BLASTX nr result
ID: Coptis23_contig00005447
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00005447 (703 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3... 203 3e-50 emb|CBI39697.3| unnamed protein product [Vitis vinifera] 203 3e-50 ref|XP_003518544.1| PREDICTED: ABC transporter C family member 3... 202 4e-50 ref|XP_002303920.1| multidrug resistance protein ABC transporter... 202 4e-50 gb|AFK47609.1| unknown [Lotus japonicus] 202 5e-50 >ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera] Length = 1488 Score = 203 bits (516), Expect = 3e-50 Identities = 106/143 (74%), Positives = 113/143 (79%) Frame = -3 Query: 701 DEQIWEALDKCQLGNEVRKKEGKLDSTVTENGENWSMGQRQLVCXXXXXXXXXXXXXLDE 522 DEQIWEALDKCQLG+EVRKKEGKLDS VTENGENWSMGQRQLVC LDE Sbjct: 1341 DEQIWEALDKCQLGDEVRKKEGKLDSAVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDE 1400 Query: 521 ATASVDTATDNLIQQTLRQHFSDSTVITIAHRITXXXXXXXXXXXDHGLIMEYDSPSKLL 342 ATASVDTATDNLIQQTLRQHF DSTVITIAHRIT DHGL+ EYD+P++LL Sbjct: 1401 ATASVDTATDNLIQQTLRQHFVDSTVITIAHRITSVLDSDMVLLLDHGLVEEYDTPTRLL 1460 Query: 341 EDKSSLFSKLVAEYTARSNSSFE 273 E+KSS F+KLVAEYT RSNSS E Sbjct: 1461 ENKSSSFAKLVAEYTVRSNSSLE 1483 >emb|CBI39697.3| unnamed protein product [Vitis vinifera] Length = 1284 Score = 203 bits (516), Expect = 3e-50 Identities = 106/143 (74%), Positives = 113/143 (79%) Frame = -3 Query: 701 DEQIWEALDKCQLGNEVRKKEGKLDSTVTENGENWSMGQRQLVCXXXXXXXXXXXXXLDE 522 DEQIWEALDKCQLG+EVRKKEGKLDS VTENGENWSMGQRQLVC LDE Sbjct: 1137 DEQIWEALDKCQLGDEVRKKEGKLDSAVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDE 1196 Query: 521 ATASVDTATDNLIQQTLRQHFSDSTVITIAHRITXXXXXXXXXXXDHGLIMEYDSPSKLL 342 ATASVDTATDNLIQQTLRQHF DSTVITIAHRIT DHGL+ EYD+P++LL Sbjct: 1197 ATASVDTATDNLIQQTLRQHFVDSTVITIAHRITSVLDSDMVLLLDHGLVEEYDTPTRLL 1256 Query: 341 EDKSSLFSKLVAEYTARSNSSFE 273 E+KSS F+KLVAEYT RSNSS E Sbjct: 1257 ENKSSSFAKLVAEYTVRSNSSLE 1279 >ref|XP_003518544.1| PREDICTED: ABC transporter C family member 3-like [Glycine max] Length = 2054 Score = 202 bits (515), Expect = 4e-50 Identities = 106/143 (74%), Positives = 113/143 (79%) Frame = -3 Query: 701 DEQIWEALDKCQLGNEVRKKEGKLDSTVTENGENWSMGQRQLVCXXXXXXXXXXXXXLDE 522 DEQIWEALDKCQLG+EVRKKEGKLDS VTENGENWSMGQRQLVC LDE Sbjct: 1907 DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDE 1966 Query: 521 ATASVDTATDNLIQQTLRQHFSDSTVITIAHRITXXXXXXXXXXXDHGLIMEYDSPSKLL 342 ATASVDTATDNLIQQTLRQHFSDSTVITIAHRIT GLI EYD+P++LL Sbjct: 1967 ATASVDTATDNLIQQTLRQHFSDSTVITIAHRITSVLDSDMVLLLSQGLIEEYDTPTRLL 2026 Query: 341 EDKSSLFSKLVAEYTARSNSSFE 273 E+KSS F++LVAEYT RSNSSFE Sbjct: 2027 ENKSSSFAQLVAEYTMRSNSSFE 2049 >ref|XP_002303920.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] gi|222841352|gb|EEE78899.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] Length = 1305 Score = 202 bits (515), Expect = 4e-50 Identities = 106/147 (72%), Positives = 113/147 (76%) Frame = -3 Query: 701 DEQIWEALDKCQLGNEVRKKEGKLDSTVTENGENWSMGQRQLVCXXXXXXXXXXXXXLDE 522 DEQIWE LDKCQLG+EVRKKE KLDSTV ENGENWSMGQRQLVC LDE Sbjct: 1157 DEQIWEVLDKCQLGDEVRKKERKLDSTVIENGENWSMGQRQLVCLGRVLLKKSKVLVLDE 1216 Query: 521 ATASVDTATDNLIQQTLRQHFSDSTVITIAHRITXXXXXXXXXXXDHGLIMEYDSPSKLL 342 ATASVDTATDNLIQQTLRQHFSD TVITIAHRIT HGLI EYDSP++LL Sbjct: 1217 ATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVLDSDMVLLLSHGLIEEYDSPTRLL 1276 Query: 341 EDKSSLFSKLVAEYTARSNSSFETAIG 261 E+KSS FS+LVAEYT RSN+SFE + G Sbjct: 1277 ENKSSSFSQLVAEYTVRSNTSFEKSAG 1303 >gb|AFK47609.1| unknown [Lotus japonicus] Length = 510 Score = 202 bits (514), Expect = 5e-50 Identities = 105/146 (71%), Positives = 116/146 (79%) Frame = -3 Query: 701 DEQIWEALDKCQLGNEVRKKEGKLDSTVTENGENWSMGQRQLVCXXXXXXXXXXXXXLDE 522 DEQIWEALDKCQLG+EVRKKEGKLDSTV+E+GENWSMGQRQLVC LDE Sbjct: 363 DEQIWEALDKCQLGDEVRKKEGKLDSTVSEDGENWSMGQRQLVCLGRVLLKKSKVLVLDE 422 Query: 521 ATASVDTATDNLIQQTLRQHFSDSTVITIAHRITXXXXXXXXXXXDHGLIMEYDSPSKLL 342 ATASVDTATDNLIQQTLRQHFS+STVITIAHRIT GLI EYDSP+KLL Sbjct: 423 ATASVDTATDNLIQQTLRQHFSESTVITIAHRITSVIDSDMVLLLSQGLIEEYDSPAKLL 482 Query: 341 EDKSSLFSKLVAEYTARSNSSFETAI 264 EDKSS F++LVAEYT R++SSFE ++ Sbjct: 483 EDKSSSFAQLVAEYTMRASSSFEKSV 508