BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005436
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containi...    81   3e-13
emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]    79   1e-12
ref|XP_002523895.1| pentatricopeptide repeat-containing protein,...    75   2e-11
ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containi...    74   5e-11
ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containi...    69   9e-10

>ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 43/80 (53%), Positives = 57/80 (71%)
 Frame = -1

Query: 736 IQTEKNVEMLARESPQQDSDSSSIAYSKRIDELCNAGKFREASATLEEMVQKGIKVNSST 557
           +Q +KN  ++  E+  ++SDSSS+AYS+ I ELC  GK+++A     E  QKGI V+ ST
Sbjct: 700 LQLDKNETVVTSET-SEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKST 758

Query: 556 YISLMHGLIKRRKSISKMLR 497
           YI+LM GLIKRRKSISK  R
Sbjct: 759 YINLMDGLIKRRKSISKEAR 778


>emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 42/80 (52%), Positives = 56/80 (70%)
 Frame = -1

Query: 736 IQTEKNVEMLARESPQQDSDSSSIAYSKRIDELCNAGKFREASATLEEMVQKGIKVNSST 557
           +Q + N  ++  E+  ++SDSSS+AYS+ I ELC  GK+++A     E  QKGI V+ ST
Sbjct: 700 LQLDXNETVVTSET-SEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKST 758

Query: 556 YISLMHGLIKRRKSISKMLR 497
           YI+LM GLIKRRKSISK  R
Sbjct: 759 YINLMDGLIKRRKSISKEAR 778


>ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536825|gb|EEF38464.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 784

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 34/61 (55%), Positives = 49/61 (80%)
 Frame = -1

Query: 688 QDSDSSSIAYSKRIDELCNAGKFREASATLEEMVQKGIKVNSSTYISLMHGLIKRRKSIS 509
           Q+SD +S+ +S++I+ELC  GK+++A   ++E  QKGI ++ STYISLM GLIKRRKSIS
Sbjct: 719 QESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKRRKSIS 778

Query: 508 K 506
           +
Sbjct: 779 R 779


>ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 33/64 (51%), Positives = 51/64 (79%)
 Frame = -1

Query: 700 ESPQQDSDSSSIAYSKRIDELCNAGKFREASATLEEMVQKGIKVNSSTYISLMHGLIKRR 521
           E+ +   DS+S AY+K ++ LC +G+F+EA A L+EM+QKG+ V+SSTYI+LM GL+KR+
Sbjct: 720 ETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQ 779

Query: 520 KSIS 509
           K ++
Sbjct: 780 KRLT 783


>ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like, partial [Glycine max]
          Length = 594

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 37/85 (43%), Positives = 55/85 (64%)
 Frame = -1

Query: 757 EKDISEGIQTEKNVEMLARESPQQDSDSSSIAYSKRIDELCNAGKFREASATLEEMVQKG 578
           EK +S+  +T + V+    ++ Q+   SS I YS++I +LC  GK++EA    +E  QKG
Sbjct: 508 EKFMSKLSETGQAVK--THDTSQELDASSDIMYSQQISDLCTQGKYKEAMKLFQESEQKG 565

Query: 577 IKVNSSTYISLMHGLIKRRKSISKM 503
           + +N  TYI LM G +KRRKSISK+
Sbjct: 566 VSLNKYTYIKLMDGFLKRRKSISKV 590