BLASTX nr result

ID: Coptis23_contig00005418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005418
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318291.1| predicted protein [Populus trichocarpa] gi|2...   170   2e-56
gb|ADE76212.1| unknown [Picea sitchensis]                             168   6e-56
gb|EEE63194.1| hypothetical protein OsJ_18003 [Oryza sativa Japo...   171   7e-56
ref|XP_004156581.1| PREDICTED: coatomer subunit delta-like [Cucu...   169   7e-56
ref|XP_004137761.1| PREDICTED: coatomer subunit delta-like [Cucu...   169   7e-56

>ref|XP_002318291.1| predicted protein [Populus trichocarpa] gi|222858964|gb|EEE96511.1|
           predicted protein [Populus trichocarpa]
          Length = 529

 Score =  170 bits (431), Expect(2) = 2e-56
 Identities = 84/94 (89%), Positives = 93/94 (98%)
 Frame = +1

Query: 34  MVVLAASIITKSGKALVSRQYVDMSRIRIEGLLAAFPKLVGIGKQHTYVETENVRYVYQP 213
           MVVLAASI++K+GK LVSRQ+VDMSRIRIEGLLAAFPKL+GIGKQHTYVETENVRYVYQP
Sbjct: 1   MVVLAASIVSKNGKVLVSRQFVDMSRIRIEGLLAAFPKLIGIGKQHTYVETENVRYVYQP 60

Query: 214 IESLYLLIVTNKQSNILDDLDTLRLLSKLIPEYA 315
           IE+LYLL+VTNKQSNILDDL+TLRLLSKL+PEYA
Sbjct: 61  IEALYLLLVTNKQSNILDDLETLRLLSKLVPEYA 94



 Score = 73.9 bits (180), Expect(2) = 2e-56
 Identities = 36/41 (87%), Positives = 39/41 (95%)
 Frame = +2

Query: 380 SLDEEGIVKSAFELIFAADEVISLGHKESVTVAQVKQYCEM 502
           SLDEEGI ++AFELIFA DEVISLGHKE+VTVAQVKQYCEM
Sbjct: 96  SLDEEGICQTAFELIFAFDEVISLGHKENVTVAQVKQYCEM 136


>gb|ADE76212.1| unknown [Picea sitchensis]
          Length = 529

 Score =  168 bits (426), Expect(2) = 6e-56
 Identities = 83/94 (88%), Positives = 94/94 (100%)
 Frame = +1

Query: 34  MVVLAASIITKSGKALVSRQYVDMSRIRIEGLLAAFPKLVGIGKQHTYVETENVRYVYQP 213
           MVVLAASIITK+GKALVSRQ+VDMSRIRIEGLLAAFPKLVGIGKQHTYVETENVRYVYQP
Sbjct: 1   MVVLAASIITKTGKALVSRQFVDMSRIRIEGLLAAFPKLVGIGKQHTYVETENVRYVYQP 60

Query: 214 IESLYLLIVTNKQSNILDDLDTLRLLSKLIPEYA 315
           +E+LYLL+VTNKQSNIL+DL+TLR+LSK++PEY+
Sbjct: 61  MEALYLLLVTNKQSNILEDLETLRVLSKIVPEYS 94



 Score = 74.3 bits (181), Expect(2) = 6e-56
 Identities = 36/41 (87%), Positives = 38/41 (92%)
 Frame = +2

Query: 380 SLDEEGIVKSAFELIFAADEVISLGHKESVTVAQVKQYCEM 502
           SLDEEGI + AFELIFA DEVISLGHKESVT+AQVKQYCEM
Sbjct: 96  SLDEEGICRMAFELIFAFDEVISLGHKESVTIAQVKQYCEM 136


>gb|EEE63194.1| hypothetical protein OsJ_18003 [Oryza sativa Japonica Group]
          Length = 778

 Score =  171 bits (432), Expect(2) = 7e-56
 Identities = 85/96 (88%), Positives = 93/96 (96%)
 Frame = +1

Query: 28  INMVVLAASIITKSGKALVSRQYVDMSRIRIEGLLAAFPKLVGIGKQHTYVETENVRYVY 207
           + MVVLAASII+KSGKALVSRQ+VDMSRIRIEGLLAAFPKLVG GKQHTYVETENVRYVY
Sbjct: 253 LKMVVLAASIISKSGKALVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVY 312

Query: 208 QPIESLYLLIVTNKQSNILDDLDTLRLLSKLIPEYA 315
           QPIE LYLL++TNKQSNIL+DLDTLRLLSKL+PEY+
Sbjct: 313 QPIEGLYLLLITNKQSNILEDLDTLRLLSKLVPEYS 348



 Score = 71.6 bits (174), Expect(2) = 7e-56
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +2

Query: 377 PSLDEEGIVKSAFELIFAADEVISLGHKESVTVAQVKQYCEM 502
           PSLDEEG+ K+AFELIFA DE ISLG+KE+VTV QVKQYCEM
Sbjct: 349 PSLDEEGVCKTAFELIFAFDEAISLGNKENVTVQQVKQYCEM 390


>ref|XP_004156581.1| PREDICTED: coatomer subunit delta-like [Cucumis sativus]
          Length = 530

 Score =  169 bits (427), Expect(2) = 7e-56
 Identities = 84/94 (89%), Positives = 92/94 (97%)
 Frame = +1

Query: 34  MVVLAASIITKSGKALVSRQYVDMSRIRIEGLLAAFPKLVGIGKQHTYVETENVRYVYQP 213
           MVVLAASI++KSGK LVSRQ+VDMSRIRIEGLLAAFPKLVG GKQHTYVETENVRYVYQP
Sbjct: 1   MVVLAASIVSKSGKVLVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 60

Query: 214 IESLYLLIVTNKQSNILDDLDTLRLLSKLIPEYA 315
           IE+LYLL+VTNKQSNIL+DLDTLRLLSKL+PEY+
Sbjct: 61  IEALYLLLVTNKQSNILEDLDTLRLLSKLVPEYS 94



 Score = 73.6 bits (179), Expect(2) = 7e-56
 Identities = 35/41 (85%), Positives = 39/41 (95%)
 Frame = +2

Query: 380 SLDEEGIVKSAFELIFAADEVISLGHKESVTVAQVKQYCEM 502
           S+DEEGI K+AF+LIFA DEVISLGHKE+VTVAQVKQYCEM
Sbjct: 96  SMDEEGICKTAFDLIFAFDEVISLGHKENVTVAQVKQYCEM 136


>ref|XP_004137761.1| PREDICTED: coatomer subunit delta-like [Cucumis sativus]
          Length = 530

 Score =  169 bits (427), Expect(2) = 7e-56
 Identities = 84/94 (89%), Positives = 92/94 (97%)
 Frame = +1

Query: 34  MVVLAASIITKSGKALVSRQYVDMSRIRIEGLLAAFPKLVGIGKQHTYVETENVRYVYQP 213
           MVVLAASI++KSGK LVSRQ+VDMSRIRIEGLLAAFPKLVG GKQHTYVETENVRYVYQP
Sbjct: 1   MVVLAASIVSKSGKVLVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 60

Query: 214 IESLYLLIVTNKQSNILDDLDTLRLLSKLIPEYA 315
           IE+LYLL+VTNKQSNIL+DLDTLRLLSKL+PEY+
Sbjct: 61  IEALYLLLVTNKQSNILEDLDTLRLLSKLVPEYS 94



 Score = 73.6 bits (179), Expect(2) = 7e-56
 Identities = 35/41 (85%), Positives = 39/41 (95%)
 Frame = +2

Query: 380 SLDEEGIVKSAFELIFAADEVISLGHKESVTVAQVKQYCEM 502
           S+DEEGI K+AF+LIFA DEVISLGHKE+VTVAQVKQYCEM
Sbjct: 96  SMDEEGICKTAFDLIFAFDEVISLGHKENVTVAQVKQYCEM 136


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