BLASTX nr result

ID: Coptis23_contig00005451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005451
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24037.1| unknown [Picea sitchensis]                              58   7e-07
gb|ABK23280.1| unknown [Picea sitchensis]                              58   7e-07
ref|NP_001142329.1| hypothetical protein [Zea mays] gi|194708238...    58   9e-07
ref|NP_001060809.1| Os08g0109200 [Oryza sativa Japonica Group] g...    57   1e-06
gb|EEC82790.1| hypothetical protein OsI_27542 [Oryza sativa Indi...    57   1e-06

>gb|ABK24037.1| unknown [Picea sitchensis]
          Length = 416

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/40 (65%), Positives = 31/40 (77%)
 Frame = +3

Query: 177 SNLSGYHVSNGPSFMRGTVWWGQPNSPLTIEDFHMPIPKA 296
           S+ SGYH+ NGPS MR  V+W +P  PL+IEDFHMP PKA
Sbjct: 31  SDASGYHLGNGPSSMRAAVFW-EPGRPLSIEDFHMPRPKA 69


>gb|ABK23280.1| unknown [Picea sitchensis]
          Length = 416

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/40 (65%), Positives = 31/40 (77%)
 Frame = +3

Query: 177 SNLSGYHVSNGPSFMRGTVWWGQPNSPLTIEDFHMPIPKA 296
           S+ SGYH+ NGPS MR  V+W +P  PL+IEDFHMP PKA
Sbjct: 31  SDASGYHLGNGPSSMRAAVFW-EPGRPLSIEDFHMPRPKA 69


>ref|NP_001142329.1| hypothetical protein [Zea mays] gi|194708238|gb|ACF88203.1| unknown
           [Zea mays] gi|413921508|gb|AFW61440.1| hypothetical
           protein ZEAMMB73_501219 [Zea mays]
          Length = 417

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/36 (66%), Positives = 30/36 (83%)
 Frame = +3

Query: 189 GYHVSNGPSFMRGTVWWGQPNSPLTIEDFHMPIPKA 296
           GYHV+ GPS+MRG V+W +P  PLT+E+FHMP PKA
Sbjct: 35  GYHVAGGPSYMRGAVFW-EPGRPLTLEEFHMPRPKA 69


>ref|NP_001060809.1| Os08g0109200 [Oryza sativa Japonica Group]
           gi|42408374|dbj|BAD09525.1| putative alcohol
           dehydrogenase (Zn containing)(adh-1) [Oryza sativa
           Japonica Group] gi|113622778|dbj|BAF22723.1|
           Os08g0109200 [Oryza sativa Japonica Group]
           gi|125559893|gb|EAZ05341.1| hypothetical protein
           OsI_27546 [Oryza sativa Indica Group]
           gi|125601940|gb|EAZ41265.1| hypothetical protein
           OsJ_25774 [Oryza sativa Japonica Group]
           gi|215678852|dbj|BAG95289.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 422

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/36 (69%), Positives = 29/36 (80%)
 Frame = +3

Query: 189 GYHVSNGPSFMRGTVWWGQPNSPLTIEDFHMPIPKA 296
           GYHV+ GPSFMRG V+W +P  PLT+EDF MP PKA
Sbjct: 40  GYHVAGGPSFMRGAVFW-EPGRPLTLEDFRMPRPKA 74


>gb|EEC82790.1| hypothetical protein OsI_27542 [Oryza sativa Indica Group]
          Length = 133

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/36 (69%), Positives = 29/36 (80%)
 Frame = +3

Query: 189 GYHVSNGPSFMRGTVWWGQPNSPLTIEDFHMPIPKA 296
           GYHV+ GPSFMRG V+W +P  PLT+EDF MP PKA
Sbjct: 40  GYHVAGGPSFMRGAVFW-EPGRPLTLEDFRMPRPKA 74


Top