BLASTX nr result

ID: Coptis23_contig00005460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005460
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270198.1| PREDICTED: uncharacterized protein LOC100263...   155   6e-36
ref|XP_002299531.1| predicted protein [Populus trichocarpa] gi|2...   149   7e-34
ref|XP_004146523.1| PREDICTED: uncharacterized protein LOC101210...   145   1e-32
gb|AFK43426.1| unknown [Medicago truncatula]                          142   7e-32
ref|NP_001190810.1| uncharacterized protein [Arabidopsis thalian...   141   2e-31

>ref|XP_002270198.1| PREDICTED: uncharacterized protein LOC100263372 isoform 1 [Vitis
           vinifera] gi|297742517|emb|CBI34666.3| unnamed protein
           product [Vitis vinifera]
          Length = 149

 Score =  155 bits (393), Expect = 6e-36
 Identities = 77/108 (71%), Positives = 89/108 (82%)
 Frame = +2

Query: 83  EIIKVLEIVERDSMAIAESYTXXXXXXXXXXXXVTNSSVDHMQCFNDVAGRVQESALDAA 262
           E+++ LE+VERDS+AIAES+T            VT+SSVDHM+CFND AGR+QESALDAA
Sbjct: 42  ELLRALEVVERDSVAIAESFTSLFASLRLALSEVTSSSVDHMRCFNDAAGRLQESALDAA 101

Query: 263 TRGNRYINSCLRLNEEMKGIETLAMQLKILRRNVDTLDSAVNKLVHLP 406
           TRGNRYINSCLRLNEEMKG++ LAMQLKILRRNVD LDS VN+L  LP
Sbjct: 102 TRGNRYINSCLRLNEEMKGVDGLAMQLKILRRNVDALDSGVNRLTRLP 149


>ref|XP_002299531.1| predicted protein [Populus trichocarpa] gi|222846789|gb|EEE84336.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score =  149 bits (375), Expect = 7e-34
 Identities = 75/115 (65%), Positives = 86/115 (74%)
 Frame = +2

Query: 62  KPSLNQNEIIKVLEIVERDSMAIAESYTXXXXXXXXXXXXVTNSSVDHMQCFNDVAGRVQ 241
           K +LNQ EI K LEI+ERDS+AIA S+T             T++SVDHMQCF D   R+Q
Sbjct: 40  KTNLNQGEIFKALEIIERDSLAIAGSFTSLFASLRFALSEATSTSVDHMQCFGDATARLQ 99

Query: 242 ESALDAATRGNRYINSCLRLNEEMKGIETLAMQLKILRRNVDTLDSAVNKLVHLP 406
           ES LDAAT+GNRYINSC+RLNEEMKGI+TLA QLK LRRNVD LDSAV KL+  P
Sbjct: 100 ESVLDAATKGNRYINSCMRLNEEMKGIDTLATQLKNLRRNVDVLDSAVTKLLRFP 154


>ref|XP_004146523.1| PREDICTED: uncharacterized protein LOC101210623 [Cucumis sativus]
          Length = 153

 Score =  145 bits (365), Expect = 1e-32
 Identities = 72/128 (56%), Positives = 98/128 (76%)
 Frame = +2

Query: 23  SELKEDVSELETIKPSLNQNEIIKVLEIVERDSMAIAESYTXXXXXXXXXXXXVTNSSVD 202
           S + ED ++ ++   SL+Q +I+K +E+VE+DS+A+AES+T            VT++S+D
Sbjct: 29  SSVIEDCTKTQS---SLSQAQILKAIEVVEKDSLAMAESFTSLFASLRSVLSEVTSNSID 85

Query: 203 HMQCFNDVAGRVQESALDAATRGNRYINSCLRLNEEMKGIETLAMQLKILRRNVDTLDSA 382
           HM CFND AGR+QES LDAAT+GNRYINS LRLN+EMKG++ LA QLK+LR+NVD LD A
Sbjct: 86  HMHCFNDAAGRLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQLKVLRKNVDELDLA 145

Query: 383 VNKLVHLP 406
           VNKL++ P
Sbjct: 146 VNKLLNFP 153


>gb|AFK43426.1| unknown [Medicago truncatula]
          Length = 144

 Score =  142 bits (358), Expect = 7e-32
 Identities = 74/121 (61%), Positives = 92/121 (76%), Gaps = 1/121 (0%)
 Frame = +2

Query: 44  SELET-IKPSLNQNEIIKVLEIVERDSMAIAESYTXXXXXXXXXXXXVTNSSVDHMQCFN 220
           SE ET I  + NQ EI+K +E+VERDS AIA+S+T             T++S+ H+QCF 
Sbjct: 23  SERETLIFNANNQREILKAIEVVERDSFAIAQSFTSVFASLRLSLSQSTDTSLHHIQCFT 82

Query: 221 DVAGRVQESALDAATRGNRYINSCLRLNEEMKGIETLAMQLKILRRNVDTLDSAVNKLVH 400
           D AG +QES LDAAT+GNRYINSCL+LNEEMK I++LA QLKILRR+VD LDSAVNKL+H
Sbjct: 83  DAAGHLQESVLDAATKGNRYINSCLKLNEEMKSIDSLASQLKILRRHVDVLDSAVNKLLH 142

Query: 401 L 403
           +
Sbjct: 143 V 143


>ref|NP_001190810.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332659340|gb|AEE84740.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 147

 Score =  141 bits (355), Expect = 2e-31
 Identities = 71/113 (62%), Positives = 85/113 (75%)
 Frame = +2

Query: 68  SLNQNEIIKVLEIVERDSMAIAESYTXXXXXXXXXXXXVTNSSVDHMQCFNDVAGRVQES 247
           SLNQ EI+K L  VE+DS AIAES++             T SSVDHM CF + AGR+QE+
Sbjct: 35  SLNQGEILKTLATVEKDSQAIAESFSSLFVSLRSTLSEATGSSVDHMACFGEAAGRLQEN 94

Query: 248 ALDAATRGNRYINSCLRLNEEMKGIETLAMQLKILRRNVDTLDSAVNKLVHLP 406
           ALDAAT+GNRYINSCLRLNEE+KG+E LA +LK LR+NVD LD+AVNKL+  P
Sbjct: 95  ALDAATKGNRYINSCLRLNEEIKGVENLAARLKHLRKNVDVLDTAVNKLLRPP 147


Top