BLASTX nr result
ID: Coptis23_contig00005462
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00005462
(4320 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003624755.1| Cysteine synthase [Medicago truncatula] gi|3... 183 3e-68
ref|XP_003521872.1| PREDICTED: probable cysteine synthase, chlor... 192 3e-57
ref|XP_002271966.2| PREDICTED: probable cysteine synthase, chlor... 194 4e-57
ref|XP_003554060.1| PREDICTED: probable cysteine synthase, chlor... 191 4e-57
ref|XP_003554061.1| PREDICTED: probable cysteine synthase, chlor... 191 4e-57
>ref|XP_003624755.1| Cysteine synthase [Medicago truncatula] gi|355499770|gb|AES80973.1|
Cysteine synthase [Medicago truncatula]
Length = 368
Score = 183 bits (464), Expect(5) = 3e-68
Identities = 90/114 (78%), Positives = 101/114 (88%)
Frame = -3
Query: 1171 TRMIYLTKVVGGCVANVAAKLESMEPCRSAKDRIGLSMIADAEENDGISPGKTISVEPTT 992
T MIYL KV GCVANVAAKLESMEPCRS KDRIG SM+ADAEE+ ISPGKT+ VEPTT
Sbjct: 76 TPMIYLNKVTDGCVANVAAKLESMEPCRSVKDRIGYSMLADAEESGAISPGKTVLVEPTT 135
Query: 991 GNTGIGIAFVAATKVYKLIVTMPASINLERRLLLRAFGAEIILTDPAKGLKGAV 830
GNTG+G+AFVAATK YKLIVTMPAS+N+ERR+LLR FGAE++LT+ KGLKGAV
Sbjct: 136 GNTGLGLAFVAATKGYKLIVTMPASVNIERRILLRTFGAEVVLTNAEKGLKGAV 189
Score = 52.0 bits (123), Expect(5) = 3e-68
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = -2
Query: 530 GFIPSILNVKLLDEVVKVTTGEAVDMARRLA 438
GFIPSIL++KLLDEVVKVT EA++MARRLA
Sbjct: 279 GFIPSILDIKLLDEVVKVTNVEAIEMARRLA 309
Score = 50.4 bits (119), Expect(5) = 3e-68
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = -1
Query: 828 VDKTKEIAHGTPNAYMFQQFDNRANTKV 745
VDK +EI +GTPNAYMF+QFDNR NTK+
Sbjct: 189 VDKAEEIVYGTPNAYMFRQFDNRNNTKI 216
Score = 35.0 bits (79), Expect(5) = 3e-68
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -3
Query: 640 VFKDTMTSVDIFVAAIXXXXXXXXXXGYLKMMNKDIK 530
+++DTM +VD+ VAAI YLK+MNK IK
Sbjct: 225 IWEDTMGNVDLLVAAIGTGGTITGTGQYLKLMNKKIK 261
Score = 30.4 bits (67), Expect(5) = 3e-68
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -1
Query: 1281 RVARLDSVISPQNVAFHGREELETVSIAEDVTQLIG 1174
R + +S ++ RE L+ V+IAEDVTQLIG
Sbjct: 39 RTIAATATVSTPSLFSTTREGLDAVNIAEDVTQLIG 74
>ref|XP_003521872.1| PREDICTED: probable cysteine synthase, chloroplastic-like [Glycine
max]
Length = 372
Score = 192 bits (487), Expect(3) = 3e-57
Identities = 114/214 (53%), Positives = 133/214 (62%)
Frame = -3
Query: 1171 TRMIYLTKVVGGCVANVAAKLESMEPCRSAKDRIGLSMIADAEENDGISPGKTISVEPTT 992
T M+YL KV GCVAN+AAKLESMEPCRS KDRIG SM++DAEE ISPGKTI VEPTT
Sbjct: 80 TPMVYLNKVTEGCVANIAAKLESMEPCRSVKDRIGYSMLSDAEEIGAISPGKTILVEPTT 139
Query: 991 GNTGIGIAFVAATKVYKLIVTMPASINLERRLLLRAFGAEIILTDPAKGLKGAVR**D*R 812
GNTG+GIAFVAATK YKLIVTMPAS+N+ERR+LLRAFGAE+ILTD KGLKGAV
Sbjct: 140 GNTGLGIAFVAATKGYKLIVTMPASVNVERRILLRAFGAEVILTDAEKGLKGAV------ 193
Query: 811 NCSWNTKCIHVSTV*QSGKYKGCALSPCSAFALSLTPFSIVVGVQFLSLLTF*RFLNVFK 632
K + S +A+ + F + +++
Sbjct: 194 -----------------DKAEEIVHSTNNAYMFRQFDNMTNTKIHFETTGP-----EIWE 231
Query: 631 DTMTSVDIFVAAIXXXXXXXXXXGYLKMMNKDIK 530
DTM +VDI VA I YLKMMNK+IK
Sbjct: 232 DTMGNVDILVAGIGTGGTVTGTGQYLKMMNKNIK 265
Score = 51.2 bits (121), Expect(3) = 3e-57
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = -2
Query: 530 GFIPSILNVKLLDEVVKVTTGEAVDMARRLA 438
GF+PSIL+VKLLDEV+KVT EAV+MARRLA
Sbjct: 283 GFMPSILDVKLLDEVIKVTNVEAVEMARRLA 313
Score = 29.6 bits (65), Expect(3) = 3e-57
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -1
Query: 1242 VAFHGREELETVSIAEDVTQLIG 1174
+ + R+ +TV+IAEDVTQLIG
Sbjct: 56 LVYSTRQGFDTVNIAEDVTQLIG 78
>ref|XP_002271966.2| PREDICTED: probable cysteine synthase, chloroplastic-like [Vitis
vinifera] gi|296085861|emb|CBI31185.3| unnamed protein
product [Vitis vinifera]
Length = 390
Score = 194 bits (492), Expect(3) = 4e-57
Identities = 114/215 (53%), Positives = 135/215 (62%)
Frame = -3
Query: 1174 RTRMIYLTKVVGGCVANVAAKLESMEPCRSAKDRIGLSMIADAEENDGISPGKTISVEPT 995
RT MIYL KV GCVAN+AAKLESMEPCRS KDRIG SMI+DAEE ISPG++I VEPT
Sbjct: 94 RTPMIYLNKVTQGCVANIAAKLESMEPCRSVKDRIGYSMISDAEETGAISPGRSILVEPT 153
Query: 994 TGNTGIGIAFVAATKVYKLIVTMPASINLERRLLLRAFGAEIILTDPAKGLKGAVR**D* 815
+GNTG+GIAFVAATK YKLIVTMPASI++ERR+LLRAFGAEI+LTDP KG+KGAV
Sbjct: 154 SGNTGLGIAFVAATKGYKLIVTMPASIDIERRILLRAFGAEIVLTDPMKGIKGAV----- 208
Query: 814 RNCSWNTKCIHVSTV*QSGKYKGCALSPCSAFALSLTPFSIVVGVQFLSLLTF*RFLNVF 635
K + S +A+ + F + ++
Sbjct: 209 ------------------DKAEEIVQSMPNAYMFQQFDNMANAKIHFETTGP-----EIW 245
Query: 634 KDTMTSVDIFVAAIXXXXXXXXXXGYLKMMNKDIK 530
+DT+ SVDIFVA I YLKMM +DIK
Sbjct: 246 EDTVGSVDIFVAGIGTGGTVTGTGRYLKMMKRDIK 280
Score = 49.7 bits (117), Expect(3) = 4e-57
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = -2
Query: 530 GFIPSILNVKLLDEVVKVTTGEAVDMARRLA 438
G++PSIL+VKLLDEV+KVT EAV+MAR+LA
Sbjct: 298 GYVPSILDVKLLDEVLKVTNDEAVEMARKLA 328
Score = 28.9 bits (63), Expect(3) = 4e-57
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -1
Query: 1224 EELETVSIAEDVTQLIG 1174
E++ TV+IA+DVTQLIG
Sbjct: 77 EDIHTVNIADDVTQLIG 93
>ref|XP_003554060.1| PREDICTED: probable cysteine synthase, chloroplastic-like isoform 1
[Glycine max]
Length = 381
Score = 191 bits (484), Expect(3) = 4e-57
Identities = 112/214 (52%), Positives = 133/214 (62%)
Frame = -3
Query: 1171 TRMIYLTKVVGGCVANVAAKLESMEPCRSAKDRIGLSMIADAEENDGISPGKTISVEPTT 992
T M+YL KV GCVAN+AAKLESMEPCRS KDRIG SM++DAEE ISPGKTI VEPTT
Sbjct: 79 TPMVYLNKVTEGCVANIAAKLESMEPCRSVKDRIGYSMLSDAEEIGAISPGKTILVEPTT 138
Query: 991 GNTGIGIAFVAATKVYKLIVTMPASINLERRLLLRAFGAEIILTDPAKGLKGAVR**D*R 812
GNTG+GIAFVAATK YKLIVTMPASIN+ERR+LLRAFGAE++LTD KGLKGAV
Sbjct: 139 GNTGLGIAFVAATKGYKLIVTMPASINVERRILLRAFGAEVVLTDAEKGLKGAV------ 192
Query: 811 NCSWNTKCIHVSTV*QSGKYKGCALSPCSAFALSLTPFSIVVGVQFLSLLTF*RFLNVFK 632
K + + +A+ + F + +++
Sbjct: 193 -----------------DKAEEIVRNTPNAYMFRQFDNMTNTKIHFETTGP-----EIWE 230
Query: 631 DTMTSVDIFVAAIXXXXXXXXXXGYLKMMNKDIK 530
DTM +VD+ VA I YLKMMNK+IK
Sbjct: 231 DTMGNVDVLVAGIGTGGTVTGTGRYLKMMNKNIK 264
Score = 50.8 bits (120), Expect(3) = 4e-57
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = -2
Query: 530 GFIPSILNVKLLDEVVKVTTGEAVDMARRLA 438
GF+PSIL++KLLDEV+KVT EAV+MARRLA
Sbjct: 292 GFMPSILDIKLLDEVIKVTNVEAVEMARRLA 322
Score = 30.8 bits (68), Expect(3) = 4e-57
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -1
Query: 1257 ISPQNVAFHGREELETVSIAEDVTQLIG 1174
+S + + R+ +TV+IAEDVTQLIG
Sbjct: 50 VSSAPLVYSTRQGFDTVNIAEDVTQLIG 77
>ref|XP_003554061.1| PREDICTED: probable cysteine synthase, chloroplastic-like isoform 2
[Glycine max]
Length = 371
Score = 191 bits (484), Expect(3) = 4e-57
Identities = 112/214 (52%), Positives = 133/214 (62%)
Frame = -3
Query: 1171 TRMIYLTKVVGGCVANVAAKLESMEPCRSAKDRIGLSMIADAEENDGISPGKTISVEPTT 992
T M+YL KV GCVAN+AAKLESMEPCRS KDRIG SM++DAEE ISPGKTI VEPTT
Sbjct: 79 TPMVYLNKVTEGCVANIAAKLESMEPCRSVKDRIGYSMLSDAEEIGAISPGKTILVEPTT 138
Query: 991 GNTGIGIAFVAATKVYKLIVTMPASINLERRLLLRAFGAEIILTDPAKGLKGAVR**D*R 812
GNTG+GIAFVAATK YKLIVTMPASIN+ERR+LLRAFGAE++LTD KGLKGAV
Sbjct: 139 GNTGLGIAFVAATKGYKLIVTMPASINVERRILLRAFGAEVVLTDAEKGLKGAV------ 192
Query: 811 NCSWNTKCIHVSTV*QSGKYKGCALSPCSAFALSLTPFSIVVGVQFLSLLTF*RFLNVFK 632
K + + +A+ + F + +++
Sbjct: 193 -----------------DKAEEIVRNTPNAYMFRQFDNMTNTKIHFETTGP-----EIWE 230
Query: 631 DTMTSVDIFVAAIXXXXXXXXXXGYLKMMNKDIK 530
DTM +VD+ VA I YLKMMNK+IK
Sbjct: 231 DTMGNVDVLVAGIGTGGTVTGTGRYLKMMNKNIK 264
Score = 50.8 bits (120), Expect(3) = 4e-57
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = -2
Query: 530 GFIPSILNVKLLDEVVKVTTGEAVDMARRLA 438
GF+PSIL++KLLDEV+KVT EAV+MARRLA
Sbjct: 282 GFMPSILDIKLLDEVIKVTNVEAVEMARRLA 312
Score = 30.8 bits (68), Expect(3) = 4e-57
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -1
Query: 1257 ISPQNVAFHGREELETVSIAEDVTQLIG 1174
+S + + R+ +TV+IAEDVTQLIG
Sbjct: 50 VSSAPLVYSTRQGFDTVNIAEDVTQLIG 77