BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005446
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527362.1| E3 ubiquitin protein ligase upl2, putative [...   270   7e-71
ref|XP_002301117.1| predicted protein [Populus trichocarpa] gi|2...   266   1e-69
ref|XP_002283711.2| PREDICTED: E3 ubiquitin-protein ligase UPL2-...   265   3e-69
emb|CBI19293.3| unnamed protein product [Vitis vinifera]              265   3e-69
ref|XP_003615335.1| E3 ubiquitin-protein ligase HUWE1 [Medicago ...   265   4e-69

>ref|XP_002527362.1| E3 ubiquitin protein ligase upl2, putative [Ricinus communis]
            gi|223533281|gb|EEF35034.1| E3 ubiquitin protein ligase
            upl2, putative [Ricinus communis]
          Length = 3666

 Score =  270 bits (691), Expect = 7e-71
 Identities = 131/136 (96%), Positives = 135/136 (99%)
 Frame = -2

Query: 410  LEGFNELISRDLISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPIIQWFWEVVQ 231
            +EGFNELI RDLISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASP+IQWFWEVVQ
Sbjct: 3519 MEGFNELILRDLISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQ 3578

Query: 230  GFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQRFQIHKAYGSPEHLPSAHTCFNQLD 51
            GFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQ+FQIHKAYGSP+HLPSAHTCFNQLD
Sbjct: 3579 GFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSPDHLPSAHTCFNQLD 3638

Query: 50   LPEYPSKQHLEERLLL 3
            LPEYPSKQHLEERLLL
Sbjct: 3639 LPEYPSKQHLEERLLL 3654


>ref|XP_002301117.1| predicted protein [Populus trichocarpa] gi|222842843|gb|EEE80390.1|
           predicted protein [Populus trichocarpa]
          Length = 471

 Score =  266 bits (680), Expect = 1e-69
 Identities = 129/136 (94%), Positives = 133/136 (97%)
 Frame = -2

Query: 410 LEGFNELISRDLISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPIIQWFWEVVQ 231
           LEGF ELISR+LISIFNDKELELLISGLPDIDLDDMR NTEYSGYS ASP+IQWFWEVVQ
Sbjct: 324 LEGFTELISRELISIFNDKELELLISGLPDIDLDDMRTNTEYSGYSPASPVIQWFWEVVQ 383

Query: 230 GFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQRFQIHKAYGSPEHLPSAHTCFNQLD 51
           GFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQ+FQIHKAYGSP+HLPSAHTCFNQLD
Sbjct: 384 GFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSPDHLPSAHTCFNQLD 443

Query: 50  LPEYPSKQHLEERLLL 3
           LPEYPSKQHLEERLLL
Sbjct: 444 LPEYPSKQHLEERLLL 459


>ref|XP_002283711.2| PREDICTED: E3 ubiquitin-protein ligase UPL2-like [Vitis vinifera]
          Length = 3750

 Score =  265 bits (677), Expect = 3e-69
 Identities = 129/136 (94%), Positives = 132/136 (97%)
 Frame = -2

Query: 410  LEGFNELISRDLISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPIIQWFWEVVQ 231
            LEGFNELI RDLISIFNDKELELLISGLPDIDLDDMRANTEYSGYS ASP+IQWFWEVVQ
Sbjct: 3603 LEGFNELIPRDLISIFNDKELELLISGLPDIDLDDMRANTEYSGYSPASPVIQWFWEVVQ 3662

Query: 230  GFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQRFQIHKAYGSPEHLPSAHTCFNQLD 51
              SKEDKARLLQFVTGTSKVPLEGFSALQGISGSQ+FQIHKAYGSP+HLPSAHTCFNQLD
Sbjct: 3663 SLSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSPDHLPSAHTCFNQLD 3722

Query: 50   LPEYPSKQHLEERLLL 3
            LPEYPSKQHLEERLLL
Sbjct: 3723 LPEYPSKQHLEERLLL 3738


>emb|CBI19293.3| unnamed protein product [Vitis vinifera]
          Length = 1824

 Score =  265 bits (677), Expect = 3e-69
 Identities = 129/136 (94%), Positives = 132/136 (97%)
 Frame = -2

Query: 410  LEGFNELISRDLISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPIIQWFWEVVQ 231
            LEGFNELI RDLISIFNDKELELLISGLPDIDLDDMRANTEYSGYS ASP+IQWFWEVVQ
Sbjct: 1677 LEGFNELIPRDLISIFNDKELELLISGLPDIDLDDMRANTEYSGYSPASPVIQWFWEVVQ 1736

Query: 230  GFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQRFQIHKAYGSPEHLPSAHTCFNQLD 51
              SKEDKARLLQFVTGTSKVPLEGFSALQGISGSQ+FQIHKAYGSP+HLPSAHTCFNQLD
Sbjct: 1737 SLSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSPDHLPSAHTCFNQLD 1796

Query: 50   LPEYPSKQHLEERLLL 3
            LPEYPSKQHLEERLLL
Sbjct: 1797 LPEYPSKQHLEERLLL 1812


>ref|XP_003615335.1| E3 ubiquitin-protein ligase HUWE1 [Medicago truncatula]
            gi|355516670|gb|AES98293.1| E3 ubiquitin-protein ligase
            HUWE1 [Medicago truncatula]
          Length = 3655

 Score =  265 bits (676), Expect = 4e-69
 Identities = 128/136 (94%), Positives = 134/136 (98%)
 Frame = -2

Query: 410  LEGFNELISRDLISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPIIQWFWEVVQ 231
            LEGF+ELI R+LISIFNDKELELLISGLPDIDLDD+RANTEYSGYSAASP+IQWFWEVVQ
Sbjct: 3508 LEGFSELIPRELISIFNDKELELLISGLPDIDLDDLRANTEYSGYSAASPVIQWFWEVVQ 3567

Query: 230  GFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQRFQIHKAYGSPEHLPSAHTCFNQLD 51
            G SKEDKARLLQFVTGTSKVPLEGFSALQGISGSQ+FQIHKAYGSP+HLPSAHTCFNQLD
Sbjct: 3568 GLSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSPDHLPSAHTCFNQLD 3627

Query: 50   LPEYPSKQHLEERLLL 3
            LPEYPSKQHLEERLLL
Sbjct: 3628 LPEYPSKQHLEERLLL 3643