BLASTX nr result

ID: Coptis23_contig00005444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005444
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321636.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
gb|ABK96228.1| unknown [Populus trichocarpa x Populus deltoides]       60   2e-07
ref|XP_002318072.1| predicted protein [Populus trichocarpa] gi|2...    60   3e-07
gb|ABK94327.1| unknown [Populus trichocarpa] gi|118488675|gb|ABK...    60   3e-07

>ref|XP_002321636.1| predicted protein [Populus trichocarpa] gi|222868632|gb|EEF05763.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
 Frame = -3

Query: 462 TDGYHVRVTKTEWTPSTID-VPHYPNLHFVFNNKAHEDLYGNRYEEQVVPKKAAEKVHVT 286
           +D YH  ++K    PS +   P YP++   FNNK +             P K+ +KV VT
Sbjct: 19  SDDYHAYISKLSRMPSVLHGAPQYPSVRKAFNNKRN-------------PTKSPKKVQVT 65

Query: 285 KHVHYEQINEGNGRMTKIEEDINYEADDFIKRKHRALELSK 163
           + V   + N GN +   IEE +++EA+ FI++KH+ LEL K
Sbjct: 66  EQVQIIEQN-GNQKSEVIEETVDHEAEGFIQQKHKGLELCK 105


>gb|ABK96228.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 129

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
 Frame = -3

Query: 453 YHVRVTKTEWTPSTID-VPHYPNLHFVFNNKAHEDLYGNRYEEQVVPKK----AAEKVHV 289
           YH  +++    PS I   P YP++H  FNNK  ++   N   +  V KK    + +KV V
Sbjct: 22  YHDYISRLSKMPSIIHGAPQYPSVHKAFNNKVTQEEEVNEARQDNVNKKNPTRSTKKVRV 81

Query: 288 TKHVHYEQINEGNGRMTKIEEDINYEADDFIKRKHRALELSK 163
            + V     N GN +   IEED++ EAD FIK+K +  EL K
Sbjct: 82  KEQVQVIDQN-GNRKSEDIEEDVDAEADGFIKQKQKGFELCK 122


>ref|XP_002318072.1| predicted protein [Populus trichocarpa] gi|222858745|gb|EEE96292.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
 Frame = -3

Query: 453 YHVRVTKTEWTPSTID-VPHYPNLHFVFNNKAHEDLYGNRYEEQVVPKK----AAEKVHV 289
           YH  +++    PS I   P YP++H  FNNK  ++   N   +  V KK    + +KV V
Sbjct: 53  YHDYISRLSKMPSIIHGAPQYPSVHKAFNNKVTQEEEVNEARQDNVNKKNPARSTKKVRV 112

Query: 288 TKHVHYEQINEGNGRMTKIEEDINYEADDFIKRKHRALELSK 163
            + V     N GN +   IEED++ EAD FIK+K +  EL K
Sbjct: 113 KEQVQVIDQN-GNRKSEDIEEDVDDEADGFIKQKQKGFELCK 153


>gb|ABK94327.1| unknown [Populus trichocarpa] gi|118488675|gb|ABK96149.1| unknown
           [Populus trichocarpa]
          Length = 129

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
 Frame = -3

Query: 453 YHVRVTKTEWTPSTID-VPHYPNLHFVFNNKAHEDLYGNRYEEQVVPKK----AAEKVHV 289
           YH  +++    PS I   P YP++H  FNNK  ++   N   +  V KK    + +KV V
Sbjct: 22  YHDYISRLSKMPSIIHGAPQYPSVHKAFNNKVTQEEEVNEARQDNVNKKNPARSTKKVRV 81

Query: 288 TKHVHYEQINEGNGRMTKIEEDINYEADDFIKRKHRALELSK 163
            + V     N GN +   IEED++ EAD FIK+K +  EL K
Sbjct: 82  KEQVQVIDQN-GNRKSEDIEEDVDDEADGFIKQKQKGFELCK 122


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