BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005459
         (1098 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283333.1| PREDICTED: protein RER1A [Vitis vinifera] gi...   269   8e-70
gb|AFK42932.1| unknown [Medicago truncatula]                          247   4e-63
gb|AFK39450.1| unknown [Lotus japonicus]                              246   5e-63
ref|XP_003517318.1| PREDICTED: protein RER1A-like [Glycine max]       243   8e-62
ref|XP_003573688.1| PREDICTED: protein RER1A-like [Brachypodium ...   239   9e-61

>ref|XP_002283333.1| PREDICTED: protein RER1A [Vitis vinifera]
            gi|296082366|emb|CBI21371.3| unnamed protein product
            [Vitis vinifera]
          Length = 204

 Score =  269 bits (688), Expect = 8e-70
 Identities = 135/191 (70%), Positives = 149/191 (78%), Gaps = 3/191 (1%)
 Frame = -3

Query: 1060 DLSYPSFVTD---YTLNISRKYQHLLDKSTPHVLNRWIGFGIVAFIYIVRVYFLEGYYIV 890
            DLS  S VT    +T +ISRKYQHLLDKSTPH+LNRWIGF  +AFIYIVRVYF++G+YIV
Sbjct: 13   DLSSSSPVTSVSRWTHDISRKYQHLLDKSTPHILNRWIGFFAIAFIYIVRVYFVQGFYIV 72

Query: 889  SXXXXXXXXXXXIAFLSPQVDPELTQAAGIVGPDNNDEDAGPLLPTRSTDEFRPFVRRLP 710
            S           I FLSPQVDPE+ +              GP LPTR +DEFRPFVRRLP
Sbjct: 73   SYGLGIYILNLLIGFLSPQVDPEIQELVD-----------GPTLPTRGSDEFRPFVRRLP 121

Query: 709  EFKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLFYWMVLFFLTMKKQILHMIKYKYVPF 530
            EFKFWYS+TKAFCIAFVMTFFSVFDVPVFWPILLFYWMVLF LTM++QI+HMIKYKYVPF
Sbjct: 122  EFKFWYSITKAFCIAFVMTFFSVFDVPVFWPILLFYWMVLFTLTMRRQIMHMIKYKYVPF 181

Query: 529  SLGKQRYSGKR 497
            S GKQRY GKR
Sbjct: 182  SFGKQRYGGKR 192


>gb|AFK42932.1| unknown [Medicago truncatula]
          Length = 192

 Score =  247 bits (630), Expect = 4e-63
 Identities = 119/190 (62%), Positives = 139/190 (73%)
 Frame = -3

Query: 1066 TPDLSYPSFVTDYTLNISRKYQHLLDKSTPHVLNRWIGFGIVAFIYIVRVYFLEGYYIVS 887
            T D S  + +T +    SR+YQH+LDKSTPHV  RW+G  +VA +Y++RVY ++G+Y+VS
Sbjct: 3    TEDTSPAAAITRWKFEASRRYQHILDKSTPHVSQRWLGCLVVALVYVLRVYIVQGFYVVS 62

Query: 886  XXXXXXXXXXXIAFLSPQVDPELTQAAGIVGPDNNDEDAGPLLPTRSTDEFRPFVRRLPE 707
                       I FLSPQVDPE+            D D GP LPT  +DEFRPFVRRLPE
Sbjct: 63   YGLGIYILNLLIGFLSPQVDPEIL-----------DADNGPSLPTSGSDEFRPFVRRLPE 111

Query: 706  FKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLFYWMVLFFLTMKKQILHMIKYKYVPFS 527
            FKFWYS+TKAFCIAFVMTFFS FDVPVFWPILLFYW+VLF LTM++QI HMIKYKYVPFS
Sbjct: 112  FKFWYSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIAHMIKYKYVPFS 171

Query: 526  LGKQRYSGKR 497
             GKQRY  KR
Sbjct: 172  FGKQRYDRKR 181


>gb|AFK39450.1| unknown [Lotus japonicus]
          Length = 191

 Score =  246 bits (629), Expect = 5e-63
 Identities = 119/188 (63%), Positives = 143/188 (76%)
 Frame = -3

Query: 1060 DLSYPSFVTDYTLNISRKYQHLLDKSTPHVLNRWIGFGIVAFIYIVRVYFLEGYYIVSXX 881
            ++S  + ++ + L +S++YQH+LDK+TPHVL RW+G  +VA IY++RVY +EG+YIVS  
Sbjct: 6    EVSPETAISRWKLGLSQQYQHMLDKTTPHVLRRWVGCLVVASIYVLRVYLVEGFYIVSYA 65

Query: 880  XXXXXXXXXIAFLSPQVDPELTQAAGIVGPDNNDEDAGPLLPTRSTDEFRPFVRRLPEFK 701
                     I FLSPQVDPE+              D GP LPT  +DEFRPFVRRLPEFK
Sbjct: 66   LGIYILNLLIGFLSPQVDPEVY-------------DDGPTLPTSGSDEFRPFVRRLPEFK 112

Query: 700  FWYSMTKAFCIAFVMTFFSVFDVPVFWPILLFYWMVLFFLTMKKQILHMIKYKYVPFSLG 521
            FWYS+TKAFCIAFVMTFFS FDVPVFWPILLFYW+VLF LTM++QI HMIKYKYVPFS G
Sbjct: 113  FWYSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFG 172

Query: 520  KQRYSGKR 497
            KQRY+GKR
Sbjct: 173  KQRYTGKR 180


>ref|XP_003517318.1| PREDICTED: protein RER1A-like [Glycine max]
          Length = 191

 Score =  243 bits (619), Expect = 8e-62
 Identities = 117/188 (62%), Positives = 140/188 (74%)
 Frame = -3

Query: 1060 DLSYPSFVTDYTLNISRKYQHLLDKSTPHVLNRWIGFGIVAFIYIVRVYFLEGYYIVSXX 881
            D S  + ++ +   +S++YQH+LDK+TPHVL RWIG  +VA +Y++RVY ++G+YIVS  
Sbjct: 8    DHSPEAVISRWKFAVSQQYQHMLDKTTPHVLRRWIGCLVVAAVYVLRVYLVQGFYIVSYA 67

Query: 880  XXXXXXXXXIAFLSPQVDPELTQAAGIVGPDNNDEDAGPLLPTRSTDEFRPFVRRLPEFK 701
                     I FLSPQVDPE++               GP LPTR +DEFRPFVRRLPEFK
Sbjct: 68   LGIYILNLLIGFLSPQVDPEISD--------------GPTLPTRGSDEFRPFVRRLPEFK 113

Query: 700  FWYSMTKAFCIAFVMTFFSVFDVPVFWPILLFYWMVLFFLTMKKQILHMIKYKYVPFSLG 521
            FWYS+TKAFCIAFVMTFFS FDVPVFWPILLFYW+VLF LTM++QI HMIKYKYVPFS G
Sbjct: 114  FWYSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFG 173

Query: 520  KQRYSGKR 497
            K RY GKR
Sbjct: 174  KLRYDGKR 181


>ref|XP_003573688.1| PREDICTED: protein RER1A-like [Brachypodium distachyon]
          Length = 218

 Score =  239 bits (610), Expect = 9e-61
 Identities = 113/173 (65%), Positives = 133/173 (76%)
 Frame = -3

Query: 1015 SRKYQHLLDKSTPHVLNRWIGFGIVAFIYIVRVYFLEGYYIVSXXXXXXXXXXXIAFLSP 836
            SR++QHLLD+STPHV  RW+G   V  +Y +R +F+ GYYIV+           IAFLSP
Sbjct: 44   SRRFQHLLDRSTPHVGRRWLGLAGVVLVYALRAWFVGGYYIVTYALGIYILNLLIAFLSP 103

Query: 835  QVDPELTQAAGIVGPDNNDEDAGPLLPTRSTDEFRPFVRRLPEFKFWYSMTKAFCIAFVM 656
            QVDPE+ +  G           GP LPTR++DEFRPFVRRLPEFKFWYS+ KAFCIAFVM
Sbjct: 104  QVDPEVAEVLG----------EGPALPTRASDEFRPFVRRLPEFKFWYSIVKAFCIAFVM 153

Query: 655  TFFSVFDVPVFWPILLFYWMVLFFLTMKKQILHMIKYKYVPFSLGKQRYSGKR 497
            TFF VFDVPVFWPILLFYW+VLF +TMK+QILHM+KY+YVPF+ GKQRYSGKR
Sbjct: 154  TFFGVFDVPVFWPILLFYWVVLFTVTMKRQILHMVKYRYVPFTFGKQRYSGKR 206