BLASTX nr result

ID: Coptis23_contig00005434 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005434
         (1363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274734.1| PREDICTED: uncharacterized protein LOC100263...   168   3e-39
emb|CBI23698.3| unnamed protein product [Vitis vinifera]              167   8e-39
ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257...   165   2e-38
emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera]   165   2e-38
ref|XP_003536257.1| PREDICTED: RNA-binding protein Musashi homol...   165   3e-38

>ref|XP_002274734.1| PREDICTED: uncharacterized protein LOC100263471 [Vitis vinifera]
          Length = 441

 Score =  168 bits (426), Expect = 3e-39
 Identities = 87/131 (66%), Positives = 92/131 (70%)
 Frame = +1

Query: 1   KTKKIFVGGLPPTLTEEGFRQYFETYGSVTDVVVMYDQTTNRPRGFGFISFDTEDAVDRV 180
           KTKKIFVGGLP TLTEEGFRQYFETYG VTDVVVMYDQ T RPRGFGFISFDTEDAVDRV
Sbjct: 108 KTKKIFVGGLPSTLTEEGFRQYFETYGHVTDVVVMYDQNTQRPRGFGFISFDTEDAVDRV 167

Query: 181 LHKTFHELNGKMVEVKRALPKDANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMESNR 360
           LHKTFH+LNGK+VEVKRALPKDAN                              RM+ NR
Sbjct: 168 LHKTFHDLNGKLVEVKRALPKDAN-----PGGGGRSGGYQGYGASGANTSAYEGRMDGNR 222

Query: 361 YIQPQTAGSNF 393
           ++ PQT G  F
Sbjct: 223 FMPPQTTGGGF 233



 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 39/79 (49%), Positives = 53/79 (67%)
 Frame = +1

Query: 10  KIFVGGLPPTLTEEGFRQYFETYGSVTDVVVMYDQTTNRPRGFGFISFDTEDAVDRVLHK 189
           K+FVGG+P   TEE  ++YF  YG VT  V+M D+TT RPRGFGF+ F     +D VL +
Sbjct: 7   KLFVGGIPWDTTEEKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFADPSVLDAVLQE 66

Query: 190 TFHELNGKMVEVKRALPKD 246
             H ++G+ VE KRAL ++
Sbjct: 67  K-HTIDGRTVEAKRALSRE 84


>emb|CBI23698.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  167 bits (422), Expect = 8e-39
 Identities = 85/131 (64%), Positives = 93/131 (70%)
 Frame = +1

Query: 1   KTKKIFVGGLPPTLTEEGFRQYFETYGSVTDVVVMYDQTTNRPRGFGFISFDTEDAVDRV 180
           KTKKIFVGGLPPTL+EEGFRQYFE +G VTDVVVMYDQ+T RPRGFGF+SFDTEDAVDRV
Sbjct: 108 KTKKIFVGGLPPTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRV 167

Query: 181 LHKTFHELNGKMVEVKRALPKDANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMESNR 360
           L+KTFH+LNGK VEVKRALPKDAN                              RM+SNR
Sbjct: 168 LYKTFHDLNGKQVEVKRALPKDAN--------PGGGSRYQGYGASGGNPTTYDGRMDSNR 219

Query: 361 YIQPQTAGSNF 393
           Y+QPQ  G  F
Sbjct: 220 YMQPQNTGGGF 230



 Score = 74.7 bits (182), Expect = 5e-11
 Identities = 35/79 (44%), Positives = 53/79 (67%)
 Frame = +1

Query: 10  KIFVGGLPPTLTEEGFRQYFETYGSVTDVVVMYDQTTNRPRGFGFISFDTEDAVDRVLHK 189
           K+F+GG+    +E+  ++YF +YG V+  VVM D+ T RPRGFGF+ F     +DRVL +
Sbjct: 7   KLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDRVLQE 66

Query: 190 TFHELNGKMVEVKRALPKD 246
             H ++G+ VE KRAL ++
Sbjct: 67  K-HIIDGRTVEAKRALSRE 84


>ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257917 [Vitis vinifera]
          Length = 464

 Score =  165 bits (418), Expect = 2e-38
 Identities = 85/135 (62%), Positives = 93/135 (68%), Gaps = 4/135 (2%)
 Frame = +1

Query: 1   KTKKIFVGGLPPTLTEEGFRQYFETYGSVTDVVVMYDQTTNRPRGFGFISFDTEDAVDRV 180
           KTKKIFVGGLPPTL+EEGFRQYFE +G VTDVVVMYDQ+T RPRGFGF+SFDTEDAVDRV
Sbjct: 108 KTKKIFVGGLPPTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRV 167

Query: 181 LHKTFHELNGKMVEVKRALPKDAN----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRM 348
           L+KTFH+LNGK VEVKRALPKDAN                                  RM
Sbjct: 168 LYKTFHDLNGKQVEVKRALPKDANPGGGSRSMGGGAGAVAGGYQGYGASGGNPTTYDGRM 227

Query: 349 ESNRYIQPQTAGSNF 393
           +SNRY+QPQ  G  F
Sbjct: 228 DSNRYMQPQNTGGGF 242



 Score = 74.7 bits (182), Expect = 5e-11
 Identities = 35/79 (44%), Positives = 53/79 (67%)
 Frame = +1

Query: 10  KIFVGGLPPTLTEEGFRQYFETYGSVTDVVVMYDQTTNRPRGFGFISFDTEDAVDRVLHK 189
           K+F+GG+    +E+  ++YF +YG V+  VVM D+ T RPRGFGF+ F     +DRVL +
Sbjct: 7   KLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDRVLQE 66

Query: 190 TFHELNGKMVEVKRALPKD 246
             H ++G+ VE KRAL ++
Sbjct: 67  K-HIIDGRTVEAKRALSRE 84


>emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera]
          Length = 464

 Score =  165 bits (418), Expect = 2e-38
 Identities = 85/135 (62%), Positives = 93/135 (68%), Gaps = 4/135 (2%)
 Frame = +1

Query: 1   KTKKIFVGGLPPTLTEEGFRQYFETYGSVTDVVVMYDQTTNRPRGFGFISFDTEDAVDRV 180
           KTKKIFVGGLPPTL+EEGFRQYFE +G VTDVVVMYDQ+T RPRGFGF+SFDTEDAVDRV
Sbjct: 108 KTKKIFVGGLPPTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRV 167

Query: 181 LHKTFHELNGKMVEVKRALPKDAN----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRM 348
           L+KTFH+LNGK VEVKRALPKDAN                                  RM
Sbjct: 168 LYKTFHDLNGKQVEVKRALPKDANPGGGSRSMGGGAGAVAGGYQGYGASGGNPTTYDGRM 227

Query: 349 ESNRYIQPQTAGSNF 393
           +SNRY+QPQ  G  F
Sbjct: 228 DSNRYMQPQNTGGGF 242



 Score = 74.7 bits (182), Expect = 5e-11
 Identities = 35/79 (44%), Positives = 53/79 (67%)
 Frame = +1

Query: 10  KIFVGGLPPTLTEEGFRQYFETYGSVTDVVVMYDQTTNRPRGFGFISFDTEDAVDRVLHK 189
           K+F+GG+    +E+  ++YF +YG V+  VVM D+ T RPRGFGF+ F     +DRVL +
Sbjct: 7   KLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDRVLQE 66

Query: 190 TFHELNGKMVEVKRALPKD 246
             H ++G+ VE KRAL ++
Sbjct: 67  K-HIIDGRTVEAKRALSRE 84


>ref|XP_003536257.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Glycine max]
          Length = 471

 Score =  165 bits (417), Expect = 3e-38
 Identities = 85/132 (64%), Positives = 94/132 (71%), Gaps = 1/132 (0%)
 Frame = +1

Query: 1   KTKKIFVGGLPPTLTEEGFRQYFETYGSVTDVVVMYDQTTNRPRGFGFISFDTEDAVDRV 180
           +TKKIFVGGLPPTLTEE FRQYFE+YG+VTDVVVMYDQ T RPRGFGFISFDTEDAVDRV
Sbjct: 110 RTKKIFVGGLPPTLTEEKFRQYFESYGNVTDVVVMYDQNTGRPRGFGFISFDTEDAVDRV 169

Query: 181 LHKTFHELNGKMVEVKRALPKDAN-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMESN 357
           LHK+FH+LNGK VEVKRALPKDAN                               RM+S+
Sbjct: 170 LHKSFHDLNGKQVEVKRALPKDANPGASGRMMGGAGGGGYQGYGASGGNQNAYDGRMDSS 229

Query: 358 RYIQPQTAGSNF 393
           RY+QPQ+A   F
Sbjct: 230 RYMQPQSAAGGF 241



 Score = 64.3 bits (155), Expect = 7e-08
 Identities = 29/79 (36%), Positives = 49/79 (62%)
 Frame = +1

Query: 10  KIFVGGLPPTLTEEGFRQYFETYGSVTDVVVMYDQTTNRPRGFGFISFDTEDAVDRVLHK 189
           K+F+GG+    TE+  +++F  YG V    VM ++ T +PRGFGF+ F   + +DRVL  
Sbjct: 7   KLFIGGISWDTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNILDRVLED 66

Query: 190 TFHELNGKMVEVKRALPKD 246
             H ++G+ V+ K+A  ++
Sbjct: 67  K-HVIDGRTVDAKKAFSRE 84


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