BLASTX nr result

ID: Coptis23_contig00005414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005414
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280615.1| PREDICTED: ABC transporter I family member 1...   149   3e-34
emb|CAN67064.1| hypothetical protein VITISV_017541 [Vitis vinifera]   149   3e-34
ref|XP_003526864.1| PREDICTED: ABC transporter I family member 1...   146   2e-33
ref|XP_003602619.1| ABC transporter I family member [Medicago tr...   145   3e-33
ref|XP_002306244.1| predicted protein [Populus trichocarpa] gi|2...   144   7e-33

>ref|XP_002280615.1| PREDICTED: ABC transporter I family member 10, chloroplastic [Vitis
           vinifera]
          Length = 271

 Score =  149 bits (375), Expect = 3e-34
 Identities = 75/109 (68%), Positives = 87/109 (79%)
 Frame = +1

Query: 1   RPVQTLSGGQKQRVAIAGALAEACKVXXXXXXXXXXXXSDQIGVIKAVKNSLSGLEEVTA 180
           RPVQTLSGGQKQRVAIAGALAEACKV            +DQ+GVIKAVKNS+    EVTA
Sbjct: 161 RPVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDENDQVGVIKAVKNSVDSSGEVTA 220

Query: 181 LWVTHRLEELEYADGAVYMEDGKVIMHSDASSIRGFLKERISSYTDKIK 327
           LWVTHR+EELEYADGAVYMEDG+V+MH +A+SI  F+K R SSY +++K
Sbjct: 221 LWVTHRMEELEYADGAVYMEDGRVVMHGNAASIMDFVKARQSSYLNQLK 269


>emb|CAN67064.1| hypothetical protein VITISV_017541 [Vitis vinifera]
          Length = 1127

 Score =  149 bits (375), Expect = 3e-34
 Identities = 75/109 (68%), Positives = 87/109 (79%)
 Frame = +1

Query: 1    RPVQTLSGGQKQRVAIAGALAEACKVXXXXXXXXXXXXSDQIGVIKAVKNSLSGLEEVTA 180
            RPVQTLSGGQKQRVAIAGALAEACKV            +DQ+GVIKAVKNS+    EVTA
Sbjct: 1017 RPVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDENDQVGVIKAVKNSVDSSGEVTA 1076

Query: 181  LWVTHRLEELEYADGAVYMEDGKVIMHSDASSIRGFLKERISSYTDKIK 327
            LWVTHR+EELEYADGAVYMEDG+V+MH +A+SI  F+K R SSY +++K
Sbjct: 1077 LWVTHRMEELEYADGAVYMEDGRVVMHGNAASIMDFVKARQSSYLNQLK 1125


>ref|XP_003526864.1| PREDICTED: ABC transporter I family member 10, chloroplastic-like
           [Glycine max]
          Length = 266

 Score =  146 bits (368), Expect = 2e-33
 Identities = 74/108 (68%), Positives = 85/108 (78%)
 Frame = +1

Query: 1   RPVQTLSGGQKQRVAIAGALAEACKVXXXXXXXXXXXXSDQIGVIKAVKNSLSGLEEVTA 180
           R VQTLSGGQKQRVAIAGALAEACKV            +DQ+GVIKAV+NS+    EVTA
Sbjct: 157 RSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDEADQVGVIKAVRNSVDTSAEVTA 216

Query: 181 LWVTHRLEELEYADGAVYMEDGKVIMHSDASSIRGFLKERISSYTDKI 324
           LWVTHRLEELEYADGA+YMEDGKV+MH DA+SIR F++ R S+Y  +I
Sbjct: 217 LWVTHRLEELEYADGAIYMEDGKVVMHGDAASIRSFIEARQSAYITQI 264


>ref|XP_003602619.1| ABC transporter I family member [Medicago truncatula]
           gi|355491667|gb|AES72870.1| ABC transporter I family
           member [Medicago truncatula]
          Length = 265

 Score =  145 bits (366), Expect = 3e-33
 Identities = 74/108 (68%), Positives = 85/108 (78%)
 Frame = +1

Query: 1   RPVQTLSGGQKQRVAIAGALAEACKVXXXXXXXXXXXXSDQIGVIKAVKNSLSGLEEVTA 180
           R VQTLSGGQKQRVAIAGALAEACKV            +DQ+GVIKAV+N L   EEVTA
Sbjct: 156 RSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDETDQVGVIKAVRNCLDTSEEVTA 215

Query: 181 LWVTHRLEELEYADGAVYMEDGKVIMHSDASSIRGFLKERISSYTDKI 324
           LWVTHRLEELEYADGA+YMEDGKV+M  DA+SIR F++ R S+Y ++I
Sbjct: 216 LWVTHRLEELEYADGAIYMEDGKVVMQGDAASIRSFIEARQSAYINQI 263


>ref|XP_002306244.1| predicted protein [Populus trichocarpa] gi|222855693|gb|EEE93240.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  144 bits (363), Expect = 7e-33
 Identities = 73/108 (67%), Positives = 85/108 (78%)
 Frame = +1

Query: 1   RPVQTLSGGQKQRVAIAGALAEACKVXXXXXXXXXXXXSDQIGVIKAVKNSLSGLEEVTA 180
           RPVQTLSGGQKQRVAIAGALAEACKV            +DQ+GVIKAVKNSL+  ++VTA
Sbjct: 132 RPVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDETDQVGVIKAVKNSLNASDDVTA 191

Query: 181 LWVTHRLEELEYADGAVYMEDGKVIMHSDASSIRGFLKERISSYTDKI 324
           LWVTHRLEELEYADGA+YME+GKV+   D SSI  F++ R SSY ++I
Sbjct: 192 LWVTHRLEELEYADGALYMENGKVVKQGDGSSIMNFIEARQSSYINRI 239


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