BLASTX nr result

ID: Coptis23_contig00005399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00005399
         (847 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270718.2| PREDICTED: uncharacterized protein LOC100267...   269   7e-70
ref|XP_002515277.1| conserved hypothetical protein [Ricinus comm...   253   5e-65
ref|XP_002302769.1| predicted protein [Populus trichocarpa] gi|2...   238   2e-60
ref|XP_003553669.1| PREDICTED: uncharacterized protein LOC100820...   236   4e-60
ref|XP_002320294.1| predicted protein [Populus trichocarpa] gi|2...   236   4e-60

>ref|XP_002270718.2| PREDICTED: uncharacterized protein LOC100267467 [Vitis vinifera]
          Length = 284

 Score =  269 bits (687), Expect = 7e-70
 Identities = 137/266 (51%), Positives = 178/266 (66%), Gaps = 6/266 (2%)
 Frame = +2

Query: 68  KEVREPFYIFTXXXXXXXXXXXXXXXXXXXRAQYLLSSYPS----QSDSXXXXXXXYTNP 235
           K +RE F+I T                    A YLLS   +    Q  S       YTNP
Sbjct: 19  KMLRETFHILTVTLLSLLLPLSFLLLARLSIAHYLLSLGTNIAIPQPFSLVFSFFLYTNP 78

Query: 236 TLLHVLVSFVSITALLHGLTGRITLLKGSTSPIVQPGIYTAWILLCTLQVCVGLGIEGTI 415
           TLLH  VSF+S+  L+HGLTGR+ LL  +TS   QP +YTAWI LCTLQVCVGLGIE +I
Sbjct: 79  TLLHAFVSFISLATLVHGLTGRMALLSEATSQSFQPRLYTAWIFLCTLQVCVGLGIEVSI 138

Query: 416 AAGMWTIDDDVATKSMFLIRVIFLVGLHETTVCWSKAYVRPVVDDTVFGAMREEWWVERL 595
           AAG+ +    + ++   L RV+F +GLHET + WS+  V+PVVDDT+FGA REE W ER+
Sbjct: 139 AAGIESTS--LGSERSLLCRVVFFLGLHETMLHWSRTIVKPVVDDTIFGAAREERWGERV 196

Query: 596 VLGASFGALWWWRLRDEVEALLLVVQVKRGLFMGLGISDLVSWWLYYLTVTIGVVRLVRG 775
           V+ +S G LWWWRLRDEVE+L +V ++KR L MG+G++D V WWLYYLTVTIG+VR+V+G
Sbjct: 197 VMASSLGGLWWWRLRDEVESLAIVAEMKRELLMGVGVADFVGWWLYYLTVTIGMVRVVKG 256

Query: 776 LMWLGKVMFCRRQEE--SHCPCGNDE 847
           LMW+G V+ CRR+ E  +   CG+++
Sbjct: 257 LMWVGMVLLCRRKVEQTNGGSCGDED 282


>ref|XP_002515277.1| conserved hypothetical protein [Ricinus communis]
           gi|223545757|gb|EEF47261.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 287

 Score =  253 bits (645), Expect = 5e-65
 Identities = 137/291 (47%), Positives = 181/291 (62%), Gaps = 12/291 (4%)
 Frame = +2

Query: 11  MGWEKWRQSGERFFSAPILKEVREPFYIFTXXXXXXXXXXXXXXXXXXXRAQYLLS--SY 184
           MGW+ W+Q   +   A +     EPF++ T                      YLLS  S 
Sbjct: 1   MGWKNWQQKAAKELCAALT----EPFHLLTTTLLSILLPLSFLLLARLSCYSYLLSIASD 56

Query: 185 PSQSD--SXXXXXXXYTNPTLLHVLVSFVSITALLHGLTGRITLLKGSTSPIV-----QP 343
           P+Q +  S        +NP +L+ LVS  SI  LLHGLTGR  LL   +S +      + 
Sbjct: 57  PTQPEPSSLLFSFLLRSNPAILYFLVSIFSIATLLHGLTGRFNLLSYDSSSLAAGESQRH 116

Query: 344 GIYTAWILLCTLQVCVGLGIEGTIAAGMWTIDDDVATKSMFLIRVIFLVGLHETTVCWSK 523
            +YTAWILLCTLQVCVGLGIEG+IAAG+     D+  +   L R+IF +GLHET + WS+
Sbjct: 117 RLYTAWILLCTLQVCVGLGIEGSIAAGIDGHSFDI--EKSLLSRIIFFLGLHETMLYWSR 174

Query: 524 AYVRPVVDDTVFGAMREEWWVERLVLGASFGALWWWRLRDEVEALLLVVQVKRGLFMGLG 703
             V+PVVDDTVFG  R+E WV+R+ L  S G+LWWWRLRDEVE+L++V + KR + MG+G
Sbjct: 175 TVVKPVVDDTVFGFGRDEKWVQRVSLAMSLGSLWWWRLRDEVESLVIVAEAKREMSMGVG 234

Query: 704 ISDLVSWWLYYLTVTIGVVRLVRGLMWLGKVMFCRRQ---EESHCPCGNDE 847
           ++DL+ WWLYYLTVTIG+VR+V+GLMW+  ++ CRR      S  PCG D+
Sbjct: 235 MADLLGWWLYYLTVTIGMVRIVKGLMWVMMILLCRRVRRINNSPHPCGIDD 285


>ref|XP_002302769.1| predicted protein [Populus trichocarpa] gi|222844495|gb|EEE82042.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score =  238 bits (606), Expect = 2e-60
 Identities = 127/285 (44%), Positives = 171/285 (60%), Gaps = 6/285 (2%)
 Frame = +2

Query: 11  MGWEKWRQ--SGERFFSAPILKEVREPFYIFTXXXXXXXXXXXXXXXXXXXRAQYLLS-- 178
           MGW+K  +  SG   F        REPF++ T                      Y+L+  
Sbjct: 1   MGWQKKEKKLSGCAIF--------REPFHVVTITLLSLLLPLSFLLLARLSSYNYMLTIT 52

Query: 179 SYPSQSD--SXXXXXXXYTNPTLLHVLVSFVSITALLHGLTGRITLLKGSTSPIVQPGIY 352
           S P+Q    S         NP++L  LVS VSI  L+HGL GR TLL  S   I +PG+Y
Sbjct: 53  SDPTQQSPSSFILSLLLSINPSILCFLVSIVSIATLIHGLAGRTTLLSESPGVIYRPGLY 112

Query: 353 TAWILLCTLQVCVGLGIEGTIAAGMWTIDDDVATKSMFLIRVIFLVGLHETTVCWSKAYV 532
           TAWI+LCTLQ+CVGLGIEG+IAAG++       T+   L R IF +GLHET + WS+  V
Sbjct: 113 TAWIVLCTLQICVGLGIEGSIAAGIFD-GSGFDTRRGLLCRYIFFLGLHETMIHWSRTVV 171

Query: 533 RPVVDDTVFGAMREEWWVERLVLGASFGALWWWRLRDEVEALLLVVQVKRGLFMGLGISD 712
           +PVVDDT++GA  +E W +R+ +  S+G LWW  +RDEVE+L+ V + K  L M LG++D
Sbjct: 172 KPVVDDTIYGAAGDEKWAQRVTIALSYGTLWWLSIRDEVESLVFVAEAKIELSMDLGVAD 231

Query: 713 LVSWWLYYLTVTIGVVRLVRGLMWLGKVMFCRRQEESHCPCGNDE 847
           LV WWLYYLTVTIG+VR+V+ L+W+G ++ C+R   +      DE
Sbjct: 232 LVGWWLYYLTVTIGMVRVVKSLIWIGAILLCKRVRRNSTETCEDE 276


>ref|XP_003553669.1| PREDICTED: uncharacterized protein LOC100820518 [Glycine max]
          Length = 292

 Score =  236 bits (603), Expect = 4e-60
 Identities = 114/206 (55%), Positives = 154/206 (74%), Gaps = 9/206 (4%)
 Frame = +2

Query: 224 YTNPTLLHVLVSFVSITALLHGLTGRITLLK---GSTSPIVQPGIYTAWILLCTLQVCVG 394
           + NP +L+VLVS +S+ +L+HGLTG+I +L     S+S  +QP I TAWI+LCT QVCVG
Sbjct: 67  HINPLILYVLVSIISMASLIHGLTGKIIILSDSLSSSSTFLQPRILTAWIVLCTFQVCVG 126

Query: 395 LGIEGTIAAGMWTIDDD-----VATKSMFLIRVIFLVGLHETTVCWSKAYVRPVVDDTVF 559
           LGIEG+I AG++  +D+        + + L RV+FL+GLHET   W++  VRPVVDDTVF
Sbjct: 127 LGIEGSIEAGLYDSNDESMSFKFGVERILLSRVVFLLGLHETMQVWARMVVRPVVDDTVF 186

Query: 560 G-AMREEWWVERLVLGASFGALWWWRLRDEVEALLLVVQVKRGLFMGLGISDLVSWWLYY 736
           G A REE WVER+V+ AS GALWWWRLR++VE+L+++V+ K    M + +SD V WWLYY
Sbjct: 187 GVAAREEKWVERVVVAASLGALWWWRLREDVESLVVMVEAKTEQLMDVRVSDFVGWWLYY 246

Query: 737 LTVTIGVVRLVRGLMWLGKVMFCRRQ 814
           LT+TIG+VR++RGLMW+  V  CRR+
Sbjct: 247 LTLTIGIVRVLRGLMWMVTVCLCRRR 272


>ref|XP_002320294.1| predicted protein [Populus trichocarpa] gi|222861067|gb|EEE98609.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score =  236 bits (603), Expect = 4e-60
 Identities = 108/194 (55%), Positives = 147/194 (75%)
 Frame = +2

Query: 230 NPTLLHVLVSFVSITALLHGLTGRITLLKGSTSPIVQPGIYTAWILLCTLQVCVGLGIEG 409
           N  +L+ LVS VS+  L+HGLTG+ITLL  ST    +PG+YTAWI+LCTLQ+CVGLG++ 
Sbjct: 72  NTAVLYFLVSVVSVATLIHGLTGKITLLSESTGATYRPGLYTAWIMLCTLQICVGLGVQR 131

Query: 410 TIAAGMWTIDDDVATKSMFLIRVIFLVGLHETTVCWSKAYVRPVVDDTVFGAMREEWWVE 589
           +++AGM+        +S FL RVIF +GLHET + WS+  V+PVVDDT+FGA R+E W +
Sbjct: 132 SVSAGMFDGYGFDIQRS-FLSRVIFFLGLHETMIHWSRTVVKPVVDDTIFGAARDEKWEQ 190

Query: 590 RLVLGASFGALWWWRLRDEVEALLLVVQVKRGLFMGLGISDLVSWWLYYLTVTIGVVRLV 769
           R+ +  S G LWWWRLR+EVE+L+ V + K  L M L ++D+V WWLYYLTVTIG+VRLV
Sbjct: 191 RVAVALSCGTLWWWRLRNEVESLVFVAEAKIELLMDLAVADMVGWWLYYLTVTIGMVRLV 250

Query: 770 RGLMWLGKVMFCRR 811
           +GL+W+G ++ C+R
Sbjct: 251 KGLIWVGVILLCKR 264


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