BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005465
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298398.1| predicted protein [Populus trichocarpa] gi|1...    80   3e-13
gb|AFK48333.1| unknown [Medicago truncatula]                           80   4e-13
ref|XP_002277909.1| PREDICTED: photosystem II 5 kDa protein, chl...    79   5e-13
ref|XP_002314076.1| predicted protein [Populus trichocarpa] gi|2...    78   1e-12
ref|XP_002517817.1| Photosystem II 5 kDa protein, chloroplast pr...    77   2e-12

>ref|XP_002298398.1| predicted protein [Populus trichocarpa] gi|118487685|gb|ABK95667.1|
           unknown [Populus trichocarpa]
           gi|118488853|gb|ABK96236.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|118488867|gb|ABK96243.1| unknown
           [Populus trichocarpa x Populus deltoides]
           gi|118489821|gb|ABK96710.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|118489889|gb|ABK96742.1| unknown
           [Populus trichocarpa x Populus deltoides]
           gi|222845656|gb|EEE83203.1| predicted protein [Populus
           trichocarpa]
          Length = 105

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 49/109 (44%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
 Frame = +1

Query: 154 MASITLTAPTFIGSLXXXXXXXXXXXXXXLVVVKAAGSTEGVAVKQVDNNKKENNNGRRD 333
           MAS+T+TA    GS               L+V KA+ +TEGV V+    NK+E+++GRRD
Sbjct: 1   MASMTMTASFLAGSTMAKQPLTTPRRG--LIVAKASRTTEGVNVEM--KNKEESSSGRRD 56

Query: 334 MMFXXXXXXXXXXXXXXXXDVPP-RGSPEAKKLYAPVCVTMPTARICHK 477
           +MF                D  P RG+PEAKK YAP+CVTMPTARIC K
Sbjct: 57  LMFAAAAAAAYSIARVAIADEEPERGTPEAKKKYAPICVTMPTARICRK 105


>gb|AFK48333.1| unknown [Medicago truncatula]
          Length = 108

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 50/107 (46%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
 Frame = +1

Query: 154 MASITLTAPTFIGSLXXXXXXXXXXXXXXLVVVKAAGSTEGVAVKQVDNNKKENNNGRRD 333
           MASIT+TA  F G                LVV  AA + EG  +K   +N+KE  NGRR+
Sbjct: 1   MASITMTA-AFFGGSSAIANRSPVATQRKLVVANAAKAVEGGKMKVNYDNEKEETNGRRN 59

Query: 334 MMFXXXXXXXXXXXXXXXX-DVPPRGSPEAKKLYAPVCVTMPTARIC 471
           +MF                 D P RGSPEAKK YAPVCVTMPTARIC
Sbjct: 60  IMFAAAAAAVCSVAGMALAADEPKRGSPEAKKAYAPVCVTMPTARIC 106


>ref|XP_002277909.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic [Vitis
           vinifera] gi|147792102|emb|CAN66292.1| hypothetical
           protein VITISV_027031 [Vitis vinifera]
          Length = 109

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 46/110 (41%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
 Frame = +1

Query: 154 MASITLTAPTFIGSLXXXXXXXXXXXXXXLVVVKAA--GSTEGVAVKQVDNNKKENNNGR 327
           MAS+T+T+ +F+G                LVVV +A   + EG  VK   + KKE NNGR
Sbjct: 1   MASVTMTS-SFLGGACLADRSPAAAARRRLVVVNSARAAAAEGEKVKLNYDAKKEANNGR 59

Query: 328 RDMMFXXXXXXXXXXXXXXXXDVPPRGSPEAKKLYAPVCVTMPTARICHK 477
           R+++F                  P  G+PEAKK+YAP+CVTMPTA+ICHK
Sbjct: 60  RELVFAAAAAAVCSVAGIAMAGEPKPGTPEAKKIYAPICVTMPTAKICHK 109


>ref|XP_002314076.1| predicted protein [Populus trichocarpa] gi|222850484|gb|EEE88031.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 48/107 (44%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
 Frame = +1

Query: 154 MASITLTAPTFIGSLXXXXXXXXXXXXXXLVVVKAAGSTEGVAVKQVDNNKKENNNGRRD 333
           MASIT+TA    GS               L+V KA+ +TEGV V+    N++E++ GRRD
Sbjct: 1   MASITMTASFLTGSAMAKQPSTTPRRG--LIVAKASRATEGVNVEM--KNREESSGGRRD 56

Query: 334 MMFXXXXXXXXXXXXXXXXDVPPR-GSPEAKKLYAPVCVTMPTARIC 471
           +MF                D  PR G+PEAKK YAP+CVTMPTARIC
Sbjct: 57  LMFAAAAAAAYSIARVAIADEEPRRGTPEAKKKYAPICVTMPTARIC 103


>ref|XP_002517817.1| Photosystem II 5 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223543089|gb|EEF44624.1|
           Photosystem II 5 kDa protein, chloroplast precursor,
           putative [Ricinus communis]
          Length = 104

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 46/108 (42%), Positives = 59/108 (54%)
 Frame = +1

Query: 154 MASITLTAPTFIGSLXXXXXXXXXXXXXXLVVVKAAGSTEGVAVKQVDNNKKENNNGRRD 333
           MASIT+ A +F+ S               +V   AAG   G  VK   +++KE++NGRRD
Sbjct: 1   MASITMAA-SFLSSNSLGSQSPVTARRTLVVANAAAG---GQKVKMNHDSEKESSNGRRD 56

Query: 334 MMFXXXXXXXXXXXXXXXXDVPPRGSPEAKKLYAPVCVTMPTARICHK 477
           +MF                + P  G+PEAKK Y+PVCVTMPTARICHK
Sbjct: 57  LMFAAVAAAACSVAGVAAAEEPKAGTPEAKKFYSPVCVTMPTARICHK 104