BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005454
         (1947 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containi...   865   0.0  
emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]   865   0.0  
ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containi...   825   0.0  
ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containi...   823   0.0  
ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containi...   818   0.0  

>ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like
            isoform 1 [Vitis vinifera]
          Length = 610

 Score =  865 bits (2234), Expect = 0.0
 Identities = 423/504 (83%), Positives = 462/504 (91%)
 Frame = -3

Query: 1780 NSSRGFEEFQSNNHLRRLVRNGELEEGFNYLEGLVYHGDTPDIIPCTSLIRGFCKIGKTQ 1601
            NSS   EE +SNNHLRRLVRNGELE+GF +LE +VY GD PDIIPCTSLIRGFC+IGKT+
Sbjct: 107  NSSSSIEEHESNNHLRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTK 166

Query: 1600 KATKVLEILEQSGAVPDVITYNVLISGYCKSGEIDNALQLLDRMSVAPDVVTYNTILRSL 1421
            KAT V+EILEQSGAVPDVITYNVLISGYCKSGEIDNALQ+LDRM+VAPDVVTYNTILR+L
Sbjct: 167  KATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTL 226

Query: 1420 CDSGKLKQAMKVLDHQLKRECYPDVFTYTILIEATCKESGVGQAMKLLDEMRNKGCKPDV 1241
            CDSGKLKQAM+VLD QL++ECYPDV TYTILIEATCKESGVGQAMKLLDEMRNKG KPDV
Sbjct: 227  CDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDV 286

Query: 1240 VTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWLDAEKLLAD 1061
            VTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRW+DAEKLL+D
Sbjct: 287  VTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSD 346

Query: 1060 MVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTANSLSYNPLLHGFCKEKK 881
            M+RKGCSPSVVTFNILINFLCR+GLLGRAIDILEKMP HGCT NSLSYNPLLHGFCKEKK
Sbjct: 347  MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 406

Query: 880  MDRAIQYLDVMVSRGCYPDIVTYNTLLTALCKDGKVDIAVKLLNQLGSKGCSPVLITYNT 701
            MDRAI+YLD+MVSRGCYPDIVTYNTLLTALCKDGKVD+AV++LNQL SKGCSPVLITYNT
Sbjct: 407  MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 466

Query: 700  VIDGLAKVGNTEHAVKLLGEMLAKGLQPDIITYSSLVAGLSREGKVQEAMKFFYELERLG 521
            VIDGL+KVG TE A+KLL EM  KGL+PDIITYSSLV+GLSREGKV EA+KFF++LE LG
Sbjct: 467  VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 526

Query: 520  IRPNAITFNSIILGLCKARQTDRAIDFLEYMVSKGCKPTESTYTILVEGVXXXXXXXXXX 341
            IRPNAIT+NSI+LGLCK+RQTDRAIDFL YM+SK CKPTE+TYTIL+EG+          
Sbjct: 527  IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 586

Query: 340  XXXXXLCVRGAIRKSSAQNVAVKM 269
                 LC RG ++KSSA+ VAVKM
Sbjct: 587  DLLNELCSRGLVKKSSAEQVAVKM 610


>emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  865 bits (2234), Expect = 0.0
 Identities = 423/504 (83%), Positives = 462/504 (91%)
 Frame = -3

Query: 1780 NSSRGFEEFQSNNHLRRLVRNGELEEGFNYLEGLVYHGDTPDIIPCTSLIRGFCKIGKTQ 1601
            NSS   EE +SNNHLRRLVRNGELE+GF +LE +VY GD PDIIPCTSLIRGFC+IGKT+
Sbjct: 50   NSSSSIEEHESNNHLRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTK 109

Query: 1600 KATKVLEILEQSGAVPDVITYNVLISGYCKSGEIDNALQLLDRMSVAPDVVTYNTILRSL 1421
            KAT V+EILEQSGAVPDVITYNVLISGYCKSGEIDNALQ+LDRM+VAPDVVTYNTILR+L
Sbjct: 110  KATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTL 169

Query: 1420 CDSGKLKQAMKVLDHQLKRECYPDVFTYTILIEATCKESGVGQAMKLLDEMRNKGCKPDV 1241
            CDSGKLKQAM+VLD QL++ECYPDV TYTILIEATCKESGVGQAMKLLDEMRNKG KPDV
Sbjct: 170  CDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDV 229

Query: 1240 VTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWLDAEKLLAD 1061
            VTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRW+DAEKLL+D
Sbjct: 230  VTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSD 289

Query: 1060 MVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTANSLSYNPLLHGFCKEKK 881
            M+RKGCSPSVVTFNILINFLCR+GLLGRAIDILEKMP HGCT NSLSYNPLLHGFCKEKK
Sbjct: 290  MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 349

Query: 880  MDRAIQYLDVMVSRGCYPDIVTYNTLLTALCKDGKVDIAVKLLNQLGSKGCSPVLITYNT 701
            MDRAI+YLD+MVSRGCYPDIVTYNTLLTALCKDGKVD+AV++LNQL SKGCSPVLITYNT
Sbjct: 350  MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 409

Query: 700  VIDGLAKVGNTEHAVKLLGEMLAKGLQPDIITYSSLVAGLSREGKVQEAMKFFYELERLG 521
            VIDGL+KVG TE A+KLL EM  KGL+PDIITYSSLV+GLSREGKV EA+KFF++LE LG
Sbjct: 410  VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 469

Query: 520  IRPNAITFNSIILGLCKARQTDRAIDFLEYMVSKGCKPTESTYTILVEGVXXXXXXXXXX 341
            IRPNAIT+NSI+LGLCK+RQTDRAIDFL YM+SK CKPTE+TYTIL+EG+          
Sbjct: 470  IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 529

Query: 340  XXXXXLCVRGAIRKSSAQNVAVKM 269
                 LC RG ++KSSA+ VAVKM
Sbjct: 530  DLLNELCSRGLVKKSSAEQVAVKM 553


>ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like
            [Cucumis sativus]
          Length = 665

 Score =  825 bits (2131), Expect = 0.0
 Identities = 398/504 (78%), Positives = 452/504 (89%)
 Frame = -3

Query: 1780 NSSRGFEEFQSNNHLRRLVRNGELEEGFNYLEGLVYHGDTPDIIPCTSLIRGFCKIGKTQ 1601
            N S+  EE ++NNHLRRLVRNGELEEGF +LE +V  GD PDII CTSLIRG CK GKT 
Sbjct: 103  NHSQSSEEVENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTW 162

Query: 1600 KATKVLEILEQSGAVPDVITYNVLISGYCKSGEIDNALQLLDRMSVAPDVVTYNTILRSL 1421
            KAT+V+EILE SGAVPDVITYNVLISGYCK+GEI +ALQLLDRMSV+PDVVTYNTILR+L
Sbjct: 163  KATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTL 222

Query: 1420 CDSGKLKQAMKVLDHQLKRECYPDVFTYTILIEATCKESGVGQAMKLLDEMRNKGCKPDV 1241
            CDSGKLK+AM+VLD Q++RECYPDV TYTILIEATCKESGVGQAMKLLDEMR+KGCKPDV
Sbjct: 223  CDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDV 282

Query: 1240 VTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWLDAEKLLAD 1061
            VTYNVLINGICKEGRLDEAI+FLN+MPSYGCQPNVITHNIILRSMCSTGRW+DAEK LA+
Sbjct: 283  VTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAE 342

Query: 1060 MVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTANSLSYNPLLHGFCKEKK 881
            M+RKGCSPSVVTFNILINFLCRKGL+GRAID+LEKMP+HGCT NSLSYNPLLH  CK+KK
Sbjct: 343  MIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKK 402

Query: 880  MDRAIQYLDVMVSRGCYPDIVTYNTLLTALCKDGKVDIAVKLLNQLGSKGCSPVLITYNT 701
            M+RAI+YLD+MVSRGCYPDIVTYNTLLTALCKDGKVD+AV++LNQLGSKGCSPVLITYNT
Sbjct: 403  MERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNT 462

Query: 700  VIDGLAKVGNTEHAVKLLGEMLAKGLQPDIITYSSLVAGLSREGKVQEAMKFFYELERLG 521
            VIDGL+KVG T+ A+KLL EM  KGL+PDIITYS+LV GLSREGKV EA+ FF++LE +G
Sbjct: 463  VIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMG 522

Query: 520  IRPNAITFNSIILGLCKARQTDRAIDFLEYMVSKGCKPTESTYTILVEGVXXXXXXXXXX 341
            ++PNAIT+NSI+LGLCKARQT RAIDFL YMV++GCKPTE++Y IL+EG+          
Sbjct: 523  VKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEAL 582

Query: 340  XXXXXLCVRGAIRKSSAQNVAVKM 269
                 LC RG ++KSSA+ V VK+
Sbjct: 583  ELLNELCSRGVVKKSSAEQVVVKI 606


>ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like
            [Glycine max]
          Length = 602

 Score =  823 bits (2127), Expect = 0.0
 Identities = 397/505 (78%), Positives = 449/505 (88%)
 Frame = -3

Query: 1783 LNSSRGFEEFQSNNHLRRLVRNGELEEGFNYLEGLVYHGDTPDIIPCTSLIRGFCKIGKT 1604
            +N SR FEEF SN HLR+LVRNGELEEG  +LE ++Y GD PD+I CTSLIRGFC+ GKT
Sbjct: 98   VNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKT 157

Query: 1603 QKATKVLEILEQSGAVPDVITYNVLISGYCKSGEIDNALQLLDRMSVAPDVVTYNTILRS 1424
            +KAT+++EILE SGAVPDVITYNVLI GYCKSGEID AL++L+RMSVAPDVVTYNTILRS
Sbjct: 158  KKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVAPDVVTYNTILRS 217

Query: 1423 LCDSGKLKQAMKVLDHQLKRECYPDVFTYTILIEATCKESGVGQAMKLLDEMRNKGCKPD 1244
            LCDSGKLK+AM+VLD QL+RECYPDV TYTILIEATC +SGVGQAMKLLDEMR KGCKPD
Sbjct: 218  LCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPD 277

Query: 1243 VVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWLDAEKLLA 1064
            VVTYNVLINGICKEGRLDEAIKFLNNMPSYGC+PNVITHNIILRSMCSTGRW+DAE+LL+
Sbjct: 278  VVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLS 337

Query: 1063 DMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTANSLSYNPLLHGFCKEK 884
            DM+RKGCSPSVVTFNILINFLCRK LLGRAID+LEKMPKHGC  NSLSYNPLLHGFC+EK
Sbjct: 338  DMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEK 397

Query: 883  KMDRAIQYLDVMVSRGCYPDIVTYNTLLTALCKDGKVDIAVKLLNQLGSKGCSPVLITYN 704
            KMDRAI+YL++MVSRGCYPDIVTYNTLLTALCKDGKVD AV++LNQL SKGCSPVLITYN
Sbjct: 398  KMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYN 457

Query: 703  TVIDGLAKVGNTEHAVKLLGEMLAKGLQPDIITYSSLVAGLSREGKVQEAMKFFYELERL 524
            TVIDGL KVG TE+AV+LL EM  KGL+PDIITYS+L+ GL REGKV EA+K F+++E L
Sbjct: 458  TVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGL 517

Query: 523  GIRPNAITFNSIILGLCKARQTDRAIDFLEYMVSKGCKPTESTYTILVEGVXXXXXXXXX 344
             I+P+A+T+N+I+LGLCKA+QT RAIDFL YMV KGCKPTE+TYTIL+EG+         
Sbjct: 518  SIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIADEGLAEEA 577

Query: 343  XXXXXXLCVRGAIRKSSAQNVAVKM 269
                  LC RG ++KSSA+ V VKM
Sbjct: 578  LELLNELCSRGFVKKSSAEQVVVKM 602


>ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like
            [Glycine max]
          Length = 603

 Score =  818 bits (2112), Expect = 0.0
 Identities = 395/505 (78%), Positives = 446/505 (88%)
 Frame = -3

Query: 1783 LNSSRGFEEFQSNNHLRRLVRNGELEEGFNYLEGLVYHGDTPDIIPCTSLIRGFCKIGKT 1604
            +N SR FEEF SN HLR+LVRNGELEEG  +LE ++Y GD PD+I CTSLIRGFC+ GKT
Sbjct: 99   VNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKT 158

Query: 1603 QKATKVLEILEQSGAVPDVITYNVLISGYCKSGEIDNALQLLDRMSVAPDVVTYNTILRS 1424
            +KAT+++EILE SGAVPDVITYNVLI GYCKSGEID ALQ+L+RMSVAPDVVTYNTILRS
Sbjct: 159  RKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVAPDVVTYNTILRS 218

Query: 1423 LCDSGKLKQAMKVLDHQLKRECYPDVFTYTILIEATCKESGVGQAMKLLDEMRNKGCKPD 1244
            LCDSGKLK+AM+VLD Q++RECYPDV TYTILIEATC +SGVGQAMKLLDEMR KGCKPD
Sbjct: 219  LCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPD 278

Query: 1243 VVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWLDAEKLLA 1064
            VVTYNVLINGICKEGRLDEAIKFLNNMP YGCQPNVITHNIILRSMCSTGRW+DAE+LLA
Sbjct: 279  VVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLA 338

Query: 1063 DMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTANSLSYNPLLHGFCKEK 884
            DM+RKGCSPSVVTFNILINFLCRK LLGRAID+LEKMPKHGC  NSLSYNPLLHGFC+EK
Sbjct: 339  DMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEK 398

Query: 883  KMDRAIQYLDVMVSRGCYPDIVTYNTLLTALCKDGKVDIAVKLLNQLGSKGCSPVLITYN 704
            KMDRAI+YL++MVSRGCYPDIVTYNTLLTALCKDGK D AV++LNQL SKGCSPVLITYN
Sbjct: 399  KMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYN 458

Query: 703  TVIDGLAKVGNTEHAVKLLGEMLAKGLQPDIITYSSLVAGLSREGKVQEAMKFFYELERL 524
            TVIDGL KVG TE+A +LL EM  KGL+PDIITYS+L+ GL  EGKV EA+K F+++E L
Sbjct: 459  TVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGL 518

Query: 523  GIRPNAITFNSIILGLCKARQTDRAIDFLEYMVSKGCKPTESTYTILVEGVXXXXXXXXX 344
             I+P+A+T+N+I+LGLCKA+QT RAIDFL YMV KGCKPT++TYTIL+EG+         
Sbjct: 519  SIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIADEGLAEEA 578

Query: 343  XXXXXXLCVRGAIRKSSAQNVAVKM 269
                  LC RG ++KSSA+ VAVKM
Sbjct: 579  LELLNELCSRGFVKKSSAEQVAVKM 603