BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005449
         (1405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P48496.1|TPIC_SPIOL RecName: Full=Triosephosphate isomerase, ...   496   e-138
ref|XP_002274871.1| PREDICTED: triosephosphate isomerase, chloro...   496   e-138
gb|ADG27841.1| triosephosphate isomerase [Gossypium hirsutum]         488   e-135
ref|NP_179713.1| triosephosphate isomerase [Arabidopsis thaliana...   479   e-133
ref|XP_004147017.1| PREDICTED: triosephosphate isomerase, chloro...   478   e-132

>sp|P48496.1|TPIC_SPIOL RecName: Full=Triosephosphate isomerase, chloroplastic; Short=TIM;
            Short=Triose-phosphate isomerase; Flags: Precursor
            gi|806312|gb|AAA66289.1| triosephosphate isomerase,
            chloroplast isozyme [Spinacia oleracea]
          Length = 322

 Score =  496 bits (1278), Expect = e-138
 Identities = 253/327 (77%), Positives = 288/327 (88%), Gaps = 2/327 (0%)
 Frame = -1

Query: 1267 MALVSTSLASNPKSTAAAVITPPSSSHFSGLRRSCLKFDQSES-RNSFFNQIDSHLRISS 1091
            MA+VSTSLAS   +  +AV     S+ FSGLRRS LK + S S ++SFF  +DSHLR+SS
Sbjct: 1    MAVVSTSLASQITNPNSAV-----STQFSGLRRSFLKLENSVSTQSSFFQNVDSHLRLSS 55

Query: 1090 TKKGC-RGVVAMAGSGTFFVGGNWKCNGTKDSISKLVSDLNNATLEXXXXXXXXXPFVYL 914
            + + C RGVVAMAGSG FFVGGNWKCNGTK+SI+KLVSDLN+ATLE         PFVY+
Sbjct: 56   SSRRCPRGVVAMAGSGKFFVGGNWKCNGTKESITKLVSDLNSATLEADVDVVVAPPFVYI 115

Query: 913  DQVKNTLTDRVEISAQNSWVGKGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQF 734
            DQVK++LT RVEISAQN W+GKGGAFTGEISVEQLKD+GC+WVILGHSERRHVIGE ++F
Sbjct: 116  DQVKSSLTGRVEISAQNCWIGKGGAFTGEISVEQLKDLGCQWVILGHSERRHVIGEQNEF 175

Query: 733  IGKKAAYALSENLKVIACIGERLEEREAGKTFDVCFKQLKAFADSVPSWDDIVVAYEPVW 554
            IGKKAAYAL++ + VIACIGE LEEREAGKTFDVC++QLKAFAD++PSWD++VVAYEPVW
Sbjct: 176  IGKKAAYALNQGVGVIACIGELLEEREAGKTFDVCYQQLKAFADALPSWDNVVVAYEPVW 235

Query: 553  AIGTGKVASPEQAQEVHVAVRDWLKKNVSAEVASKTRIIYGGSVNGSNCAELAKKEDIDG 374
            AIGTGKVASP+QAQEVHVAVRDWLKKNVS EVASKTRIIYGGSVNG NCAELAK+EDIDG
Sbjct: 236  AIGTGKVASPDQAQEVHVAVRDWLKKNVSEEVASKTRIIYGGSVNGGNCAELAKQEDIDG 295

Query: 373  FLVGGASLKGPEFATIINSVTSKKVAA 293
            FLVGGASLKGPEFATI+NSVT+KKVAA
Sbjct: 296  FLVGGASLKGPEFATIVNSVTAKKVAA 322


>ref|XP_002274871.1| PREDICTED: triosephosphate isomerase, chloroplastic-like isoform 1
            [Vitis vinifera]
          Length = 324

 Score =  496 bits (1278), Expect = e-138
 Identities = 259/328 (78%), Positives = 285/328 (86%), Gaps = 4/328 (1%)
 Frame = -1

Query: 1264 ALVSTSLASN---PKSTAAAVITPPSSSHFSGLRRSCLKFDQSESRNSFFNQIDSHLRIS 1094
            A+ STSLAS    PK+T  +  +  S++ FSGLRRS    D S     FF+   S+LRIS
Sbjct: 3    AVTSTSLASQLSTPKATTPSY-SYSSATQFSGLRRSFSNLDHSPQ--PFFS---SNLRIS 56

Query: 1093 ST-KKGCRGVVAMAGSGTFFVGGNWKCNGTKDSISKLVSDLNNATLEXXXXXXXXXPFVY 917
            S+ +K CRG+VAMAGSG FFVGGNWKCNGTKDSISKLVSDLN+A LE         PFVY
Sbjct: 57   SSPRKPCRGIVAMAGSGKFFVGGNWKCNGTKDSISKLVSDLNSAKLEADVDVVVAPPFVY 116

Query: 916  LDQVKNTLTDRVEISAQNSWVGKGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQ 737
            LDQVKN+LTDR+EISAQNSWVGKGGAFTGEISVEQLKDIGC WVILGHSERRHVIGEDDQ
Sbjct: 117  LDQVKNSLTDRIEISAQNSWVGKGGAFTGEISVEQLKDIGCNWVILGHSERRHVIGEDDQ 176

Query: 736  FIGKKAAYALSENLKVIACIGERLEEREAGKTFDVCFKQLKAFADSVPSWDDIVVAYEPV 557
            FIGKKAAYALS+ LKVIACIGE L+EREAGKTFDVCF+Q+KAFAD+VPSWDD+V+AYEPV
Sbjct: 177  FIGKKAAYALSQGLKVIACIGELLQEREAGKTFDVCFQQMKAFADAVPSWDDVVIAYEPV 236

Query: 556  WAIGTGKVASPEQAQEVHVAVRDWLKKNVSAEVASKTRIIYGGSVNGSNCAELAKKEDID 377
            WAIGTGKVA+P QAQEVH+AVRDWLKKNVSAEVASKTRIIYGGSVNGSNC+ELAK+EDID
Sbjct: 237  WAIGTGKVATPLQAQEVHIAVRDWLKKNVSAEVASKTRIIYGGSVNGSNCSELAKQEDID 296

Query: 376  GFLVGGASLKGPEFATIINSVTSKKVAA 293
            GFLVGGASLKGPEFA I+NSVTSKKVAA
Sbjct: 297  GFLVGGASLKGPEFAVIVNSVTSKKVAA 324


>gb|ADG27841.1| triosephosphate isomerase [Gossypium hirsutum]
          Length = 307

 Score =  488 bits (1257), Expect = e-135
 Identities = 243/299 (81%), Positives = 266/299 (88%)
 Frame = -1

Query: 1189 HFSGLRRSCLKFDQSESRNSFFNQIDSHLRISSTKKGCRGVVAMAGSGTFFVGGNWKCNG 1010
            HF+GL RS  K D S+S+ SF   I+S LR++S++K CR V AMAGSG FFVGGNWKCNG
Sbjct: 10   HFNGLHRSSPKLDSSQSQ-SFLQHINSQLRLASSRKPCRAVTAMAGSGKFFVGGNWKCNG 68

Query: 1009 TKDSISKLVSDLNNATLEXXXXXXXXXPFVYLDQVKNTLTDRVEISAQNSWVGKGGAFTG 830
            TKDSI+KLVSDLN+A LE         PFVYLDQV  +LT R+E+SAQNSW+GKGGAFTG
Sbjct: 69   TKDSITKLVSDLNSAKLETDVDVVVSPPFVYLDQVTASLTSRIEVSAQNSWIGKGGAFTG 128

Query: 829  EISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSENLKVIACIGERLEEREA 650
            EISVEQLKDIGCKWVILGHSERRH+IGEDDQFIGKKAAYAL+E L VIACIGE LEEREA
Sbjct: 129  EISVEQLKDIGCKWVILGHSERRHIIGEDDQFIGKKAAYALNEGLGVIACIGELLEEREA 188

Query: 649  GKTFDVCFKQLKAFADSVPSWDDIVVAYEPVWAIGTGKVASPEQAQEVHVAVRDWLKKNV 470
            GKTFDVCF+QLKAFAD VPSWD+IV+AYEPVWAIGTGKVA+P+QAQEVHVAV DWLKKNV
Sbjct: 189  GKTFDVCFRQLKAFADVVPSWDNIVIAYEPVWAIGTGKVATPQQAQEVHVAVHDWLKKNV 248

Query: 469  SAEVASKTRIIYGGSVNGSNCAELAKKEDIDGFLVGGASLKGPEFATIINSVTSKKVAA 293
            S EVASKTRIIYGGSVNGSNCAELAK+EDIDGFLVGGASLKGPEFATI+NSVTSKKVAA
Sbjct: 249  SEEVASKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNSVTSKKVAA 307


>ref|NP_179713.1| triosephosphate isomerase [Arabidopsis thaliana]
            gi|13431953|sp|Q9SKP6.1|TPIC_ARATH RecName:
            Full=Triosephosphate isomerase, chloroplastic; Short=TIM;
            Short=Triose-phosphate isomerase; Flags: Precursor
            gi|7839391|gb|AAF70259.1|AF247559_1 triosephosphate
            isomerase [Arabidopsis thaliana]
            gi|14190441|gb|AAK55701.1|AF378898_1 At2g21170/F26H11.7
            [Arabidopsis thaliana] gi|4803926|gb|AAD29799.1| putative
            triosephosphate isomerase [Arabidopsis thaliana]
            gi|15450569|gb|AAK96462.1| At2g21170/F26H11.7
            [Arabidopsis thaliana] gi|21593477|gb|AAM65444.1|
            putative triosephosphate isomerase [Arabidopsis thaliana]
            gi|330252037|gb|AEC07131.1| triosephosphate isomerase
            [Arabidopsis thaliana]
          Length = 315

 Score =  479 bits (1232), Expect = e-133
 Identities = 246/316 (77%), Positives = 272/316 (86%), Gaps = 6/316 (1%)
 Frame = -1

Query: 1222 AAAVITPPSSSHFSGLRRSCLKFDQS--ESRNSFFNQIDSHLRI----SSTKKGCRGVVA 1061
            A ++  PPS   FSGLRR   K D +   S  SFF++++S  R+    SS+ +  RGVVA
Sbjct: 3    ATSLTAPPS---FSGLRRISPKLDAAAVSSHQSFFHRVNSSTRLVSSSSSSHRSPRGVVA 59

Query: 1060 MAGSGTFFVGGNWKCNGTKDSISKLVSDLNNATLEXXXXXXXXXPFVYLDQVKNTLTDRV 881
            MAGSG FFVGGNWKCNGTKDSI+KL+SDLN+ATLE         PFVY+DQVK++LTDR+
Sbjct: 60   MAGSGKFFVGGNWKCNGTKDSIAKLISDLNSATLEADVDVVVSPPFVYIDQVKSSLTDRI 119

Query: 880  EISAQNSWVGKGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSE 701
            +IS QNSWVGKGGAFTGEISVEQLKD+GCKWVILGHSERRHVIGE D+FIGKKAAYALSE
Sbjct: 120  DISGQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYALSE 179

Query: 700  NLKVIACIGERLEEREAGKTFDVCFKQLKAFADSVPSWDDIVVAYEPVWAIGTGKVASPE 521
             L VIACIGE+LEEREAGKTFDVCF QLKAFAD+VPSWD+IVVAYEPVWAIGTGKVASP+
Sbjct: 180  GLGVIACIGEKLEEREAGKTFDVCFAQLKAFADAVPSWDNIVVAYEPVWAIGTGKVASPQ 239

Query: 520  QAQEVHVAVRDWLKKNVSAEVASKTRIIYGGSVNGSNCAELAKKEDIDGFLVGGASLKGP 341
            QAQEVHVAVR WLKKNVS EVASKTRIIYGGSVNG N AELAK+EDIDGFLVGGASLKGP
Sbjct: 240  QAQEVHVAVRGWLKKNVSEEVASKTRIIYGGSVNGGNSAELAKEEDIDGFLVGGASLKGP 299

Query: 340  EFATIINSVTSKKVAA 293
            EFATI+NSVTSKKVAA
Sbjct: 300  EFATIVNSVTSKKVAA 315


>ref|XP_004147017.1| PREDICTED: triosephosphate isomerase, chloroplastic-like [Cucumis
            sativus] gi|449489711|ref|XP_004158393.1| PREDICTED:
            triosephosphate isomerase, chloroplastic-like [Cucumis
            sativus]
          Length = 306

 Score =  478 bits (1231), Expect = e-132
 Identities = 246/324 (75%), Positives = 271/324 (83%)
 Frame = -1

Query: 1267 MALVSTSLASNPKSTAAAVITPPSSSHFSGLRRSCLKFDQSESRNSFFNQIDSHLRISST 1088
            MA VSTSLAS                 FS LR S    D S   +S F+ + S +R++S+
Sbjct: 1    MAAVSTSLASR----------------FSPLRFSSSNSDIS---HSLFHNVHSQIRLASS 41

Query: 1087 KKGCRGVVAMAGSGTFFVGGNWKCNGTKDSISKLVSDLNNATLEXXXXXXXXXPFVYLDQ 908
            +KG RGVV MAGSG FFVGGNWKCNGTK+SI+KLV+DLNNA LE         PFVY++Q
Sbjct: 42   RKGSRGVVTMAGSGKFFVGGNWKCNGTKESIAKLVADLNNAKLEDDVDVVVAPPFVYIEQ 101

Query: 907  VKNTLTDRVEISAQNSWVGKGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIG 728
            VK++LT R+EISAQNSWV KGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIG
Sbjct: 102  VKSSLTSRIEISAQNSWVSKGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIG 161

Query: 727  KKAAYALSENLKVIACIGERLEEREAGKTFDVCFKQLKAFADSVPSWDDIVVAYEPVWAI 548
            KKAAYALSE L VIACIGE LEEREAGKTFDVCF+QLKA+AD+VPSWD IV+AYEPVWAI
Sbjct: 162  KKAAYALSEGLGVIACIGELLEEREAGKTFDVCFQQLKAYADAVPSWDSIVIAYEPVWAI 221

Query: 547  GTGKVASPEQAQEVHVAVRDWLKKNVSAEVASKTRIIYGGSVNGSNCAELAKKEDIDGFL 368
            GTGKVA+PEQAQEVH A+RDWLKKNVS+EVASKTRIIYGGSVNGSNCAELAKKEDIDGFL
Sbjct: 222  GTGKVATPEQAQEVHAAIRDWLKKNVSSEVASKTRIIYGGSVNGSNCAELAKKEDIDGFL 281

Query: 367  VGGASLKGPEFATIINSVTSKKVA 296
            VGGASLKGPEF TI+NSVT+KKVA
Sbjct: 282  VGGASLKGPEFGTIVNSVTAKKVA 305