 33/75 (44%), Positives = 43/75 (57%)
 Frame = -1

Query: 643 DVINPLQIPFQNRPGRSGSRRPQISGKFPRSHSTGHSLIQPGENMERFTLRLPEDIRKKI 464
           +V NP  +   + P RS S   ++S  F RS+STGH         ERFTLRLPE +R ++
Sbjct: 233 NVTNPSPVANWSTPTRSRSLGWRLSEIFQRSNSTGH---------ERFTLRLPEAVRSQL 283

Query: 463 VNGKLNRTTSLVSFP 419
           +N  LNRT SL   P
Sbjct: 284 LNSTLNRTRSLAELP 298


>gb|AAO45753.1| RING/c3HC4/PHD zinc finger-like protein [Cucumis melo subsp. melo]
          Length = 379

 Score =  105 bits (263), Expect = 1e-20
 Identities = 53/80 (66%), Positives = 61/80 (76%), Gaps = 3/80 (3%)
 Frame = -2

Query: 996 EFEDDETLRLLPKCDHVFHPECIDAWLASHTTCPVCRANLTP---DSNHPAADGNEVTEA 826
           EFEDDETLRL+PKCDHVFHPECIDAWLASH+TCPVCRANL+P   DS H A D N V   
Sbjct: 130 EFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQPTDSVHRADDSNAVV-- 187

Query: 825 QNQDSESDSDIENQSHHSIT 766
            N D++   DIE QS+  ++
Sbjct: 188 -NSDTDG-GDIEAQSNDVVS 205



 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 39/61 (63%), Positives = 48/61 (78%)
 Frame = -1

Query: 610 NRPGRSGSRRPQISGKFPRSHSTGHSLIQPGENMERFTLRLPEDIRKKIVNGKLNRTTSL 431
           NR    GSR  ++   FPRSHSTGHSL+QPGE+ ERFTLRLP +IRK++VN KL+R TS+
Sbjct: 231 NRTRTRGSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLHRATSM 290

Query: 430 V 428
           V
Sbjct: 291 V 291


>ref|XP_002512343.1| ring finger protein, putative [Ricinus communis]
           gi|223548304|gb|EEF49795.1| ring finger protein,
           putative [Ricinus communis]
          Length = 380

 Score =  102 bits (254), Expect = 1e-19
 Identities = 48/72 (66%), Positives = 56/72 (77%)
 Frame = -2

Query: 996 EFEDDETLRLLPKCDHVFHPECIDAWLASHTTCPVCRANLTPDSNHPAADGNEVTEAQNQ 817
           EFEDDETLRLLPKCDHVFHP+CIDAWLASHTTCPVCR+NLTP    P     + TE+   
Sbjct: 129 EFEDDETLRLLPKCDHVFHPDCIDAWLASHTTCPVCRSNLTP---QPVDPPTQTTESL-P 184

Query: 816 DSESDSDIENQS 781
           DS SD + +N++
Sbjct: 185 DSSSDLEAQNEA 196



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 45/75 (60%), Positives = 56/75 (74%)
 Frame = -1

Query: 646 PDVINPLQIPFQNRPGRSGSRRPQISGKFPRSHSTGHSLIQPGENMERFTLRLPEDIRKK 467
           P+V++  Q   +NR   S S RP    KFPRSHSTGHSLIQPGEN +RFTLRLP ++RK+
Sbjct: 218 PEVMSVNQTLNRNRTRGSRSGRPS---KFPRSHSTGHSLIQPGENTDRFTLRLPVEVRKQ 274

Query: 466 IVNGKLNRTTSLVSF 422
           I+N +LNRT S+V F
Sbjct: 275 IMNRELNRTMSMVVF 289