BLASTX nr result

ID: Coptis23_contig00005475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005475
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631825.1| PREDICTED: uncharacterized protein LOC100854...    67   2e-09
ref|NP_001077722.1| uncharacterized protein [Arabidopsis thalian...    61   1e-07
ref|XP_002891820.1| hypothetical protein ARALYDRAFT_474577 [Arab...    59   6e-07
gb|EEC80524.1| hypothetical protein OsI_22804 [Oryza sativa Indi...    59   6e-07
ref|NP_001057545.1| Os06g0332500 [Oryza sativa Japonica Group] g...    59   6e-07

>ref|XP_003631825.1| PREDICTED: uncharacterized protein LOC100854904 [Vitis vinifera]
           gi|296081875|emb|CBI20880.3| unnamed protein product
           [Vitis vinifera]
          Length = 98

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 32/37 (86%), Positives = 35/37 (94%)
 Frame = -3

Query: 447 VTMMPLHSAIASARLNSILSSESQSWGMIPQGISMPL 337
           V+MMPLHSAIASARL S+LS ESQSWG+IPQGISMPL
Sbjct: 62  VSMMPLHSAIASARLTSVLSVESQSWGLIPQGISMPL 98


>ref|NP_001077722.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332195081|gb|AEE33202.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 97

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 36/70 (51%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = -3

Query: 543 IHSKNAPNSSISPCPTISA-NXXXXXXXXXXXLVTMMPLHSAIASARLNSILSSESQSWG 367
           I S  +P  S SP    S  N            ++M+PLHSAIASARL S LS ES+SWG
Sbjct: 28  ISSLPSPIKSSSPSSATSRINQSFRLPVELSCCLSMLPLHSAIASARLISSLSVESKSWG 87

Query: 366 MIPQGISMPL 337
           ++PQGISMPL
Sbjct: 88  LVPQGISMPL 97


>ref|XP_002891820.1| hypothetical protein ARALYDRAFT_474577 [Arabidopsis lyrata subsp.
           lyrata] gi|297337662|gb|EFH68079.1| hypothetical protein
           ARALYDRAFT_474577 [Arabidopsis lyrata subsp. lyrata]
          Length = 97

 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
 Frame = -3

Query: 543 IHSKNAPNSSISPCP---TISANXXXXXXXXXXXLVTMMPLHSAIASARLNSILSSESQS 373
           +H+ + P+   S  P   T   N            ++M+PLHSAIASARL S LS ES+S
Sbjct: 26  VHASSLPSPIKSSSPSSATTRINQSFRLPVELSSCLSMLPLHSAIASARLISSLSVESKS 85

Query: 372 WGMIPQGISMPL 337
           W ++PQGISMPL
Sbjct: 86  WTLVPQGISMPL 97


>gb|EEC80524.1| hypothetical protein OsI_22804 [Oryza sativa Indica Group]
          Length = 90

 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 26/37 (70%), Positives = 33/37 (89%)
 Frame = -3

Query: 447 VTMMPLHSAIASARLNSILSSESQSWGMIPQGISMPL 337
           +++MPLHSA+ASARL S +S ESQSWG++PQG SMPL
Sbjct: 54  LSVMPLHSAVASARLRSAISPESQSWGIVPQGNSMPL 90


>ref|NP_001057545.1| Os06g0332500 [Oryza sativa Japonica Group]
           gi|113595585|dbj|BAF19459.1| Os06g0332500 [Oryza sativa
           Japonica Group]
          Length = 90

 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 26/37 (70%), Positives = 33/37 (89%)
 Frame = -3

Query: 447 VTMMPLHSAIASARLNSILSSESQSWGMIPQGISMPL 337
           +++MPLHSA+ASARL S +S ESQSWG++PQG SMPL
Sbjct: 54  LSVMPLHSAVASARLRSAISPESQSWGIVPQGNSMPL 90


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