BLASTX nr result

ID: Coptis23_contig00005447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005447
         (703 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3...   203   3e-50
emb|CBI39697.3| unnamed protein product [Vitis vinifera]              203   3e-50
ref|XP_003518544.1| PREDICTED: ABC transporter C family member 3...   202   4e-50
ref|XP_002303920.1| multidrug resistance protein ABC transporter...   202   4e-50
gb|AFK47609.1| unknown [Lotus japonicus]                              202   5e-50

>ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score =  203 bits (516), Expect = 3e-50
 Identities = 106/143 (74%), Positives = 113/143 (79%)
 Frame = -3

Query: 701  DEQIWEALDKCQLGNEVRKKEGKLDSTVTENGENWSMGQRQLVCXXXXXXXXXXXXXLDE 522
            DEQIWEALDKCQLG+EVRKKEGKLDS VTENGENWSMGQRQLVC             LDE
Sbjct: 1341 DEQIWEALDKCQLGDEVRKKEGKLDSAVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDE 1400

Query: 521  ATASVDTATDNLIQQTLRQHFSDSTVITIAHRITXXXXXXXXXXXDHGLIMEYDSPSKLL 342
            ATASVDTATDNLIQQTLRQHF DSTVITIAHRIT           DHGL+ EYD+P++LL
Sbjct: 1401 ATASVDTATDNLIQQTLRQHFVDSTVITIAHRITSVLDSDMVLLLDHGLVEEYDTPTRLL 1460

Query: 341  EDKSSLFSKLVAEYTARSNSSFE 273
            E+KSS F+KLVAEYT RSNSS E
Sbjct: 1461 ENKSSSFAKLVAEYTVRSNSSLE 1483


>emb|CBI39697.3| unnamed protein product [Vitis vinifera]
          Length = 1284

 Score =  203 bits (516), Expect = 3e-50
 Identities = 106/143 (74%), Positives = 113/143 (79%)
 Frame = -3

Query: 701  DEQIWEALDKCQLGNEVRKKEGKLDSTVTENGENWSMGQRQLVCXXXXXXXXXXXXXLDE 522
            DEQIWEALDKCQLG+EVRKKEGKLDS VTENGENWSMGQRQLVC             LDE
Sbjct: 1137 DEQIWEALDKCQLGDEVRKKEGKLDSAVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDE 1196

Query: 521  ATASVDTATDNLIQQTLRQHFSDSTVITIAHRITXXXXXXXXXXXDHGLIMEYDSPSKLL 342
            ATASVDTATDNLIQQTLRQHF DSTVITIAHRIT           DHGL+ EYD+P++LL
Sbjct: 1197 ATASVDTATDNLIQQTLRQHFVDSTVITIAHRITSVLDSDMVLLLDHGLVEEYDTPTRLL 1256

Query: 341  EDKSSLFSKLVAEYTARSNSSFE 273
            E+KSS F+KLVAEYT RSNSS E
Sbjct: 1257 ENKSSSFAKLVAEYTVRSNSSLE 1279


>ref|XP_003518544.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 2054

 Score =  202 bits (515), Expect = 4e-50
 Identities = 106/143 (74%), Positives = 113/143 (79%)
 Frame = -3

Query: 701  DEQIWEALDKCQLGNEVRKKEGKLDSTVTENGENWSMGQRQLVCXXXXXXXXXXXXXLDE 522
            DEQIWEALDKCQLG+EVRKKEGKLDS VTENGENWSMGQRQLVC             LDE
Sbjct: 1907 DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDE 1966

Query: 521  ATASVDTATDNLIQQTLRQHFSDSTVITIAHRITXXXXXXXXXXXDHGLIMEYDSPSKLL 342
            ATASVDTATDNLIQQTLRQHFSDSTVITIAHRIT             GLI EYD+P++LL
Sbjct: 1967 ATASVDTATDNLIQQTLRQHFSDSTVITIAHRITSVLDSDMVLLLSQGLIEEYDTPTRLL 2026

Query: 341  EDKSSLFSKLVAEYTARSNSSFE 273
            E+KSS F++LVAEYT RSNSSFE
Sbjct: 2027 ENKSSSFAQLVAEYTMRSNSSFE 2049


>ref|XP_002303920.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222841352|gb|EEE78899.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1305

 Score =  202 bits (515), Expect = 4e-50
 Identities = 106/147 (72%), Positives = 113/147 (76%)
 Frame = -3

Query: 701  DEQIWEALDKCQLGNEVRKKEGKLDSTVTENGENWSMGQRQLVCXXXXXXXXXXXXXLDE 522
            DEQIWE LDKCQLG+EVRKKE KLDSTV ENGENWSMGQRQLVC             LDE
Sbjct: 1157 DEQIWEVLDKCQLGDEVRKKERKLDSTVIENGENWSMGQRQLVCLGRVLLKKSKVLVLDE 1216

Query: 521  ATASVDTATDNLIQQTLRQHFSDSTVITIAHRITXXXXXXXXXXXDHGLIMEYDSPSKLL 342
            ATASVDTATDNLIQQTLRQHFSD TVITIAHRIT            HGLI EYDSP++LL
Sbjct: 1217 ATASVDTATDNLIQQTLRQHFSDCTVITIAHRITSVLDSDMVLLLSHGLIEEYDSPTRLL 1276

Query: 341  EDKSSLFSKLVAEYTARSNSSFETAIG 261
            E+KSS FS+LVAEYT RSN+SFE + G
Sbjct: 1277 ENKSSSFSQLVAEYTVRSNTSFEKSAG 1303


>gb|AFK47609.1| unknown [Lotus japonicus]
          Length = 510

 Score =  202 bits (514), Expect = 5e-50
 Identities = 105/146 (71%), Positives = 116/146 (79%)
 Frame = -3

Query: 701 DEQIWEALDKCQLGNEVRKKEGKLDSTVTENGENWSMGQRQLVCXXXXXXXXXXXXXLDE 522
           DEQIWEALDKCQLG+EVRKKEGKLDSTV+E+GENWSMGQRQLVC             LDE
Sbjct: 363 DEQIWEALDKCQLGDEVRKKEGKLDSTVSEDGENWSMGQRQLVCLGRVLLKKSKVLVLDE 422

Query: 521 ATASVDTATDNLIQQTLRQHFSDSTVITIAHRITXXXXXXXXXXXDHGLIMEYDSPSKLL 342
           ATASVDTATDNLIQQTLRQHFS+STVITIAHRIT             GLI EYDSP+KLL
Sbjct: 423 ATASVDTATDNLIQQTLRQHFSESTVITIAHRITSVIDSDMVLLLSQGLIEEYDSPAKLL 482

Query: 341 EDKSSLFSKLVAEYTARSNSSFETAI 264
           EDKSS F++LVAEYT R++SSFE ++
Sbjct: 483 EDKSSSFAQLVAEYTMRASSSFEKSV 508


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