BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005443
         (1878 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606390.1| DEAD-box ATP-dependent RNA helicase [Medicag...    91   3e-56
ref|XP_003547512.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...    98   5e-55
ref|XP_002526935.1| dead box ATP-dependent RNA helicase, putativ...    99   3e-54
ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   115   3e-52
ref|XP_003533799.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   101   2e-49

>ref|XP_003606390.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355507445|gb|AES88587.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 613

 Score = 90.5 bits (223), Expect(4) = 3e-56
 Identities = 64/139 (46%), Positives = 79/139 (56%), Gaps = 23/139 (16%)
 Frame = +2

Query: 323 SDVDDGSE--FIGKLPNFSEADYNLPTQLIQRYVKVSCGSRLVILLSILRNLNEREAASQ 496
           SD D+ +E     K+P      Y +P QLIQRY+KV CGSRL ILLSIL++L ERE  SQ
Sbjct: 289 SDCDEDNEDTHSSKIPAIGA--YKVPEQLIQRYMKVPCGSRLAILLSILKHLFERE-PSQ 345

Query: 497 KVVVFFSTC--VDF------------YPKLELHQK------KAFRLHGNMEHEGRRTAFQ 616
           KVV+FFSTC  VDF            YP+ E   +      K  RLHGNME E R T+FQ
Sbjct: 346 KVVLFFSTCDAVDFHYSLITEFLFSSYPQTEEGNRTMFLGCKTLRLHGNMEQEDRTTSFQ 405

Query: 617 GLK-QRNQLYCCAQMLLRG 670
             K +++ L     +  RG
Sbjct: 406 AFKTEKSALLLSTDVSARG 424



 Score = 77.0 bits (188), Expect(4) = 3e-56
 Identities = 38/43 (88%), Positives = 39/43 (90%)
 Frame = +1

Query: 19  TCELRLQVHEILQKLLHHFH*IVPGYVMGGESRSKEKARLRKG 147
           T EL LQVHEILQKLLH FH IVPGY+MGGESRSKEKARLRKG
Sbjct: 127 TRELCLQVHEILQKLLHRFHWIVPGYIMGGESRSKEKARLRKG 169



 Score = 68.6 bits (166), Expect(4) = 3e-56
 Identities = 37/61 (60%), Positives = 45/61 (73%)
 Frame = +3

Query: 144 RILELGYGKEIEEILGFLGSRKDGGVSKENAFSKDSKPQRQNLLLSAT*NDKVNILSRSD 323
           RILELG+GKEI+EIL  LGS K G   +E+   + SK QRQNLLLSAT N+KVN L++  
Sbjct: 205 RILELGFGKEIQEILNLLGSMKTGHDDQESGVPRPSKFQRQNLLLSATLNEKVNHLAKIS 264

Query: 324 L 326
           L
Sbjct: 265 L 265



 Score = 52.8 bits (125), Expect(4) = 3e-56
 Identities = 25/33 (75%), Positives = 26/33 (78%)
 Frame = +3

Query: 669 GLRFPNVTCIIQYDSPGEASEYVHRYL*TALFG 767
           GL FPNV CIIQYDSPGEA+EYVHR   TA  G
Sbjct: 424 GLDFPNVRCIIQYDSPGEATEYVHRVGRTARLG 456


>ref|XP_003547512.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           17-like [Glycine max]
          Length = 591

 Score = 98.2 bits (243), Expect(4) = 5e-55
 Identities = 66/143 (46%), Positives = 83/143 (58%), Gaps = 20/143 (13%)
 Frame = +2

Query: 302 KHLKSIGSDVDDGSEFIGKLPNFSEADYNLPTQLIQRYVKVSCGSRLVILLSILRNLNER 481
           K L    SD D   ++  K+P     DY +P QLIQRY+KV CGSRL +LLSIL++L ER
Sbjct: 267 KRLDPSESDEDSEDKYYSKVPTVG--DYKVPLQLIQRYMKVPCGSRLPVLLSILKHLFER 324

Query: 482 EAASQKVVVFFSTC--VDF------------YPKLELHQK-----KAFRLHGNMEHEGRR 604
           E  SQKVV+FFSTC  VDF            Y + E  Q+     K FRLHGNM+ E RR
Sbjct: 325 E-PSQKVVLFFSTCDAVDFHYSLLSEFQFSSYSQTEGVQQVFLGCKTFRLHGNMQQEDRR 383

Query: 605 TAFQGLK-QRNQLYCCAQMLLRG 670
           T+FQ  K +++ L     +  RG
Sbjct: 384 TSFQAFKTEKSALLLSTDVSARG 406



 Score = 72.8 bits (177), Expect(4) = 5e-55
 Identities = 36/43 (83%), Positives = 39/43 (90%)
 Frame = +1

Query: 19  TCELRLQVHEILQKLLHHFH*IVPGYVMGGESRSKEKARLRKG 147
           T EL LQV+EILQKLLH FH IVPGY+MGGE+RSKEKARLRKG
Sbjct: 109 TRELCLQVYEILQKLLHWFHWIVPGYIMGGENRSKEKARLRKG 151



 Score = 67.4 bits (163), Expect(4) = 5e-55
 Identities = 36/61 (59%), Positives = 43/61 (70%)
 Frame = +3

Query: 144 RILELGYGKEIEEILGFLGSRKDGGVSKENAFSKDSKPQRQNLLLSAT*NDKVNILSRSD 323
           RIL+LG+GK IEEIL  LGSRK G   K+N     SK QRQNLLLS T N++VN L++  
Sbjct: 187 RILKLGFGKNIEEILDLLGSRKTGHDDKKNTVPTHSKMQRQNLLLSTTLNERVNHLAKMS 246

Query: 324 L 326
           L
Sbjct: 247 L 247



 Score = 46.2 bits (108), Expect(4) = 5e-55
 Identities = 23/33 (69%), Positives = 24/33 (72%)
 Frame = +3

Query: 669 GLRFPNVTCIIQYDSPGEASEYVHRYL*TALFG 767
           GL FP V  IIQYDSPGEA+EYVHR   TA  G
Sbjct: 406 GLDFPKVRFIIQYDSPGEATEYVHRVGRTARLG 438


>ref|XP_002526935.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223533687|gb|EEF35422.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 603

 Score = 99.0 bits (245), Expect(4) = 3e-54
 Identities = 61/128 (47%), Positives = 76/128 (59%), Gaps = 20/128 (15%)
 Frame = +2

Query: 302 KHLKSIGSDVDDGSEFIGKLPNFSEADYNLPTQLIQRYVKVSCGSRLVILLSILRNLNER 481
           +H KS+ SD DD  E   K+   S  D+ +P QL+Q+YVKV CGSRL  LLSIL++L E+
Sbjct: 273 EHTKSLKSDADDELEHPSKVLKPSTGDFKVPVQLVQKYVKVPCGSRLATLLSILKHLFEK 332

Query: 482 EAASQKVVVFFSTC--VDFYPKL-----------------ELHQK-KAFRLHGNMEHEGR 601
             ASQK+VVFFSTC  VDF+  L                 E+  + K FRLHGNM+ E R
Sbjct: 333 R-ASQKIVVFFSTCDAVDFHYSLLSEFRFSCTSQSEAEAAEMFLRCKTFRLHGNMKQEDR 391

Query: 602 RTAFQGLK 625
           R  FQ  K
Sbjct: 392 RDTFQAFK 399



 Score = 72.0 bits (175), Expect(4) = 3e-54
 Identities = 36/43 (83%), Positives = 38/43 (88%)
 Frame = +1

Query: 19  TCELRLQVHEILQKLLHHFH*IVPGYVMGGESRSKEKARLRKG 147
           T EL LQV+EILQ LLH FH IVPGY+MGGESRSKEKARLRKG
Sbjct: 115 TRELCLQVYEILQGLLHRFHWIVPGYIMGGESRSKEKARLRKG 157



 Score = 65.9 bits (159), Expect(4) = 3e-54
 Identities = 38/61 (62%), Positives = 42/61 (68%)
 Frame = +3

Query: 144 RILELGYGKEIEEILGFLGSRKDGGVSKENAFSKDSKPQRQNLLLSAT*NDKVNILSRSD 323
           RILELG+GKEIE+IL  LGSR    V K N  S  S  QRQNLLLSAT N+KVN L+   
Sbjct: 193 RILELGFGKEIEDILDLLGSRLTRSVGKGNRDSSISNYQRQNLLLSATLNEKVNHLANIS 252

Query: 324 L 326
           L
Sbjct: 253 L 253



 Score = 45.1 bits (105), Expect(4) = 3e-54
 Identities = 22/33 (66%), Positives = 24/33 (72%)
 Frame = +3

Query: 669 GLRFPNVTCIIQYDSPGEASEYVHRYL*TALFG 767
           GL  P VT IIQYD+PGEA+EYVHR   TA  G
Sbjct: 415 GLDLPKVTWIIQYDTPGEATEYVHRVGRTARMG 447


>ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 17-like [Vitis
           vinifera]
          Length = 600

 Score =  115 bits (289), Expect(3) = 3e-52
 Identities = 74/156 (47%), Positives = 94/156 (60%), Gaps = 23/156 (14%)
 Frame = +2

Query: 302 KHLKSIGSDVDDGSEFIGKLPNFSEADYNLPTQLIQRYVKVSCGSRLVILLSILRNLNER 481
           +H  S+  DVD+ SE + K+ + S  DY LP QL+QRYVKV CGSRLV+LLSIL++L ER
Sbjct: 270 EHFGSVEFDVDEDSEKLHKIISPSNGDYKLPAQLVQRYVKVPCGSRLVVLLSILKHLFER 329

Query: 482 EAASQKVVVFFSTC--VDFYPKL--------ELHQK----------KAFRLHGNMEHEGR 601
           E ASQK+VVFFSTC  VDF+  L         LH +          K F+LHGNM+HE R
Sbjct: 330 E-ASQKIVVFFSTCDAVDFHYSLFSAFLWPANLHPETEDRQMFLRFKTFQLHGNMKHEDR 388

Query: 602 RTAFQGL-KQRNQLYCCAQMLLRGA*ISK--CYMYY 700
           RT FQ   K+++ L     +  RG    K  C + Y
Sbjct: 389 RTTFQTFKKEKSALLLSTDVAARGLDFPKVRCIIQY 424



 Score = 73.2 bits (178), Expect(3) = 3e-52
 Identities = 36/43 (83%), Positives = 39/43 (90%)
 Frame = +1

Query: 19  TCELRLQVHEILQKLLHHFH*IVPGYVMGGESRSKEKARLRKG 147
           T EL +QV+EILQKLLH FH IVPGYVMGGE+RSKEKARLRKG
Sbjct: 114 TRELCMQVYEILQKLLHRFHWIVPGYVMGGENRSKEKARLRKG 156



 Score = 65.9 bits (159), Expect(3) = 3e-52
 Identities = 38/61 (62%), Positives = 47/61 (77%)
 Frame = +3

Query: 144 RILELGYGKEIEEILGFLGSRKDGGVSKENAFSKDSKPQRQNLLLSAT*NDKVNILSRSD 323
           RILELG+GKEIEEIL  LGSR +G   +E+A +  S+ QRQNLLLSAT N+KVN L++  
Sbjct: 192 RILELGFGKEIEEILDLLGSRTNGPTIREDAVT--SEFQRQNLLLSATLNEKVNHLAQIS 249

Query: 324 L 326
           L
Sbjct: 250 L 250


>ref|XP_003533799.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           17-like [Glycine max]
          Length = 596

 Score =  101 bits (252), Expect(3) = 2e-49
 Identities = 70/155 (45%), Positives = 89/155 (57%), Gaps = 22/155 (14%)
 Frame = +2

Query: 302 KHLKSIGSDVDDGSEFIGKLPNFSEADYNLPTQLIQRYVKVSCGSRLVILLSILRNLNER 481
           K L S  SD D   ++  K+P     DY +P QLIQRY+KV CGSRL +LLSIL++L ER
Sbjct: 267 KRLDSSESDEDSEDKYSSKVPTVG--DYKVPIQLIQRYMKVPCGSRLPVLLSILKHLFER 324

Query: 482 EAASQKVVVFFSTC--VDF------------YPKLELHQK-----KAFRLHGNMEHEGRR 604
           E  SQKVV+FFSTC  VDF            YP+ E  ++     K FRLHGNM+ E RR
Sbjct: 325 E-PSQKVVLFFSTCDAVDFHYSLLSEFQFSSYPQTEGVRQVFLGCKTFRLHGNMQQEDRR 383

Query: 605 TAFQGLK-QRNQLYCCAQMLLRGA*ISK--CYMYY 700
           T+FQ  K +++ L     +  RG    K  C + Y
Sbjct: 384 TSFQAFKTEKSALLLSTDVSARGLDFPKVRCIIQY 418



 Score = 72.0 bits (175), Expect(3) = 2e-49
 Identities = 35/43 (81%), Positives = 38/43 (88%)
 Frame = +1

Query: 19  TCELRLQVHEILQKLLHHFH*IVPGYVMGGESRSKEKARLRKG 147
           T EL LQV+EILQKLLH FH IVPGY+MGGE RSKEK+RLRKG
Sbjct: 109 TRELCLQVYEILQKLLHRFHWIVPGYIMGGEKRSKEKSRLRKG 151



 Score = 71.6 bits (174), Expect(3) = 2e-49
 Identities = 39/61 (63%), Positives = 45/61 (73%)
 Frame = +3

Query: 144 RILELGYGKEIEEILGFLGSRKDGGVSKENAFSKDSKPQRQNLLLSAT*NDKVNILSRSD 323
           RILELG+GK+IEEIL  LGSRK G   +EN     SK QRQNLLLSAT N+KVN L++  
Sbjct: 187 RILELGFGKDIEEILDLLGSRKKGHGDQENTVLTHSKIQRQNLLLSATLNEKVNHLAKMS 246

Query: 324 L 326
           L
Sbjct: 247 L 247