BLASTX nr result

ID: Coptis23_contig00005476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005476
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAQ58595.1| unknown protein [Vitis vinifera]                      206   2e-51
ref|XP_003617467.1| hypothetical protein MTR_5g091900 [Medicago ...   203   1e-50
emb|CAQ58602.1| unknown gene [Vitis vinifera]                         195   5e-48
ref|XP_002305896.1| predicted protein [Populus trichocarpa] gi|2...   194   1e-47
ref|XP_002528501.1| conserved hypothetical protein [Ricinus comm...   189   3e-46

>emb|CAQ58595.1| unknown protein [Vitis vinifera]
          Length = 220

 Score =  206 bits (524), Expect = 2e-51
 Identities = 105/175 (60%), Positives = 127/175 (72%)
 Frame = +1

Query: 37  SLYGVLERIFRAILSPEDDEKTSLFVRIKKSFYQNLPLIPEASRNSTRNLLIWTRQGTAL 216
           +LY VL R+  AI  P+     SL  R+K S   N+PL+ +AS+N+ RN++ WTR+G+AL
Sbjct: 24  TLYHVLHRLMAAIFFPDPTSSASLLRRVKISVADNVPLLRQASKNTARNVMHWTRRGSAL 83

Query: 217 RALLVISIGTIVLLALSGLLVFMVFFVAATVNXXXXXXXXXXXXXGGCLAIFFTCMTAIY 396
           RALL IS+GTI LLAL+GLLVFM+FF+AAT N             GG LA+FF C+TAIY
Sbjct: 84  RALLAISVGTITLLALTGLLVFMLFFLAATFNAIVISLLMSLAAAGGFLALFFACITAIY 143

Query: 397 IGALSVAVFVISSATITTIFAVLIATGWIGFFWTVWIATKKGMSLAKHSLSMTGS 561
           IGALSVAV VIS+ATI+ I AVLI TGWIGFFWTVW+ TKK    AKHSL MTGS
Sbjct: 144 IGALSVAVVVISTATISAIIAVLITTGWIGFFWTVWLVTKKSAGFAKHSLGMTGS 198


>ref|XP_003617467.1| hypothetical protein MTR_5g091900 [Medicago truncatula]
           gi|355518802|gb|AET00426.1| hypothetical protein
           MTR_5g091900 [Medicago truncatula]
           gi|388503112|gb|AFK39622.1| unknown [Medicago
           truncatula]
          Length = 232

 Score =  203 bits (517), Expect = 1e-50
 Identities = 103/182 (56%), Positives = 130/182 (71%)
 Frame = +1

Query: 16  NNKDVEESLYGVLERIFRAILSPEDDEKTSLFVRIKKSFYQNLPLIPEASRNSTRNLLIW 195
           N K V+++L  VL R+   IL P+  + TSL  RIK S   N PLIPEASRNS  ++L+W
Sbjct: 31  NTKPVKQTLPEVLNRLASTILFPDPADGTSLLRRIKNSVADNAPLIPEASRNSANDVLVW 90

Query: 196 TRQGTALRALLVISIGTIVLLALSGLLVFMVFFVAATVNXXXXXXXXXXXXXGGCLAIFF 375
           TR+G+ LRALLVIS+GT+  ++LSGLLVFM+FF+ ATVN             GG LAIFF
Sbjct: 91  TRRGSPLRALLVISVGTVAFVSLSGLLVFMLFFLTATVNAIVISLLISLAAAGGFLAIFF 150

Query: 376 TCMTAIYIGALSVAVFVISSATITTIFAVLIATGWIGFFWTVWIATKKGMSLAKHSLSMT 555
            C T+IYIGALS+A+FVIS  T  TI A+LI +GWIGFF+TVW+ T+K    AKHSLS+T
Sbjct: 151 ACATSIYIGALSIAIFVISVTTFWTIVAILITSGWIGFFYTVWLITRKSFGFAKHSLSVT 210

Query: 556 GS 561
           G+
Sbjct: 211 GA 212


>emb|CAQ58602.1| unknown gene [Vitis vinifera]
          Length = 217

 Score =  195 bits (495), Expect = 5e-48
 Identities = 102/175 (58%), Positives = 123/175 (70%)
 Frame = +1

Query: 37  SLYGVLERIFRAILSPEDDEKTSLFVRIKKSFYQNLPLIPEASRNSTRNLLIWTRQGTAL 216
           +LY VL R+  AI  P+      L  R+K S   N+PL+ +AS+N+ RN++ WTR+G   
Sbjct: 24  TLYHVLHRLMAAIFFPDPTSSAPLLRRVKISVADNVPLLRQASKNTARNVVHWTRRG--- 80

Query: 217 RALLVISIGTIVLLALSGLLVFMVFFVAATVNXXXXXXXXXXXXXGGCLAIFFTCMTAIY 396
           RALLVIS+GTI LLAL+GLLVFM+FF+AAT N             GG LA+FF C+TAIY
Sbjct: 81  RALLVISVGTITLLALTGLLVFMLFFLAATFNAIVISLLMSLAAAGGFLALFFACITAIY 140

Query: 397 IGALSVAVFVISSATITTIFAVLIATGWIGFFWTVWIATKKGMSLAKHSLSMTGS 561
           IGALSVAV VIS+ATI+ I A LI TGWIGFFWTVW+ TKK    AKHSL MTGS
Sbjct: 141 IGALSVAVVVISTATISAIIAALITTGWIGFFWTVWLVTKKSAGFAKHSLGMTGS 195


>ref|XP_002305896.1| predicted protein [Populus trichocarpa] gi|222848860|gb|EEE86407.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  194 bits (492), Expect = 1e-47
 Identities = 104/182 (57%), Positives = 128/182 (70%), Gaps = 3/182 (1%)
 Frame = +1

Query: 25  DVEESLYGVLERIFRAILSPEDDEK---TSLFVRIKKSFYQNLPLIPEASRNSTRNLLIW 195
           D E  LY V+ R+   IL P+       TSL  RIK    +NLPL+ E SRNS + LL W
Sbjct: 23  DQEIDLYTVIHRVIVMILYPDPGSSASSTSLLQRIKIVLSENLPLLGEGSRNSGKKLLQW 82

Query: 196 TRQGTALRALLVISIGTIVLLALSGLLVFMVFFVAATVNXXXXXXXXXXXXXGGCLAIFF 375
           T++G+ LRALLVIS+GTI LL+L+G+LVFM+FF+AAT N             GG LA+FF
Sbjct: 83  TQRGSPLRALLVISVGTIALLSLTGVLVFMLFFLAATFNAIVISLLMSLAAAGGFLALFF 142

Query: 376 TCMTAIYIGALSVAVFVISSATITTIFAVLIATGWIGFFWTVWIATKKGMSLAKHSLSMT 555
             + AIYIGALSVAVFVIS+ATI+   AVLI TGWIGFFWTVW+ TKK + +AKHSL++T
Sbjct: 143 AFLAAIYIGALSVAVFVISTATISATVAVLIVTGWIGFFWTVWLVTKKSIGVAKHSLTVT 202

Query: 556 GS 561
           GS
Sbjct: 203 GS 204


>ref|XP_002528501.1| conserved hypothetical protein [Ricinus communis]
           gi|223532061|gb|EEF33870.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 228

 Score =  189 bits (480), Expect = 3e-46
 Identities = 99/180 (55%), Positives = 129/180 (71%), Gaps = 3/180 (1%)
 Frame = +1

Query: 31  EESLYGVLERIFRAILSPE---DDEKTSLFVRIKKSFYQNLPLIPEASRNSTRNLLIWTR 201
           E +LY VL R+   I  P+   D     +  RIK    +N PL+ +ASR++ R ++IWTR
Sbjct: 28  ELTLYSVLHRMASMIFVPDSRSDAASLPVMQRIKACVSENGPLLKDASRDTGRKIVIWTR 87

Query: 202 QGTALRALLVISIGTIVLLALSGLLVFMVFFVAATVNXXXXXXXXXXXXXGGCLAIFFTC 381
           +G+ LRALLVIS+G+I  + L+GLLVFM+FF+AATVN             GG LA+FF C
Sbjct: 88  RGSPLRALLVISLGSITFVTLTGLLVFMLFFLAATVNAIVVSLLISLAAAGGFLALFFAC 147

Query: 382 MTAIYIGALSVAVFVISSATITTIFAVLIATGWIGFFWTVWIATKKGMSLAKHSLSMTGS 561
           +TA+YIGALS+AVFVIS+ATI+ I AVLIATGWIGF  TVW+ TKK +++AKHSL+MTGS
Sbjct: 148 VTAVYIGALSIAVFVISTATISAIIAVLIATGWIGFLCTVWLVTKKSLAVAKHSLNMTGS 207


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